Naegleria gruberi: NAEGRDRAFT_77954
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Entry
NAEGRDRAFT_77954 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
ngr
Naegleria gruberi
Pathway
ngr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NAEGRDRAFT_77954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngr03009
]
NAEGRDRAFT_77954
Ribosome biogenesis [BR:
ngr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
NAEGRDRAFT_77954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
Beta-prop_WDR5
Beta-prop_ACSF4
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
8859558
NCBI-ProteinID:
XP_002682725
JGI:
Naegr1_77954
UniProt:
D2UZR4
LinkDB
All DBs
AA seq
725 aa
AA seq
DB search
MTSSSVDVSSLGSTCWEPSLNGTIRNFATISQNNNQINIYSGENSQLLLQLNLPLDLQSK
FTSMSWISLNSSVASDDEKKKKTHKTYILAGTQDGKIIAFDTERGRLVKSIQLSPTTSSS
VSPILNVNCPDGNRIFAALAPNLIAGTHFLSKSNNTKVDLHKICFEDITCLSENCGHLNG
ADVFAIANSGKTQLFQVNTQQRVCDFQGHENGANQILFIHSDLLLTRSKDDRIVNLYNLS
NIMSSSSSNGLNTSNFIEQLMTTSSNHSELIAPNKVFTLDANVVAIDGFYRSKKYLDIAA
VSHAGLLTLFRVKPSEKSTYDIISKATVKCHLSKGFGKVISAKFIDESRIILAMGSPLFP
NIQVLDYSSTDKDQENFLFLEKDLVIDEQPIVAGTKDNKLIGSKGSTYSSNMVLGVANME
SANARFAQTLSTTEGSQKSFQDILSQQTSTSTKKDMTLSEAGVPVMKLNSSLITALKSHD
VGMISKCLAHSDFDLIESTVQNLSATFAIKLLDVIIELYGDFSQSRDTLIFWLRSLLVNH
TSHIMSQKDIIERLSPIYHSIDSRLRMLPSLMDLSGRLDLLLSIGGYAKVDFDTTDNISA
AAKAKAKKFTIVEKDEDSEDEIIEMIQASYNKKSSGDDDFDVIDDDNDDRDEEILKGMED
ENKKGWFADMNSDDEMSEEERELNELLKREEQVMKSRGSSNDDEDDDDEDDDEMQDDMQD
DEDDE
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgacttcctcctctgtagatgtttcatcgctcggctccacttgttgggaaccaagcttg
aacggaacaattagaaactttgccacgatatcccaaaataataaccaaatcaacatttat
tcaggagaaaattcacaacttttgcttcaattaaatcttcctttggacttgcaaagtaaa
tttacttcaatgagttggatttctctcaactctagcgttgctagtgatgatgaaaagaag
aagaaaacacacaaaacatacatccttgctggtacacaagatggaaaaattatagctttt
gataccgaaagaggaagactcgtaaaaagtatacaattatcaccaacaacatcatcatca
gtatctccaattttaaatgttaattgtcctgatggaaatagaatttttgcagctcttgca
cctaatctcattgcaggaactcatttcctttcaaagtccaataataccaaggttgattta
cacaaaatttgtttcgaagatattacttgtttgagtgaaaattgtggtcacttgaatggt
gctgatgttttcgctattgcaaattctggaaagactcaactattccaagttaacacacaa
caacgtgtttgtgatttccaaggtcatgaaaatggtgctaaccaaattttatttattcat
tctgatttacttttgacaagatcaaaggatgatagaattgttaacttgtataatttaagc
aatataatgtcaagctctagttctaatggtttaaatacttcaaactttattgaacaattg
atgactacatcatcaaatcactcggaattaattgctcctaataaggttttcactttggat
gctaatgtagtagctattgatggcttctatcgttctaaaaagtatttggatattgctgct
gtttctcatgctggattgttaactttattcagagttaaaccatctgaaaaatcaacttat
gatattatttctaaagctactgtcaagtgccatctttctaaaggatttggtaaggtcatt
tctgccaaattcatcgatgaatcacgtataattttggctatgggatcaccactcttccct
aatattcaagttttggactattcttccactgataaggatcaagaaaactttttattctta
gaaaaggatctcgtcatagatgagcaacctattgttgctggaacaaaggacaacaaattg
attggtagcaaaggaagtacctactctagtaatatggttttgggtgttgctaacatggaa
tctgccaatgctagatttgcccaaaccttatcaacaactgaaggttctcaaaagtctttc
caagatattctctcccaacaaacatctacatccaccaagaaggatatgactctctctgaa
gctggtgttccagttatgaaactcaactcatctttaataacagcattgaagagtcatgat
gttggaatgatttcaaaatgcttggctcactctgactttgatttaattgaatctacagta
caaaacctttcggcaacatttgcaatcaagttattggatgtcattatcgaattatatgga
gatttctcacaatcaagagatactttaatcttttggcttagatccttgttggttaaccat
acatcacacataatgtcacaaaaagatatcattgaaagattgtctccaatttaccactca
atagattcaagactgcgaatgctcccatctttaatggacttgtcaggaagattggattta
ttactttctattggtggatatgccaaggttgattttgatacaactgataatatttcagct
gctgctaaggctaaggctaagaagttcacaattgtggagaaggacgaagatagtgaagat
gaaattattgaaatgattcaagcatcatataataagaaatcttctggggatgatgacttt
gatgtaattgacgatgataatgatgacagagatgaagaaattttgaaaggaatggaggac
gaaaataagaagggttggtttgctgatatgaatagtgatgatgaaatgagcgaggaagaa
agagaattaaatgaacttttaaagagagaagaacaagtaatgaaatctagaggttcttct
aatgatgacgaggatgacgatgatgaagatgacgatgaaatgcaagatgacatgcaagat
gatgaagacgatgaataa
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