Naegleria gruberi: NAEGRDRAFT_77737
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Entry
NAEGRDRAFT_77737 CDS
T01241
Name
(RefSeq) dead box RNA helicase
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngr03009
]
NAEGRDRAFT_77737
Enzymes [BR:
ngr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NAEGRDRAFT_77737
Ribosome biogenesis [BR:
ngr03009
]
Eukaryotic type
90S particles
Helicases
NAEGRDRAFT_77737
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
AAA_22
Motif
Other DBs
NCBI-GeneID:
8863945
NCBI-ProteinID:
XP_002683456
JGI:
Naegr1_77737
UniProt:
D2UY02
LinkDB
All DBs
AA seq
907 aa
AA seq
DB search
MPRSTRLTPVEKLKKENEEVEILKQKVIELTPPKGINPLAKTSTKSSVALPSQFSKFLEL
PISQYSKDALKKAGFVTMKDIQKASILHALGGRDILGAARTGSGKTLAFVLPVLELLYRK
RWGKLDGLGALILSPNRELAQQIFEVLKLCGRYHHFSAGLLVGGTKNLKEEKEHICNMNI
LVATPGRLLQHMDETAGFICSNLQVLVLDEADRLLELGFRNELNSILDGLPKSRQTLLFS
ATQTRDIKDLARLSLSKTNTEYISVHESEPVPKQLTQHYIECQLEDKIDILFSFLKSHQN
KKVIVFSSTVKQVSFLHTVFKHLPLSVKMFKLAGRMSQGSRREMFEGFTSAKAAVLFATD
IAARGLDFPRVDFVLQLDAPVSKAFYIHRMGRTARNDADGKSVVVVTPQEKPLLTFLFDK
DSLETGSLKEMKINPEKIVTIRAQLAALLSHDTNLKQAAVKYFQTYLKHVYKHYGYDIDF
KALNLDAFAVKLGLAIKPVLILNPSDRVKKEVRLNMTEDDAEDDQSSDDDSDEMDSSDSS
DSESDVTTENGKIQKGDEEEQPEVDYDSAEGEENPRNEESDEEEDVKIQNMIDSIPVDDA
DDDIQYQVEYDPNAVSSDSDDSDDDSDDSDSEKDLENEPEEGEEKKKKKLSKIDKFMQKK
AELDKIVIGEEVTADDDFFYMKRENHKLDEKDNVPLYVNKKKFMQKIDGKKHIIFNKEGG
KISKLESVLSELKNTNLSNLTNDRSEFLNEIKTRMKKTASTDKEQDKERLKNQKEITKKR
EKELEELRRKADLLEEDPFDYQRVVKANTPNTSTSALPDEEDVDESYEDFVNAMEQPEQK
VSTTQRFKEKAEHDKQVKEKADEKKRKFDQLMATQSNLPTIVPKKKKQTVGLDEAEEMAL
KLLENKL
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgccaagatctacgcggttaactcctgttgaaaagttaaagaaggagaacgaggaagtg
gaaatacttaaacaaaaagttattgaattaacaccaccaaaaggaattaaccctcttgct
aaaacatcaaccaaatcttctgtagcattgccatcacaatttagtaaatttttagaatta
ccaatctctcaatattctaaagatgcacttaaaaaagctggctttgtcactatgaaggac
attcaaaaggcatcaatactacatgcactaggaggaagggatattctaggtgctgccaga
acaggctccggtaaaactttagcatttgtattgccagtattagaattattatatagaaaa
agatggggaaaacttgatggacttggtgcattgattttatcaccaaatagagaattagca
cagcaaatattcgaagttttaaaactttgtggaagataccaccatttttcagcaggttta
cttgttggtggtactaagaatttaaaagaggaaaaagaacatatttgtaatatgaatatt
cttgttgcaacacctggtagattacttcaacatatggatgaaacagcaggatttatttgt
tcaaacctacaagttcttgttttggatgaagctgatagattacttgaattaggtttcaga
aatgaattgaactcaattttggatggcttaccaaaaagcagacaaacacttttgtttagt
gctactcaaactagagatatcaaagatcttgcacgactttcattaagtaagacaaataca
gaatatatatctgtccacgaatcagaaccagttccaaaacaattaactcaacactatatt
gaatgtcaattggaagataagattgatattttattctctttcctcaagtctcaccaaaat
aagaaggttattgttttttcgtccactgtgaaacaagtctcatttttacatactgtgttt
aaacacttaccactatcagttaaaatgttcaaattggcaggaagaatgtcgcaaggctct
agaagagaaatgttcgaagggtttacatcagctaaagcagcagttctctttgcaacagat
atagcagctcgtggattggattttcctcgcgtagatttcgttttacaactcgatgcacca
gtttccaaagctttttacattcatagaatgggaagaactgctagaaatgatgctgatgga
aaatcagtcgttgttgtaactccacaagaaaagcctctcttaacatttttatttgataag
gatagtttggaaacaggaagtttaaaggaaatgaaaattaatccagaaaagattgtcact
atcagagctcaactcgctgcccttctatcacacgatacaaatttaaagcaagctgctgtt
aaatatttccaaacatatcttaaacatgtttacaaacattatggttatgatattgatttt
aaggcactcaatttggatgcatttgctgtcaagctggggcttgctattaaacctgtattg
atcctgaacccaagcgatagagtaaagaaggaagtacgccttaatatgacagaggatgat
gcagaggacgatcaaagcagtgatgatgattcggatgaaatggactccagtgattcaagc
gattcagaatcagacgtaaccacagagaatggtaaaattcaaaaaggagatgaagaggag
caaccagaggttgactatgatagcgcagaaggagaagaaaatccaagaaatgaagaaagc
gacgaagaggaagatgtcaaaattcaaaatatgattgacagtattcctgttgatgatgca
gatgacgatattcaatatcaggtggagtacgatcctaacgctgtatctagcgattcagac
gattcagacgatgactcagacgattcagattctgaaaaagatttggaaaatgaaccagaa
gagggagaagaaaagaaaaagaagaaattatctaaaattgacaaattcatgcaaaagaag
gcagaattagacaagattgtaataggagaggaggttacagcagatgatgatttcttttat
atgaaaagagaaaatcacaaattggatgaaaaggataatgtcccactctatgtaaataag
aagaaattcatgcaaaagattgatggaaaaaagcacattatttttaacaaggaaggtggg
aaaatatccaagttggagtctgttttgagcgaattaaagaataccaacttatccaatttg
actaatgatcgttctgagtttctaaatgaaattaaaactagaatgaaaaagactgcttcc
acagataaagaacaggataaggagagattaaaaaatcagaaggaaattacaaagaagaga
gagaaagaattggaagagcttagaagaaaggctgatcttttggaggaagatccatttgac
taccaaagggttgttaaagccaacactcccaacaccagtacaagtgccttgcctgatgaa
gaggatgttgatgaatcttatgaagactttgtgaatgctatggaacaaccagagcaaaaa
gtttctacaacacaaaggttcaaagaaaaggcagaacatgacaagcaagtcaaagaaaaa
gcagacgaaaagaagagaaagttcgaccagttaatggctactcaatccaatctgccaact
attgttccaaaaaagaagaagcaaactgttggtcttgatgaagctgaagaaatggcattg
aaattgctcgaaaataaattgtaa
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