KEGG   Naegleria gruberi: NAEGRDRAFT_75227
Entry
NAEGRDRAFT_75227  CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
ngr  Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ngr03009]
    NAEGRDRAFT_75227
   04121 Ubiquitin system [BR:ngr04121]
    NAEGRDRAFT_75227
Ribosome biogenesis [BR:ngr03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    NAEGRDRAFT_75227
Ubiquitin system [BR:ngr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     NAEGRDRAFT_75227
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Sof1 WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR75_1st eIF2A Beta-prop_IFT122_1st WDR90_beta-prop_4th WD40_like Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 8857118
NCBI-ProteinID: XP_002669837
JGI: Naegr1_75227
UniProt: D2W1H9
LinkDB
AA seq 517 aa
MVKIKTISRDDDTHTRQTSYETTRHFSDPNPELIHRFEKPREYMRAMNAAKIDNIYAKPF
LADLSGHADTPTTICTDPNSLIHILSGSCDGQIRVWDLTERKTIYAIDRAHNGFVNGIVI
PPYRHSSDSSENSYYFSVGTDKHLKRWELNLKVANVNAFQASTQLGSIGYTTADYIGKSN
SGVKLPSYATPLQDVVAHNALLCIDHHYSDPIVVTSGHEYIHIWDCSGHSSSSLIPGGTS
RLICKQEYELSTSTETIYSVKFNKVEKNLIAYCARDRTVGLYDMRTNQMIRAVTMQTKSN
KVCWNPMNPFHFSAANEDGNVYTFDMRILEKGPLMMHSGHINAVLDVDYNPSGTEIVTAG
YDKSVRIFKTDSTSYKAREVYHTKRMQRVFTVKYSGDGRYIYSGSDDQSIRIWKNERSAP
LRGGGLSKKEQAQIEYNQKLIERYKNVEDVRKIAAHRHLPHRIKTQSKEMQKEREAEERR
EKVRERFTKKKDDKKNSMSAKIEKVKTMRKRFLKVNE
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggtcaaaataaagacaatatcaagagatgacgatactcacactcgtcagacaagttat
gaaactacaagacacttttccgatccaaatccggaacttattcatcgttttgaaaaacca
agagaatatatgagagctatgaatgctgccaagattgataatatttatgctaaacctttt
cttgcagatttatctggacatgctgatacaccaacaactatttgtacagatcctaattca
cttattcacattctttcgggaagttgtgatgggcaaattcgtgtttgggatttgactgaa
cgtaaaacaatttatgcaattgatagagctcacaatggatttgttaatggaattgttatt
ccaccatatagacattcatctgattcatcagaaaattcatattatttctctgtaggaact
gataaacatttgaaacgatgggaattgaatttgaaagttgctaatgtaaatgctttccaa
gcaagtacacaattaggaagtattggatacacaacagctgattatattggaaaatcaaat
agtggtgtgaaattaccatcatatgcaacgcctttacaagatgttgtggcacataatgct
ttactctgtattgaccatcactattctgatcctattgtagttactagtggtcacgaatat
attcacatttgggattgttctggacattcttcatctagtttaattcctggaggtacatcg
agattgatctgtaaacaagaatatgaactttcaacatctactgaaactatttacagtgtt
aaatttaataaggttgaaaagaatttgattgcttattgtgccagagatagaactgttggt
ttatatgatatgagaactaatcaaatgattcgtgctgtgacaatgcaaactaaatcaaat
aaggtttgttggaatccaatgaatccattccatttctctgctgccaatgaagatggtaat
gtatatacttttgatatgagaattttagaaaagggaccattgatgatgcattctggtcac
attaatgcagttttggatgttgactataatccttcaggtacagaaattgtaactgctggt
tatgataagtccgttcgtattttcaaaacagatagtacaagttataaggctcgtgaagtt
tatcacacaaagagaatgcaacgtgtattcactgttaaatattctggtgatggtagatat
atttatagtggaagtgacgatcaatctattcgtatttggaagaatgaaagaagtgctcca
ctcagaggaggtggtttatcaaagaaggaacaagcacaaattgaatacaaccaaaagctt
attgaacgttacaagaatgttgaagatgtcagaaagattgccgcacacagacatttacct
cacagaatcaagactcaatcaaaggaaatgcaaaaggaacgtgaagcagaagaaagaaga
gaaaaggtcagagaaagattcacaaagaagaaggatgataagaagaactcaatgtctgcc
aagattgaaaaggtcaagacaatgagaaagagattcttaaaggttaacgagtaa

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