Naegleria gruberi: NAEGRDRAFT_77946
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Entry
NAEGRDRAFT_77946 CDS
T01241
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ngr
Naegleria gruberi
Pathway
ngr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
NAEGRDRAFT_77946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngr03021
]
NAEGRDRAFT_77946
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_77946
Transcription machinery [BR:
ngr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
NAEGRDRAFT_77946
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
NAEGRDRAFT_77946
PBAF complex
NAEGRDRAFT_77946
GBAF(ncBAF) complex
NAEGRDRAFT_77946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
Glyco_hydro_84_hel
Motif
Other DBs
NCBI-GeneID:
8858879
NCBI-ProteinID:
XP_002682938
JGI:
Naegr1_77946
UniProt:
D2UZN9
LinkDB
All DBs
AA seq
465 aa
AA seq
DB search
MQPFGFPGGNPMVGQMVGMSNDKRFLNPGVAAGMINPNSAAAAALLQQQQQQQKKPKIDY
IQLPEKVKENISESQIYSILLNYEHRLDTLLSEKKQHMRQLLLNNETTRETLRIYVSHQR
KPISKTEEEWRVGIQGGIVRTSTNLAAAEQYKFTNFLKSMSIELDRNIFTGGEDFIEWNA
IASQPLKDGFTFSRKVNLQNLQNLPGTYQLRVVFHIKQDPPLYNVTPTLNQVISNTSEYY
RCLDRTSQSNEPPTFTLNQILNMIWEYITKNQLYDMNDQSAIKLDPLLRQLLEDNTLTCS
TYAEILKKIKPHLLIPLSSSVVEIIHPIQFHVTDLTNTSTTSGSSKRDVPVQVVTPQQAK
LNSTIEKILSEEPSEDVETINKNIQSVIQEIKQHSEKMKFMKKFSDDPVNTIHSLIDSQT
RDLLILHKKQSIEEARKSSFYKPCDWINTALQKYLTNNDSKYRQN
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccttttggctttcctggtggtaacccaatggtagggcaaatggttggaatgtca
aacgataaaagatttttaaatcctggtgttgcagcaggaatgataaatccaaattctgca
gcagcagccgctctcttacaacaacaacagcaacaacaaaaaaagcctaaaattgattac
attcaactccctgaaaaggtgaaggaaaatatcagtgagagtcaaatctatagtattctt
ttaaattatgaacatcgattggataccttgttatcagagaagaaacaacacatgagacaa
ttattgttaaacaatgaaacaacaagggaaacactcagaatttacgtctcacatcaaaga
aaaccaatttcaaaaactgaagaagagtggagagttggaattcaaggaggtattgtcaga
acgtcaacaaatcttgcagctgctgaacaatacaaatttacaaactttttaaaatcaatg
agcattgaattagatagaaatatattcacaggtggagaagattttattgaatggaacgct
attgcatcacaacctttaaaggatggttttacattttccagaaaagttaatttacaaaac
ttacaaaacctaccaggtacatatcaactaagagtagtttttcacatcaaacaagatcct
cctctctataacgttactccaaccctaaatcaagttatttccaatactagcgaatactac
cgatgtttggatagaacatcacaatccaatgaacctccaacctttactttgaatcaaatc
ctaaatatgatatgggaatatatcactaagaatcaactctatgacatgaatgatcaatca
gcaatcaaattggatcctcttctcagacaacttttagaagataacactttaacttgttca
acatatgcagagattttgaaaaagattaaaccacacttgttgataccactttcgagtagt
gtggtagagataattcatccaatccaattccacgttactgatctaacaaatacttctaca
acttctggctcctctaagagagatgttcctgtccaagtagtaactccacaacaagccaag
ctcaattcgactattgaaaagattttgagcgaagaaccaagcgaagatgtcgaaactatc
aataagaatattcaatccgtcattcaggaaattaaacaacactcggaaaagatgaagttt
atgaagaaattttcggatgatcctgtaaatactatacactctttaatagattctcaaact
cgagatttattgattttacataagaaacaatcgattgaagaggccagaaagtcatccttt
tacaaaccatgtgattggattaatactgctttacaaaaatatttgacaaataatgattca
aaatatagacaaaattga
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