KEGG   Naegleria gruberi: NAEGRDRAFT_77856
Entry
NAEGRDRAFT_77856  CDS       T01241                                 
Name
(RefSeq) DNA-directed RNA polymerase III RPC4, polypeptide D
  KO
K03026  DNA-directed RNA polymerase III subunit RPC4
Organism
ngr  Naegleria gruberi
Pathway
ngr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NAEGRDRAFT_77856
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ngr03021]
    NAEGRDRAFT_77856
Transcription machinery [BR:ngr03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     NAEGRDRAFT_77856
SSDB
Motif
Pfam: RNA_pol_Rpc4 L_PA-C-like Pet20
Other DBs
NCBI-GeneID: 8849506
NCBI-ProteinID: XP_002683346
JGI: Naegr1_77856
LinkDB
AA seq 396 aa
MSDDPNQPPKKAVVYDASRLLSHKPPSSTSSSSSTTPNTSSTSSTTTISGNIGSSSTTTT
TTGGGRLPSILAPRNIEKPTQHFKSSSGMTFTPNLKPKQIKTEDSTKTDGIDLDVFMGQA
SNQTGKRKPPYNNTKPNTKAIMNKNTFNLVTGIVPMPSSSFMELGGLDSTQSSSSSGANL
KASGFGGDEDDDDDDEMMKDLLKERKNLFSGVKQAPIVLPFNEEAYLRAEAQRQATTDRQ
ATEDSIDEVQQNLFKNNIDSLMSEDKLFFIQLPSKIPYMDAAERKRQQAQEKKVVSTSVD
DAENIWTQPFENTLDKVPNGLIGEMVVYKSGKVKLKLGDVLLDVFPGSEFSFPEHVACVD
ATDKEKGQCHILGNIAKRFSCVPDVDYLLRKEGSNN
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgtctgacgatccaaatcaaccaccaaagaaggctgttgtgtatgacgcctctcgtcta
ctctcacataaaccaccatcctccacatcctcctcatcatcaacaacaccaaatacatca
tcaacatcatcaacaacaacaatatcgggaaatattggatcatcttctacaacaacaaca
acaacaggaggtggaaggcttccatcaattttggcccctaggaatattgaaaaaccaaca
caacattttaaatcgagtagtggtatgacatttacaccaaatttgaaaccaaagcaaatt
aaaacagaagattcaaccaaaacagatggtattgatttggatgtttttatgggacaagca
tctaatcaaacaggtaaacgaaaaccaccttataataatacaaagcctaatactaaagcc
atcatgaataagaatacatttaatttagtaactggtattgtaccaatgccatcatcatct
tttatggaattaggaggattagattctacacaatcatcatcatccagtggtgctaatttg
aaagctagtggttttggtggtgatgaagatgatgacgacgatgatgaaatgatgaaagat
ttattgaaggaaagaaagaatttattttcaggtgttaaacaagcaccaattgttttacct
tttaatgaagaagcatatttaagagcagaagcacaaagacaagcaacaactgatagacaa
gcaacagaagattcaattgatgaagtacaacaaaatttattcaagaataatattgattct
ctcatgtcggaagataaattattctttattcaattaccttcaaagattccatatatggat
gcagctgaaagaaagagacaacaagctcaagaaaagaaagttgtttcaacaagtgtagat
gatgcagaaaatatttggactcaacctttcgaaaatacattggataaagttccaaatggt
ctcattggagaaatggttgtttataagagtggtaaagttaaattgaaattaggagatgtt
ttattagatgtttttccaggtagtgaatttagttttcctgaacatgttgcctgtgttgat
gccactgataaagagaagggacaatgtcacattttaggtaatattgcaaagagattttca
tgtgtgcccgatgtagattatttattaagaaaggaaggatctaacaattaa

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