Naegleria gruberi: NAEGRDRAFT_77772
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Entry
NAEGRDRAFT_77772 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ngr
Naegleria gruberi
Pathway
ngr03013
Nucleocytoplasmic transport
ngr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
NAEGRDRAFT_77772
03015 mRNA surveillance pathway
NAEGRDRAFT_77772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_77772
Enzymes [BR:
ngr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NAEGRDRAFT_77772
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
NAEGRDRAFT_77772
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Helicase_C_2
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
8849811
NCBI-ProteinID:
XP_002683176
JGI:
Naegr1_77772
UniProt:
D2UY94
LinkDB
All DBs
AA seq
455 aa
AA seq
DB search
MSEEEIAKEIKQMTLNAGDSWADTVEAPVTTTSLLDEELDKQQHDPTNPLYSQQIKFENM
KLKPELLKGIYSMHFKEPSSIQAKSLPIILEEDVNLIAQSQSGTGKTACFGLAMLQAVDE
SVNSTQAICICPALELATQIYSVVKGLGQHTGIKIYAALKGQEIPRNLTDHIVIGTPGTV
NEMIRRRSINTKTVKILAVDEADQMLEEGNSQLRDQTILIKKGLPEKCRVLLFSATFKEE
DDDKEGAEKEKKVLDFAEKVVPQPLKTILIPKEKLTLKHMKQFVVKCVDETQKIQVIKDI
YETLKVGQSIIFVNSKNYAEKLANVLQENKFTVSVTHGGLDPEVRKKVMSEFVAGTAKVL
ITTNVLARGVDIATVTHVINFDLPVVYDEKTPGSDREPDYATYLHRVGRTARFGKKGYAI
NICRDREYRIIEAFRKNLQAEIKDVPPEDLDEHIK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaagaaattgctaaagaaatcaaacaaatgaccctaaacgctggcgacagc
tgggctgatactgtagaagctcctgtaacaacaacttcacttttggatgaagaattggat
aaacaacaacatgatccaacaaatcctctctacagtcaacaaattaaattcgagaatatg
aaattaaagcctgaacttttgaaaggaatttactctatgcactttaaagaaccatctagt
attcaagcaaaatcacttcctattattttggaagaagatgttaacttgattgcccaatca
caaagtggtactggtaagactgcttgctttggtcttgccatgcttcaggctgttgacgaa
agtgttaactcaacccaagcaatttgtatttgtcctgctcttgaattggccacccaaatt
tattctgttgtcaaaggattgggtcaacatacaggaattaaaatctatgccgctctcaaa
ggacaagaaattccaagaaatttgactgatcatattgtgattggtacacctggtacagtt
aatgaaatgattagacgtagatctattaataccaagactgtcaaaattttggctgttgat
gaagcagaccaaatgttggaagaaggaaatagtcaattacgtgatcaaactattttaatc
aagaagggtttgcctgaaaaatgtagagtattactcttctctgctacatttaaggaagaa
gatgatgacaaggaaggtgctgaaaaagaaaagaaagtattggattttgctgaaaaggtt
gtaccacaacctctgaagacaatcttgatacctaaggaaaagcttacattgaagcacatg
aaacaatttgttgttaaatgtgtagatgaaactcaaaagattcaagttattaaggatatc
tacgaaacactcaaagttggacaaagtattatttttgtcaacagtaagaattatgctgaa
aagttggccaatgttctccaagaaaacaaatttactgtcagtgtcactcatggtggttta
gatccagaagtcagaaagaaggtcatgtcagaatttgttgctggtacagccaaggttttg
attacaacaaacgttcttgctcgtggtgtagatattgccacagttacacacgtaattaac
tttgatcttccagttgtctatgatgaaaaaacacctggatcagaccgtgaaccagattat
gccacttatttgcatcgtgttggtagaactgctaggtttggtaagaagggttatgccatt
aatatttgtagagatagagaataccgtatcattgaagctttcagaaagaatttacaagct
gaaatcaaagatgtaccaccagaagatctagatgaacatattaaataa
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