Naegleria gruberi: NAEGRDRAFT_77709
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Entry
NAEGRDRAFT_77709 CDS
T01241
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_77709
03009 Ribosome biogenesis [BR:
ngr03009
]
NAEGRDRAFT_77709
Enzymes [BR:
ngr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NAEGRDRAFT_77709
Spliceosome [BR:
ngr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
NAEGRDRAFT_77709
Ribosome biogenesis [BR:
ngr03009
]
Eukaryotic type
Pre-60S particles
Helicases
NAEGRDRAFT_77709
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
8863903
NCBI-ProteinID:
XP_002683087
JGI:
Naegr1_77709
UniProt:
D2UXS9
LinkDB
All DBs
AA seq
887 aa
AA seq
DB search
MSHKRKRLQLNDDDLIEGRALYSSSDEDSDNEDFNDIPQQYDSDNEREYKKNVHRLAADE
DEESTNEQAIPSSTKKFSFDVRGSDLGKRLTRKINQNPKINKAIKSKSIFNDEEEQEVSD
EEEEEQGENNILLRAMRNDSDEEENGQVSAFDVPPSAYGNLDEEDEELDEEDGELERGNE
DDDVDEMNDDEEIPDDDDVDEMNGDEEDGEISENNDEEEELGRHDIIKTLGKASNSIDKK
ENNIIDEKDEDNYDTSFFSEAPADIEVSKSFNDMNLSRPLLKAIYEKGYEHPTPIQSRCI
PLLLKGRDICASAMTGSGKTAAFILPTLERLLYRDRSRKETLVVALLPTRELAAQCYEDC
SHFLQYTDIRCCLITGGNLKIQKQIQVLQSKPEIIIATPGRVVDHLLNSPNFRLDEVEVL
ILDEADRLLELGFEPQIKTILDHIPTARQTMLFSATMTDDIEQLVKLSLKNPIRVSCDSR
TGVASGLTQEFIKLADDENIIMKQAILLSLCTRSFPSEVIIFCNTKSMVRKLKMLLFLKG
LKVSELSSSLTQAVRLKELYKFASHETDFLVCTDVASRGLDIKGVKTVINFDMPLNLKTY
IHRVGRTARAGASGVAVSMSSESSIAILRKIVRHSKKKGQSVQQRVIPTESIEFWTDKIE
EMKPQLKELEQQLRMEEEMQQAEMLAAKNENIEEFREDIMSRPRKEWIMSKAQREELNEK
AKAQMVEQDEPTKKKRKLDPEEYENEEEMLAKQPAVEYMDYLEKKPVDKKKKKKESFKRE
MKEMGIKNWDSYVRKSGKQAKLIHKLKRNHIESDLIHKDKKEKIMQQKEKRKAKLAFKEK
KKAKVERIKQQRGAQDKKSEKRAADAFKKTKKQSHSGFKSSKKYKRR
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacaagagaaagcgattacagctaaatgatgatgaccttatagaaggaagagca
ctctatagtagtagtgatgaggattccgataatgaagattttaatgacattcctcaacag
tatgacagcgataatgagagggaatataaaaagaatgtacacagacttgctgctgatgaa
gacgaagaatcaacaaacgagcaagcaattccaagtagtaccaagaaattctcttttgat
gttagaggttccgatcttggaaaacgtcttacaagaaagattaaccaaaatccaaaaatt
aacaaggctattaaatctaaatcaatttttaatgatgaagaggaacaagaagttagtgat
gaagaagaggaagagcaaggagaaaataacatccttttaagagcaatgagaaatgattcc
gatgaagaagaaaatggacaagtttcagcattcgacgtacctccttctgcgtatggcaac
ttggatgaagaggatgaagaacttgatgaagaggatggagagcttgaaagaggtaacgaa
gatgatgacgtagatgaaatgaatgatgatgaagaaataccagatgatgatgacgtagat
gaaatgaatggtgatgaagaagatggagaaatttcagaaaataatgatgaagaagaagag
cttggtagacatgatattattaaaacacttggcaaagctagtaactcaatagacaaaaag
gaaaacaatattatagatgaaaaagatgaggacaattacgacacatcattcttctctgag
gcacctgctgatattgaagtttccaaatcatttaatgatatgaatttgtcacgcccactc
ttaaaagccatctatgaaaagggatatgaacatccaacaccaatccagtccagatgtatt
cctcttttgttaaaaggtagagatatttgtgctagtgcaatgacaggttctggtaaaaca
gcagctttcatcttgccaacattggaaagattattgtacagagatagatcaagaaaggaa
actcttgtagttgcattgcttcctacaagagaattggcagctcagtgttacgaagattgc
agccattttttacaatatacagatattagatgttgcttaattacgggaggaaaccttaaa
atccaaaaacaaattcaagttttgcaatcaaagccagaaattattattgcaacaccggga
agagttgtggatcacttactcaactctccaaacttccgtcttgatgaagttgaagtacta
atcttggatgaagctgacagattactggaattaggttttgaacctcaaatcaaaacaatc
ttggatcacattccaacagcaagacaaacaatgttattctcagcaacaatgacagatgac
attgaacaattagtgaaactctcattaaagaatccaatcagagtttcttgcgattcaaga
acaggtgttgcaagtggattgactcaagagtttatcaaacttgctgatgatgaaaatatt
atcatgaagcaagctatattactttccttgtgtacaagatctttcccaagtgaagtaata
atattttgtaacacaaaatctatggtaagaaaactgaaaatgttattatttttgaaagga
ctaaaagtgtctgaacttagctcatctcttacacaagctgttagattgaaggaattatat
aaatttgccagccatgaaacagactttttagtgtgtacagatgttgcctctagaggtttg
gatattaaaggcgtaaagacagttatcaattttgatatgcctctaaatttgaaaacctat
attcacagagtaggtcgtacagctcgtgctggtgcatcaggtgttgctgtttcaatgagt
agtgaaagtagcattgctatcttgagaaaaattgttcgccactcaaagaaaaagggacaa
tcagtacaacaaagagtaataccgacagaatctatagaattttggacagataaaattgaa
gaaatgaaaccacaactcaaagaattagaacagcaattaagaatggaagaagaaatgcaa
caggctgaaatgttagctgccaagaatgaaaatatcgaagagtttagagaggatattatg
agtagacctagaaaggaatggatcatgtctaaggctcagagagaagaattgaatgaaaag
gcaaaagcccaaatggttgaacaagatgaaccaacaaagaagaaacgtaaattagatcct
gaggaatatgaaaacgaagaagaaatgttagctaaacaacctgctgttgaatatatggat
tatctggaaaagaaacctgttgataaaaagaagaaaaagaaggaatcttttaagagggaa
atgaaggaaatgggcatcaagaactgggattcatatgtaagaaaatctggaaagcaagca
aaactcatccacaaacttaagcgtaatcatattgagtctgatttgatccataaggataaa
aaggaaaaaatcatgcaacaaaaagaaaagagaaaggcaaaacttgcctttaaggaaaag
aaaaaagcaaaggttgaacgaatcaagcaacaaagaggagcccaagacaaaaaatcagag
aaaagagctgctgatgctttcaaaaagactaagaaacaatctcactcaggtttcaagagc
tctaagaaatataagagaagataa
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