Naegleria gruberi: NAEGRDRAFT_74647
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Entry
NAEGRDRAFT_74647 CDS
T01241
Name
(RefSeq) dead box RNA helicase
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngr03400
]
NAEGRDRAFT_74647
Enzymes [BR:
ngr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NAEGRDRAFT_74647
DNA repair and recombination proteins [BR:
ngr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NAEGRDRAFT_74647
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_19
DEXQc_Suv3
AAA
PhoH
Helicase_PWI
AAA_11
Rpn9_C
Motif
Other DBs
NCBI-GeneID:
8857449
NCBI-ProteinID:
XP_002670349
JGI:
Naegr1_74647
UniProt:
D2VZX0
LinkDB
All DBs
AA seq
2295 aa
AA seq
DB search
MFSNKDNDPLAVIDRLLPRSSGSRSLSYLNSQEEFNSNFDVLISPPRLSNTIREKTIGSN
TLQLFDETTSYYELFPIIENKRKKNTSDDLLKFGITWESFVKPKISFKNANQHNKDFDRR
IEEQNGKNLLEKFLTMLQEQLRLDQISSNKYGVASGLSKQQVACLIAKQLYIAKRKFKNT
LSVKSVFKDLQNMGIGLSLDPKTQKLEQIVKEVHILKVLEHLEKLMDWIDRYAKPNLAEE
EAKRYGKVERLIIGTGESKNTNTYFSTGTEKDNDEYDDEALVIDENIEFGSADDITNADH
LHNQFRNISIFSRSQLENVLDQTNLFSFTAPTENVEEEEEEEEESVLSSMYTVDWLEKEA
RKICKTPGIENIVLDILQKKGQDAVQLQSRLFDALGENAFELMSIIMEHKSEILADLYRM
QMADNAVEGINSFSHVKMTTSKFKDAQKKLKKEGRKIGRKNQTKFNLSGGNSENELNELK
SLYQTFKKEKDRNVLKAGEGESRVLVLGRDVIPESNNEADKETQERVIRQPTYEEHVFPA
PKKREDNTPLVPISIFEDWAQLAFKGYTHLNRVQSDVFYSAYKTSENMLVCAPTGCGKTN
IAMMTVLREIGQHFKGGKIRREEFKIIYIAPMKALAAEMVENFSKRLAPLGITVKEMTGD
MQLTKREVQQTQMIVTTPEKWDVTTRKASDQALIQLTRLIIIDEVHLLNEDRGPVIESIV
ARTLRQVETTQSMIRLVGLSATLPNYMDVANFLRVDPHSGLHFFDGSYRPVPLEQSFIGV
SIRNPIARNKEYNQIAFNRTLKNLKREKQVMVFVHSRKETSTTAKALIDLAVEENALDML
TAGVKMSEHTRKWVTKSLEKCHNRELKELVPKGLGIHHAGLVRSDRNLVEKLFSEGIIRV
LCCTSTLAWGVNLPSYCCIIKGTEVYNAEKSTMTELGMLDIMQIFGRAGRPQFDVEGEGV
IITSYEVLPRYLNLLKRNLPIESQMTQDLANHLCAEIVLGTVSNVREGCLWLNYTYLFLR
MRQNPMNYGILPEEVKLDPSLIGMRKSLIEKACKMLQESKMIIYDERTGVVSATDLGRIA
SHFYIHYETIQLYNEKLHPKMSESDVLHIVASAREFKNIKVREDESEELAELSANAPVKV
TKGQDEFTGKVNLLIQSYISHVKIKNSSLISDCAFIIQSVGRIIRAIFEIAIKERWSSLV
DKLLTLTKCMERRQWVFEHPLRQMSKIPTFALQKLENKNLTLSKLVEYEESELDQVLNVR
GMGRIIMEHIDRFPHLDLEANVQPITRNVLRFQVKIRPNFTWDKKLHGETEPWWIWVEDE
NSEFIYHSEYFLLKHDEYEKMMKESRDDEEGPCYSLNFVVPFREDPRPLYFIIRAVSDKW
ISAEAQITVNIKDIILPEGFAPSTPILPLDPLPITCLNNPEYEKLYADKGIKYFNPVQTQ
IFHMTYHTDENILIGAPTGSGKTLAAELCIFRLFNTKPNQKVIYIAPLKALVRERLVEWE
KKFVQKLGKKMVELTGDFTPDVKLLKEADIVITTPEKWDGISRNWQNRSYVRDVGLIVMD
EIHLLGSGRGAILEVITSRMRYISWNTQTHIRLMGLSTNMANATDLADWLGVGQRGLFNF
KSSVRPVPLQISISGFSGKNYCPRMNSMNKPAYQAILRHSNNKPCLIFVSSRRQTRLTAM
DLIGYCSADENPHRFLRMDQNEVISALELARDTHLKQFLQYGIGIHHAGLTPSDKKLVEE
LFHSGKIQVLVATSTLAWGVNLPAYFVIIKGTEFFEPSTKRYEDYPLVDVLQMAGRSGRP
GFDTEGRVFIMVHDIKKNFYKRFLYEPFPIESSLHTQLHDHINAEIVSGTIKTKQDCLDY
LTWTFMFRRLVQNPCYYGIEDLSYEGLNKWLSTKITSIIDDLEYAGLVKAIDLNLDKKKR
WEVMASQTQSSTFGTMTAEKEKAEKEIQKAKGIYLEPTATGIIASFYYLSYRTASHFNRL
IKADSNVNYLLELLCEAKEFAEIPVRHNEDKLNKELSEVVPLGVYMHDYESPHIKCYLLL
QAHFERVKLPIVDYITDTRTILDSTIRISQSYIDICAEKGYLQPTINMMHILQMIMQARW
ATDSTLYQLFSNLQCPRENTESSSEDIHNFIQNLAQKENVTGLKQLLDVKYQQGESALQK
LISKYLRKNNLVSNLMKIVEEFPYLTVKIDKVTHDEEDHQLEVSVNIERLSKPKEQAYTP
MYTKQKDEGFWLIVSNPQNNELLALKRVRANRKFNRTEVYLPVSENDKELEAIVVPDCYL
GLDVSSKFLCKIQTK
NT seq
6888 nt
NT seq
+upstream
nt +downstream
nt
atgttctctaacaaagataatgatcccttggctgtgatcgatagacttttacctcgttca
tcaggttctagaagtttgtcctatctaaatagtcaagaggaatttaattctaattttgat
gttttaatttcaccacctcgtttatccaacactattcgtgagaaaaccatcggaagcaat
actctccaattatttgatgagactacctcgtattatgaactcttcccaattattgaaaat
aagagaaagaagaatacatctgatgatttattaaaatttggtattacttgggaaagtttt
gttaaaccaaagattagctttaagaatgctaatcaacacaacaaggattttgatcgtaga
attgaagaacaaaacggaaagaatttgttagaaaagtttttaaccatgttgcaagaacaa
ttgagattggatcaaatttcatccaacaagtatggtgttgctagtggactttctaaacaa
caagttgcttgtttgattgctaaacaactttatattgctaagagaaagtttaaaaacact
ttatctgttaagagtgttttcaaagatttacaaaatatgggtattggcttgtcacttgat
ccaaagacacaaaagttggaacaaattgtcaaggaagttcacattttgaaagttttggaa
catttggaaaagttaatggattggattgacagatatgccaaaccaaacttggcagaagaa
gaagccaaaagatatggtaaagttgaaagacttattatcggaactggtgaatcaaagaat
actaatacatacttttccactggtacagaaaaagataatgatgaatatgatgatgaagct
ctagtaattgatgaaaatattgaatttggttctgctgatgatattactaatgcagaccat
ttgcataatcaatttagaaatattagtatcttctctagatcccaattggaaaatgtttta
gaccaaactaatctattctccttcactgcaccaacagaaaatgttgaagaagaggaggaa
gaagaagaagaatctgttctttcttccatgtatactgttgattggttggaaaaggaagcc
agaaagatttgcaagacaccaggtattgaaaatattgttttggatattttacaaaagaag
ggacaagatgctgttcaattacaatctcgcttattcgatgctcttggagaaaatgctttc
gaattaatgtcaattatcatggaacataagtcagaaattttggctgatttgtatagaatg
caaatggcagataatgctgttgaaggtattaactcattctctcatgtaaagatgacaaca
tccaagttcaaggatgctcaaaagaagctcaagaaggaaggtagaaaaattggtagaaag
aatcaaaccaagtttaacctttcaggaggaaactctgaaaatgagttgaatgaactcaaa
tcactctatcaaaccttcaagaaggaaaaggatagaaatgttctcaaggctggtgaagga
gaatctagagtacttgttctcggaagagatgttattccagagtccaataatgaggctgat
aaagaaactcaagaaagagttatcagacaaccaacttatgaagaacacgtcttccctgct
ccaaagaaacgtgaagataacacaccacttgttccaatttctatatttgaagattgggct
caacttgcattcaaaggttatactcacctcaatcgtgtacaatctgatgttttctattct
gcttataaaactagtgaaaacatgttggtttgtgctccaacaggttgcggtaagacaaat
attgcaatgatgacagttttgagagaaattggccaacactttaagggaggaaagattaga
cgtgaagaattcaagattatctatattgctccaatgaaagctttggcagctgaaatggtt
gaaaacttctccaagagacttgcaccacttggcattacagtaaaagaaatgactggtgat
atgcaattgacaaagagagaagtacaacaaactcaaatgattgttactactcctgaaaag
tgggacgtaacaaccagaaaagcctctgatcaagctttaattcaattgactagattgatc
attattgacgaagttcacttgttgaatgaagacagaggtccagttattgaatctattgtt
gctagaactttaagacaagttgaaacaacacaaagtatgattcgtttggttggtttatct
gctactttaccaaattatatggatgttgctaacttcctcagagttgatcctcattccgga
ttgcacttctttgatggatcctatagacctgttccacttgaacaaagttttattggtgtc
agtattagaaatccaattgctagaaataaggaatacaatcaaattgccttcaatagaacc
ttgaagaatttgaagagagaaaaacaagtcatggttttcgttcactccagaaaggaaact
tccactactgccaaagctttaattgatttggcagttgaagaaaatgctcttgatatgctc
actgctggagttaaaatgagtgaacataccagaaagtgggtaactaaatcattagaaaag
tgtcacaatagagaattgaaagaattggtaccaaaaggtctcggtattcaccatgctggt
ttagttagatcagacagaaatcttgttgaaaagctcttttctgaaggtattattagagtt
ttatgttgtacctctacactcgcttggggtgtcaacttgccatcatattgttgtattatt
aagggtaccgaagtttataatgctgaaaagagtaccatgactgaacttggaatgttggat
attatgcaaattttcggtcgtgctggtagacctcaatttgacgttgaaggtgaaggtgtt
attattactagttatgaagttttacctcgttacctcaacttgttaaagagaaatttacca
atcgaatcacaaatgacacaagatttggctaaccacttgtgtgctgaaattgttttgggt
acagtgtccaatgtcagagaaggttgtttatggttgaattatacttacctcttcttgaga
atgagacaaaacccaatgaattatggtattttacctgaggaagtcaagctcgatccttca
ttgattggtatgagaaagagtcttattgaaaaggcctgtaagatgttacaagaaagcaag
atgattatctacgacgaaagaactggtgttgtttctgcaactgatttgggtcgtatcgcc
tctcacttctatattcactacgaaacaattcaattgtacaatgaaaagctccatccaaag
atgtccgaatctgatgttctccacatagttgctagtgccagagagttcaagaatatcaag
gttagagaagatgaatctgaagaacttgctgaattatcagccaatgcaccagttaaagtt
acaaagggacaagatgaattcactggaaaggtaaatttgttgattcaaagttacatttcc
catgttaagattaagaattcatctctcatttccgattgtgcctttattattcagagtgtt
ggtagaattattagagcaatctttgaaattgctatcaaggaacgttggtcatctttagtt
gacaaacttttaaccttgacaaaatgtatggaaagaagacaatgggtatttgaacatcca
ctcagacaaatgtcaaagattccaacctttgccttgcaaaaacttgaaaacaagaatttg
accctctccaaattagttgaatatgaagaatccgagttggatcaagtattgaatgttaga
ggaatgggtagaattattatggaacatattgatagattccctcacttggatttggaagct
aacgttcaaccaattacaagaaatgttcttcgtttccaagttaaaatcagaccaaacttt
acttgggacaagaaattgcacggagaaacagagccttggtggatttgggttgaagatgaa
aactctgaattcatctatcactctgagtacttcttgttaaagcatgatgaatatgaaaag
atgatgaaagaatcaagagatgacgaagaaggaccatgctattctctcaactttgttgtt
cctttcagagaagatccaagacctctctattttattattagagcagtttctgacaagtgg
attagtgcagaagcacaaattaccgtcaatattaaggatattattttaccagaaggtttt
gctccaagcactccaattctcccattggatcctcttccaatcacctgcttgaacaatcct
gaatatgaaaagttatatgctgataagggtatcaaatatttcaaccctgtacaaacacaa
attttccacatgacataccatactgatgaaaatattcttattggtgcaccaacaggttct
ggtaagacacttgctgctgaattgtgtatctttagattgttcaatactaaaccaaatcaa
aaggttatttatattgctcctcttaaggcccttgttagagaaagacttgttgaatgggaa
aagaagtttgttcaaaagttaggcaagaaaatggtcgaattaactggtgatttcactcct
gatgttaaattattgaaggaagctgatattgttattacaactcctgaaaagtgggacggt
atttctcgtaactggcaaaatcgttcctatgtcagagatgttggtttgattgtcatggac
gaaattcacttgcttggcagtggaagaggtgctattttagaagtcattacatctcgtatg
agatatatttcttggaacactcaaactcacattcgtttgatgggtctcagtacgaacatg
gctaatgctactgacttggccgattggttgggtgttggacaaagaggtttgttcaacttt
aagagttctgtaagacctgttcctttacaaattagtatttctggattcagtggtaagaac
tattgtccaagaatgaattctatgaataagccagcttatcaagcaattttgagacactcc
aacaacaaaccttgtttgattttcgtttcttccagaagacaaaccagattgacagcaatg
gatttgattggttattgttctgctgatgaaaatcctcacagattcttgagaatggaccaa
aatgaagttattagtgctttggaacttgctcgtgacactcacctcaaacaattcttacaa
tatggtattggtattcaccatgctggtcttactccatcagacaaaaaactcgttgaagaa
cttttccactctggtaagattcaagtccttgttgctactagtactttggcttggggtgtc
aacttgccagcatactttgtcattatcaaaggtactgaattttttgaaccatccacaaag
agatatgaagattatccacttgttgatgtattacagatggctggtcgttctggtcgtcca
ggtttcgatactgaaggtagagttttcatcatggttcacgatattaagaagaatttctac
aagagattcctctatgaaccattcccaattgaatcaagtttgcatactcaattgcatgac
cacatcaatgcggaaattgtttcaggaactatcaagaccaaacaagattgtttggactat
ttaacttggactttcatgttccgtcgtcttgtccaaaatccatgctattatggtattgaa
gatttgtcctatgaaggattgaacaagtggttatctactaagattaccagtattattgat
gacttggaatatgctggacttgttaaagctattgatttgaatcttgataagaagaaacgt
tgggaagttatggcttctcaaacacaatcatcaacctttggtactatgacagctgagaag
gaaaaggctgaaaaggaaatccaaaaggccaagggaatttatttggaaccaacagcaact
ggtattattgccagtttctattatttgtcatatagaactgcttctcatttcaacagactc
atcaaggctgattctaacgttaactacttgttagaacttctctgtgaagctaaggaattt
gctgaaatccctgtcagacataatgaagacaagttgaataaggaattgagtgaagttgtt
cctcttggagtttacatgcacgactatgaatctccacacattaagtgttatttactttta
caagctcactttgaaagagtcaagcttccaattgtcgactacattactgatactagaaca
attttagattctaccatccgtatttctcaatcctatattgatatctgtgccgaaaaggga
tacttgcaaccaacaattaacatgatgcacattttgcaaatgatcatgcaagccagatgg
gcaacagattcaaccctctatcaattgttcagtaatttgcaatgtccacgtgaaaatact
gaaagttcttcagaagatattcacaactttattcaaaacttagctcaaaaggaaaatgtc
actggtctcaagcaattgttggatgttaaatatcaacaaggcgagtctgctttgcaaaaa
ttgatttccaaatatttgagaaagaacaacttagtatccaatctcatgaagattgttgaa
gaattcccatatttaactgtaaagattgacaaggttactcacgatgaagaagatcaccaa
cttgaagtttctgtcaacattgaaagattaagcaaaccaaaagaacaagcttacacacca
atgtataccaaacaaaaggatgaaggattctggttgattgtttctaaccctcaaaacaat
gaattattagctctcaagagagtaagagcaaacagaaaattcaatcgtactgaagtttat
cttccagtctctgaaaatgataaggaattggaagctattgttgttcctgattgctatctt
ggtttagatgtttcttctaaattcttgtgtaagattcaaactaaataa
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integrated database retrieval system
