Naegleria gruberi: NAEGRDRAFT_77700
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Entry
NAEGRDRAFT_77700 CDS
T01241
Name
(RefSeq) transcription initiation factor IIF, beta subunit
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
ngr
Naegleria gruberi
Pathway
ngr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NAEGRDRAFT_77700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngr03021
]
NAEGRDRAFT_77700
Transcription machinery [BR:
ngr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
NAEGRDRAFT_77700
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Tau95
WHD_UBR1
Motif
Other DBs
NCBI-GeneID:
8863618
NCBI-ProteinID:
XP_002683072
JGI:
Naegr1_77700
UniProt:
D2UXQ5
LinkDB
All DBs
AA seq
300 aa
AA seq
DB search
MSEQLKRKEPSKPTTPAKRYKKQYIPLEGIVDASQADKQQIWLVKIPDFIDLDKYKDEET
IGSVIIEKNTTSNSEAKCSLHIEPPAGGEALTVSDFDLIMNKKKTPMYVFGMTKLTEEET
QERERLRQRKKSEPLLELKYIDDTKINIAGHIDQSCNAVVKFGQAYGQLSKNRVLQSNQK
EKKAVQVAESQSTKKSVNLLDAYRDGKKDDTPRDNRVREDGEKIKAKIFSLYKERQYWKM
EELANITDQPTQHVKTILSSICVYNKSGEYKGYYQLKPEYAIDESKKIGTHDLGEEEEWE
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaacttaagagaaaggaaccaagcaaaccaacaacaccagccaagagatac
aaaaaacaatatattcctttagagggtattgttgacgcatcacaagccgacaaacaacaa
atttggttggtaaaaataccagactttatcgatcttgataaatacaaggatgaggaaact
attggttccgttataatagaaaaaaatacaacaagtaattcggaagccaaatgttcactt
cacattgaacctcctgcaggaggagaagcacttacagtgagtgactttgatttaataatg
aacaagaagaaaactcctatgtatgtgtttggtatgactaaactaacagaggaagaaaca
caagagagagaaagactaagacaaaggaaaaaaagtgaacctcttttggaattgaagtat
attgatgacactaaaattaatattgctggacatattgatcaatcatgtaatgccgttgtg
aaatttggacaagcctatggacaattatctaaaaatcgtgtattacaatccaaccagaaa
gaaaaaaaggcagtgcaagttgctgaatctcaatccaccaaaaagagcgttaaccttttg
gatgcatatagagatggaaagaaggatgatacacctagagacaatcgtgtcagggaagat
ggtgaaaaaatcaaagcaaaaattttctctctctacaaggaaagacaatattggaaaatg
gaagaacttgcaaatattacagaccaacctacacaacatgtcaaaaccattttgagctct
atttgtgtctacaacaagtcaggtgaatacaaaggttactatcaattaaaaccagaatat
gcaattgatgaatcaaaaaaaattggtactcacgatttgggagaagaagaagaatgggaa
tag
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integrated database retrieval system
