Naegleria gruberi: NAEGRDRAFT_78072
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Entry
NAEGRDRAFT_78072 CDS
T01241
Name
(RefSeq) condensin subunit SMC1
KO
K06677
condensin complex subunit 1
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_78072
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
NAEGRDRAFT_78072
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cnd1
Cnd1_N
Nipped-B_C
Cohesin_HEAT
DUF365
Motif
Other DBs
NCBI-GeneID:
8855456
NCBI-ProteinID:
XP_002682316
JGI:
Naegr1_78072
UniProt:
D2V0U2
LinkDB
All DBs
AA seq
1228 aa
AA seq
DB search
MANEDYVLNFSIPLKPEDLEIESETFFYVSDDMDVNSFSTTEIHSLIDDIENKISDKPYS
ITDGSVFTAIYSCIKHFSALDDTCKQRLLDSLVTNLSSLLTSITNLFIRSSAERSYGADD
FDKVVAIHKNALKMFVFCVFWGIYKFEKEEMESNSEAEKKKKKSKSKKRRKSVLEMDDWK
ERILKLLISVLGHKLDKLWNKEDKIEDSFVLLFFRVAFSFMENPENLKSETLKPKIIELI
IAALHAPSGNMQTVISSILSMIMSNASCLSCIIEMIEHICAPSSDSENSVGKLFVSELFR
EISRLEQSVMKSDSAGTKNLAQFISDLGERVPLSILVNMSVVISHLDAECYHIRNAVLQA
ITHVICKILKSTSEENNSRNTTTENITKKTRDSLIDILEERMYDVNAYTRSKVLACWGML
CEEKALPVRKIPQVLEMVSGRLYDKSAFVRKAAVHFLSTILSNNPYGSVLKLSILEEKLA
AAKKTYDDIPQYSEPELELLPEAEKTDLKTKQDRAKRYCILFREAISFVNNLHSTFESAY
QLLNSKTSSDVCECISFIEKSFMFKLDISTPALKKIFKLIWSPEQTVKDAVLESIQNIFM
NPENLKSTDECIEVAQRFAELALECNQSELSSLETIVNLIVYNNKFSKNLFLALFELTGK
KQPENHVVGALIIINMVATARPEPIRKKIKLLVTEVMEERAKASFLIAVYSCQILQRLAK
DDSSEAFQDEKKKKSSSNENDDCLKYVGGNPRYRLPDNHSVFKLLLDLIIGDPNSPPELS
KLSEWMTITESALNAIFCLAEDPIQLTTHIIKEVSLKTNLSDPNQSRSETLTVSPIELTK
LFFILGHSALKELVLIEDQFKQAKKYKHRMALEKEQAAAEKKEKPKKGSKKKRDRQELEE
ENDNDTTVLERELGLDPSSLDDHELEETFEKKERNIITESSLYGSYLPLILSICHDSANL
YRYSPLRKTAILALCKYMCISQTVCEDNIRLLFTILIRKPEMRSKQSIEGYTTIRNNIIV
TIGDLACRYPNVVERYIHHLYSCLRDSDSRIRKNTLLVLSHLVLNDMVKVKSNIFEIVRC
IEDTSEEISQLSKSFFTELAKKASGSNNPIYNLLPTILSNLSRRDAGVGPVAFQNIMKFL
ISFVTKVQHNEKLVRKLCQRFDLVRSSSTTKATDEVFEKKEEDHHTDETNMDVQPNEDLT
KMEKSCLLFDPTHNERQVYSNIDFRRLC
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaagactatgtgttaaacttttcgattcctttaaaacctgaggacttggaa
atagagtcagagacctttttctatgtttctgatgatatggatgtgaattcattctctacg
acagaaattcacagtttaattgatgatattgaaaacaaaatttcggataaaccctactct
atcacagatggaagcgtctttacagcaatctacagttgcattaaacatttttctgctctt
gatgatacttgtaaacaacgtctattggacagtttagtcacaaatctaagcagtctgtta
actagcataacgaatctgttcatcagatcatcagccgaaagatcatatggagcagatgat
tttgacaaagttgttgctattcacaagaatgctttgaaaatgttcgtcttctgtgttttc
tggggaatttataaattcgaaaaggaggaaatggaatccaatagtgaagcagaaaagaag
aagaagaaatccaaatctaaaaagagaaggaaaagcgttttggaaatggatgattggaaa
gaaagaatactgaaactcttgatttctgtcctaggacataaattagacaagttgtggaat
aaggaagacaaaatagaggactcttttgttttgttattcttcagagttgccttctccttt
atggaaaatccagaaaacctaaaatcagaaactctcaaaccaaagattattgagcttatc
attgctgcccttcatgcaccatcaggaaatatgcaaacagttatttcttcgatactatcc
atgataatgtcgaacgccagttgcttatcatgtattattgaaatgatagaacacatttgt
gctccttcatctgattctgagaatagtgttggaaagctttttgttagcgagttattcaga
gagataagcagattagaacaatctgtcatgaagtcagattctgcaggtacaaaaaacctt
gctcaattcatatcagacttgggcgaaagagttccactatcgattcttgtaaatatgagc
gtagtgatatcccatttggatgcagaatgctatcatatcagaaatgctgttctgcaagca
atcacacacgtaatttgtaaaatactcaagtcaacttcagaagaaaataacagtagaaat
accacaacagaaaacattaccaagaaaactcgtgattctctgattgatattcttgaagag
agaatgtacgacgtaaatgcatacacacgtagtaaggttcttgcttgttggggaatgttg
tgcgaggaaaaggctctgcctgtgagaaaaatacctcaagttttggaaatggtgtctgga
agattatatgataagagtgctttcgtcagaaaggctgcagtgcatttcttatcaaccatt
ctgtctaacaatccttatggaagtgttctgaaattatctatattggaagagaaattggca
gctgctaaaaaaacatatgatgatattccacagtactctgaacctgagcttgaacttctt
ccagaagcagaaaaaactgatctcaagacaaaacaagacagggcaaaaagatattgcatt
ttgttcagagaagcaatttcttttgttaacaatttgcattcaacctttgaatctgcctat
caactcttaaattctaaaaccagctctgatgtttgtgaatgtatcagctttatagagaag
tctttcatgtttaaacttgatatctccactcctgcccttaagaaaatatttaagcttatc
tggtctcctgaacagactgtcaaagatgctgtattggaatcaattcaaaatatctttatg
aaccctgaaaatttgaaatcgactgatgagtgtattgaagttgcacaacgatttgcagag
ttagctttagagtgcaaccaatctgagctttcctctctggaaactattgtgaacttgatt
gtttacaataataagttttcaaaaaatctgttcttggcattgttcgaattgaccgggaaa
aaacaaccagaaaatcatgtagttggagcccttattataattaatatggttgctacagct
agaccagaaccaataagaaaaaagattaaactgttagttaccgaggttatggaagaacga
gctaaagctagcttcctcattgcagtatattcatgccaaattctgcaaagacttgctaag
gacgactctagcgaagcttttcaagatgaaaaaaagaagaagagtagctcaaacgagaat
gatgactgtctgaaatatgttggtggtaatccaagatacagactaccagataatcacagt
gttttcaaacttttgcttgacctcatcattggagatcctaattcaccaccggagctatcc
aaactttctgaatggatgaccattactgaatctgctttgaatgctatattttgccttgca
gaagatccaatacagttgacaacccacattattaaggaggtttcattgaaaactaattta
tcagacccaaaccaatcacgatctgagacgctcactgtttctcctattgaacttacaaag
ctattttttattttaggacattctgctctaaaagaattagtgctgattgaagaccaattc
aaacaagccaagaaatataaacatagaatggccctagagaaggaacaagcagctgcagaa
aagaaggaaaaaccaaagaaaggatctaaaaagaagagggatagacaagaacttgaggag
gagaatgataatgatacaaccgttctggaaagagaattaggcttagatccatcaagtctt
gacgatcatgaacttgaagaaacatttgaaaagaaggaacgaaatatcattactgagtca
tctttatatgggtcctacttgcctttgattttatctatttgccatgatagtgccaatttg
tacagatattctccattgagaaaaacagccattcttgccctttgtaaatatatgtgtatc
agtcaaacagtatgcgaggataacatcagattactttttacaatcctcataagaaaacca
gaaatgagatctaaacaatccatagaaggttataccaccattagaaataacattattgta
acaataggcgatcttgcgtgtagataccctaatgttgttgaaagatatattcatcacttg
tatagttgtctcagagattcggatagtagaatcagaaagaacaccttgttggttctttct
cacttggttcttaacgatatggtaaaagtcaagtcaaatattttcgaaattgtcagatgt
attgaagacacttctgaagaaatttcgcaactatcaaaatctttctttacagagctagct
aagaaggcatccggtagcaacaatccaatttataacttgttaccaaccattttaagtaat
ttatcaagaagggatgctggtgtaggccctgttgcattccaaaacattatgaaattcctc
atttcatttgtaacaaaggtgcaacataatgaaaagttagttcgcaaactttgccaaaga
tttgaccttgtacgttcttcttcaacaaccaaagccacagatgaagtttttgagaagaag
gaagaggatcaccacacagatgaaaccaatatggatgtgcagccaaatgaagatctaaca
aagatggagaaatcttgcttactgtttgacccaactcacaatgaacgacaagtgtattca
aatattgatttcagaagattgtgttaa
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