Naegleria gruberi: NAEGRDRAFT_78091
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Entry
NAEGRDRAFT_78091 CDS
T01241
Name
(RefSeq) single-stranded DNA-binding replication protein A large subunit
KO
K07466
replication factor A1
Organism
ngr
Naegleria gruberi
Pathway
ngr03030
DNA replication
ngr03420
Nucleotide excision repair
ngr03430
Mismatch repair
ngr03440
Homologous recombination
ngr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NAEGRDRAFT_78091
03420 Nucleotide excision repair
NAEGRDRAFT_78091
03430 Mismatch repair
NAEGRDRAFT_78091
03440 Homologous recombination
NAEGRDRAFT_78091
03460 Fanconi anemia pathway
NAEGRDRAFT_78091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngr03000
]
NAEGRDRAFT_78091
03032 DNA replication proteins [BR:
ngr03032
]
NAEGRDRAFT_78091
03400 DNA repair and recombination proteins [BR:
ngr03400
]
NAEGRDRAFT_78091
Transcription factors [BR:
ngr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
NAEGRDRAFT_78091
DNA replication proteins [BR:
ngr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
NAEGRDRAFT_78091
DNA repair and recombination proteins [BR:
ngr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
NAEGRDRAFT_78091
MMR (mismatch excision repair)
NAEGRDRAFT_78091
DSBR (double strand breaks repair)
HR (homologous recombination)
NAEGRDRAFT_78091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
DUF223
Pox_A12
Motif
Other DBs
NCBI-GeneID:
8852323
NCBI-ProteinID:
XP_002682345
JGI:
Naegr1_78091
UniProt:
D2V0Z2
LinkDB
All DBs
AA seq
598 aa
AA seq
DB search
MSKLDRCIAPLMQGKTMDKITPCVQVTEARSSGQKLIVTISDGINSCPAVIIKPSQPVDQ
YAVIKIYESLKHTKEIVIIVKYTVEERLDAVIGNPKPYATAGASDTSSSDKVKTTSTSKS
SSSSASTSVQPKAKKSSGTTAADNFYDDGGMSSILDDDKLSNDQAKPISNLNPYDKVWVI
KARVTQKSDMKHWDKGTSKGSLFSIELLDEYGGQIRATFFNDVAKKYYDAIKERSVYFFS
GGKLKDANRKFTTIPHPYEITFDRDTVIQNARDSEIPTDTFNCTRLCDMTNVEDNMILDV
AGVVQNIGETKEFTTKNNRKTKRCNISLIDDSSSPFCTVDLTIWGDMCDTHDMQQGDVVI
LKSVRKSNYGGVSLNTINSTRIFKDPGIPIYQQLSEWYQNNEGSFDGEGIKLTQKQAAVN
SERTFKRKNVIADCKNMSVDTVTAPDYLTIRAYVSYIKHELWYDACTNKECNKKVQQNEG
IYHCSSCNHSSDTCTRKFLANLGITDWTGKQYCNAFNQAVEKLFSDMTADDMCARAAEPE
YMPYLLGEKTFTRYVFTVRVTTETTKEPKLKFTIIRVTPIDYAREAKSILSLIRDYDI
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaactcgatcgttgcatagctcccctgatgcagggaaaaacaatggacaaaatt
acaccttgtgttcaagtaactgaagctcgttcatccggtcaaaagttaattgttactatt
agtgatggaattaattcttgtcctgctgttattattaaaccttctcaacctgttgatcaa
tatgcagtcattaaaatttatgaaagcttgaaacacacaaaggaaattgttatcattgtc
aagtatactgtggaagaacgtttagatgcagtgatcggcaatccaaaaccatatgcaact
gctggcgcaagtgacacttcatcatctgacaaggtaaagacaacatcaacaagcaaaagt
agtagttctagtgcttctacttctgttcaaccaaaggctaaaaagagttctggtacaaca
gctgcagataatttctatgatgatggtggaatgagtagtattttagatgatgataaactt
tctaatgatcaagctaaaccaatttcaaatctcaatccatatgacaaagtctgggtaatt
aaggctagagtaacacaaaagagtgacatgaaacattgggacaaaggaacaagtaagggt
tctcttttctctattgaattattagacgaatatggtggccagattcgtgctactttcttc
aatgatgttgccaagaaatattatgatgctatcaaagaacgttcagtttacttcttctct
ggtggtaaattgaaggatgcaaatagaaagtttaccacaattccacacccttatgaaatt
acttttgaccgtgatactgttattcaaaacgctagagattctgaaattccaactgacact
ttcaattgtactagattatgtgacatgacaaatgttgaagataacatgattttggatgtt
gctggtgttgttcaaaatattggagaaactaaagaatttactacaaagaataatagaaag
accaaacgttgcaatatctccttaattgatgactcatcttctccattttgtactgttgat
ttaacaatctggggtgatatgtgtgatactcatgatatgcaacaaggagatgttgttatt
ttgaaaagtgtaagaaagtcaaactatggtggtgtttctcttaacactattaatagtaca
agaatcttcaaagatcctggaattccaatttatcaacaattatctgaatggtatcaaaat
aatgaaggatcgtttgatggtgaaggtatcaagttgactcaaaagcaagctgctgtaaat
tctgaaagaactttcaagagaaagaatgttattgctgactgtaaaaatatgagtgttgac
actgttactgcacctgattatcttactattagagcttatgtttcatatattaaacatgag
ttgtggtatgacgcttgtacaaataaggaatgtaacaagaaagttcaacaaaatgagggt
atttaccattgctcatcatgtaatcattcctctgatacatgtaccagaaagtttttggct
aatttgggtattactgattggactggtaaacagtattgcaatgcattcaatcaagctgta
gagaaacttttcagtgacatgactgctgatgatatgtgtgcaagagcagctgaacctgaa
tacatgccataccttttaggtgaaaaaacattcaccagatatgtatttactgttcgtgtt
accactgaaacaacaaaggaacctaaactcaaattcactattatcagagttactccaatt
gactatgccagagaagctaaaagcattttgagcttgattagagattacgatatttaa
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