Naegleria gruberi: NAEGRDRAFT_75227
Help
Entry
NAEGRDRAFT_75227 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngr03009
]
NAEGRDRAFT_75227
04121 Ubiquitin system [BR:
ngr04121
]
NAEGRDRAFT_75227
Ribosome biogenesis [BR:
ngr03009
]
Eukaryotic type
90S particles
Other 90S particles
NAEGRDRAFT_75227
Ubiquitin system [BR:
ngr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
NAEGRDRAFT_75227
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Sof1
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
eIF2A
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
WD40_like
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
8857118
NCBI-ProteinID:
XP_002669837
JGI:
Naegr1_75227
UniProt:
D2W1H9
LinkDB
All DBs
AA seq
517 aa
AA seq
DB search
MVKIKTISRDDDTHTRQTSYETTRHFSDPNPELIHRFEKPREYMRAMNAAKIDNIYAKPF
LADLSGHADTPTTICTDPNSLIHILSGSCDGQIRVWDLTERKTIYAIDRAHNGFVNGIVI
PPYRHSSDSSENSYYFSVGTDKHLKRWELNLKVANVNAFQASTQLGSIGYTTADYIGKSN
SGVKLPSYATPLQDVVAHNALLCIDHHYSDPIVVTSGHEYIHIWDCSGHSSSSLIPGGTS
RLICKQEYELSTSTETIYSVKFNKVEKNLIAYCARDRTVGLYDMRTNQMIRAVTMQTKSN
KVCWNPMNPFHFSAANEDGNVYTFDMRILEKGPLMMHSGHINAVLDVDYNPSGTEIVTAG
YDKSVRIFKTDSTSYKAREVYHTKRMQRVFTVKYSGDGRYIYSGSDDQSIRIWKNERSAP
LRGGGLSKKEQAQIEYNQKLIERYKNVEDVRKIAAHRHLPHRIKTQSKEMQKEREAEERR
EKVRERFTKKKDDKKNSMSAKIEKVKTMRKRFLKVNE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaaataaagacaatatcaagagatgacgatactcacactcgtcagacaagttat
gaaactacaagacacttttccgatccaaatccggaacttattcatcgttttgaaaaacca
agagaatatatgagagctatgaatgctgccaagattgataatatttatgctaaacctttt
cttgcagatttatctggacatgctgatacaccaacaactatttgtacagatcctaattca
cttattcacattctttcgggaagttgtgatgggcaaattcgtgtttgggatttgactgaa
cgtaaaacaatttatgcaattgatagagctcacaatggatttgttaatggaattgttatt
ccaccatatagacattcatctgattcatcagaaaattcatattatttctctgtaggaact
gataaacatttgaaacgatgggaattgaatttgaaagttgctaatgtaaatgctttccaa
gcaagtacacaattaggaagtattggatacacaacagctgattatattggaaaatcaaat
agtggtgtgaaattaccatcatatgcaacgcctttacaagatgttgtggcacataatgct
ttactctgtattgaccatcactattctgatcctattgtagttactagtggtcacgaatat
attcacatttgggattgttctggacattcttcatctagtttaattcctggaggtacatcg
agattgatctgtaaacaagaatatgaactttcaacatctactgaaactatttacagtgtt
aaatttaataaggttgaaaagaatttgattgcttattgtgccagagatagaactgttggt
ttatatgatatgagaactaatcaaatgattcgtgctgtgacaatgcaaactaaatcaaat
aaggtttgttggaatccaatgaatccattccatttctctgctgccaatgaagatggtaat
gtatatacttttgatatgagaattttagaaaagggaccattgatgatgcattctggtcac
attaatgcagttttggatgttgactataatccttcaggtacagaaattgtaactgctggt
tatgataagtccgttcgtattttcaaaacagatagtacaagttataaggctcgtgaagtt
tatcacacaaagagaatgcaacgtgtattcactgttaaatattctggtgatggtagatat
atttatagtggaagtgacgatcaatctattcgtatttggaagaatgaaagaagtgctcca
ctcagaggaggtggtttatcaaagaaggaacaagcacaaattgaatacaaccaaaagctt
attgaacgttacaagaatgttgaagatgtcagaaagattgccgcacacagacatttacct
cacagaatcaagactcaatcaaaggaaatgcaaaaggaacgtgaagcagaagaaagaaga
gaaaaggtcagagaaagattcacaaagaagaaggatgataagaagaactcaatgtctgcc
aagattgaaaaggtcaagacaatgagaaagagattcttaaaggttaacgagtaa
DBGET
integrated database retrieval system