Naegleria gruberi: NAEGRDRAFT_78151
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Entry
NAEGRDRAFT_78151 CDS
T01241
Name
(RefSeq) SNF2 domain-containing protein
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
ngr
Naegleria gruberi
Pathway
ngr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
NAEGRDRAFT_78151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_78151
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
NAEGRDRAFT_78151
INO80 complex (yeast)
NAEGRDRAFT_78151
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DBINO
HDA2-3
ResIII
DEAD
Val_tRNA-synt_C
Motif
Other DBs
NCBI-GeneID:
8849999
NCBI-ProteinID:
XP_002681923
JGI:
Naegr1_78151
UniProt:
D2V1K9
LinkDB
All DBs
AA seq
1231 aa
AA seq
DB search
MNGSDEGSTITMNGTIHHHQNTNGITSSSTLAATSSDNNNHDTLTSTLNDDAIIESTPIK
QESFDENLMKQNSTTRQLLTKPLSLVDYEYLLKLETDLSNQEDNHLDEGYLKDAAEDYDK
LGDYCTSYFESNSLDLEVQKQLIAENSIETLTVEESKTLESKTISKTLEETFNSICDEYL
DINVYEEILSQQYEEQNEKKRKPCDGVAIHTWKNTLIRANQPTLLVSSSMRKKKRTKRDE
QDRGNFEVAFTVPMNGFNINKVVENFQNCISSHHHFIDKATNLRSKKSWIENMNQEQTEI
KTQVEQFSKALIHEKLNETLNSQKSHDTRATNGTSKPSVNIKHSKLHQISKDVAQKVKEK
QTKSVTELDNTVGGISSVLSDRMNSFWKKHEKEISEKRKRKKKEEEEKEEAVRQQRKLNF
LLSQTELYSHFMSKKSITSAVTSDDSTEENAAQSALQASQRQKQFTEDFDKEIEKYRTQS
SMEDENIIEAGDETMQEPNIFNGSLKKYQLKGMKWLVSLYEQGINGILADEMGLGKTIQT
IAFMAYLAEKKSIWGPTLIITPSSTLHNWQQEFEKFCPTLRVLPYWGALKERKLLRKYWT
NPDKLYQKDSPFHVVVSSYGLILEDEKYFKKVKWQYLILDEAHAIKSSKSLRWKTLLSMK
CRNRMLLTGTPIQNNMKELWALLHFIMPSIFDSHDEFNDWFSKDIESHATKEQDTKLNEQ
QLARLHMILKPFMLRRVKKDVESEMAPKTEVVLSCGLSSLQGETYYRIKDDFKKSSKDKK
KKIAVDSTSKSALMNIVMQLRKACNHTHLFKEFRQDTLSPFPFTTPISFLKHIPGKIYDE
CERLTNPIQFHLPKLIFRELTPQGSLEMESNSLMISKRFDFVHDISYMIDTFGTLRYFFK
DNFWRLYKLRNLKNRIVEFRDRKGGFQFLMDELLSEQLNNHLERCNYLIQNIEIFYKSNR
DLLKKLGECCIEKVIAPPIEVKCSDRGCDYQMTPIKTRFFNKKFLYNNQFIYDTFNTSRI
SLPSVSKLIADSGKLKVLDQLLSKLKQEGHRVLIFCQMTKMMDLLEEYMYKRRYTFFRLD
GSTGISERRDMVDAFQNQRVDPVFAFLLSTKAGGLGITLTAADTVIFYDSDWNPTLDAQA
MDRVHRIGQTKPVTIYRLITKNSVEERILAIAKQKSTIQETVYKGQFKMQDSNEEEAADE
LLEDEDAVEAAVVVDDAGDLDEKEIMSLILD
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaagtgatgaaggtagtacaataacaatgaatggaacaatccatcatcatcaa
aataccaatggtattacttcttcatcaacactagcagcaactagtagtgataataacaat
catgatacattaacaagcactctgaatgatgatgctattattgaatccactccaatcaaa
caagaaagctttgatgaaaacttgatgaaacaaaattcaacaacgaggcaactattgaca
aaaccattgtctctggttgattatgaatacttactcaaattggagactgacctttccaat
caagaagataaccatctagatgaaggatatttaaaggatgctgcagaagattacgacaaa
ttgggagattactgtacaagttattttgaatcgaatagtttagatttggaggtacaaaaa
cagttaatagcagagaattcaatcgaaactctgacagtagaagaatctaaaactttggaa
tccaagacaatttcaaaaacccttgaggaaacattcaatagtatttgtgatgaatatctt
gatattaatgtgtatgaagagattttatctcaacaatacgaggagcaaaatgaaaagaag
agaaagccatgtgatggtgttgccattcatacttggaagaatacattaataagagcaaat
caaccaaccttgttggtttcttcatccatgagaaaaaagaagagaacaaaaagggatgaa
caagatagaggcaactttgaagttgcattcactgttccaatgaatggtttcaatattaat
aaggtggttgaaaatttccagaattgcatcagttcacaccatcattttatagacaaggcc
accaatttgagaagtaagaagagttggattgaaaatatgaatcaagaacaaacagaaatc
aaaacacaagttgaacaattttctaaagctctcattcatgaaaagttgaacgaaacgttg
aactctcaaaagagtcacgatactagagcaacaaatggaacttcaaagccatctgtaaat
atcaaacactccaaattacatcaaatatccaaagatgtggctcaaaaggtaaaggaaaaa
caaaccaaatcagtaacagagctggataatactgtgggaggtatttcatctgtactttct
gatagaatgaactctttttggaagaaacacgaaaaggaaatatcagaaaagagaaagaga
aaaaagaaggaagaggaagagaaggaggaagctgtaagacaacaaagaaagttaaacttt
ctcctctctcaaacagaactctactctcactttatgtccaaaaaatcaatcacaagtgct
gtcacttctgatgattcaacagaagagaatgcagctcaatcagctcttcaggcatcacaa
agacaaaagcaattcactgaagattttgataaggaaattgaaaagtacagaacacaatca
tcaatggaggatgaaaatataattgaagcaggtgacgagaccatgcaagagccaaatatt
ttcaatggctcacttaaaaagtaccagttgaagggtatgaaatggttggtatctttgtac
gagcaaggtatcaatggtattttagcagatgaaatgggtttaggtaaaacaattcaaacc
attgcatttatggcctatctggctgaaaagaagagtatttggggaccaacccttatcatt
actccttcatctacacttcacaattggcaacaagaatttgaaaaattctgtccaacactt
cgagtattaccatactggggagcattgaaggagagaaaattgctcagaaagtactggacc
aatccagataagctctatcaaaaagactcaccattccatgttgttgtttccagttatggt
ttaatattggaagatgaaaagtatttcaaaaaagtcaagtggcaatatttaattctagac
gaagcccatgccattaaatcgagtaagagtttgagatggaaaacactgttgagcatgaaa
tgtagaaatagaatgcttttaacaggtactcctattcaaaataacatgaaagagttgtgg
gccttgcttcactttatcatgccttcaatattcgattctcatgacgagtttaatgattgg
ttttcgaaagatattgaatctcatgcaacaaaggaacaagacaccaaacttaacgagcaa
caattggccagattacacatgattctcaaacctttcatgttgagaagagtcaagaaggat
gttgaaagtgaaatggcaccaaaaactgaggttgtcctctcgtgtgggttgagttctctg
cagggagaaacttactaccgtattaaggacgatttcaaaaaatcctccaaagataagaag
aagaagattgctgttgattcaacaagcaagtcagcactgatgaatattgtaatgcaactg
agaaaggcatgtaaccatactcatttattcaaagagtttagacaagacacactctctcca
ttcccattcaccacgccaatatcattcttgaagcacattccaggaaaaatttatgatgag
tgtgaaagattgaccaatcctattcaattccaccttcctaaattaatttttagggagctg
acaccacaaggatctctagaaatggaatctaacagtttgatgatttcaaagagatttgac
tttgttcatgacatttcatacatgatagatacgtttggaacacttcgttactttttcaaa
gataatttttggagattgtacaaacttagaaatttaaagaatagaatagtcgagttcaga
gatagaaagggtggttttcaatttttaatggatgagttactaagtgaacaattgaacaac
cacctcgagagatgtaattatcttattcaaaatattgaaattttctacaaatccaataga
gatctcctcaagaaacttggcgagtgttgcattgaaaaagttattgcaccaccaatagaa
gtcaaatgttctgatagaggttgtgattatcaaatgacacccattaagactaggttcttt
aataagaagttcttgtacaataatcaatttatttatgatacctttaacacttccagaata
tcattaccgagtgttagcaaacttattgccgattctggaaaactcaaagttttggatcaa
ttactttcgaaattgaaacaagaaggacatagagttttaattttctgtcaaatgacaaaa
atgatggaccttttagaagagtacatgtacaagagaagatatacattctttagattggat
ggttcaacaggaatttcagaaagaagagacatggtagatgccttccaaaatcaacgagtg
gatccagtttttgcattccttctctccacaaaagctggaggtctaggtattaccttaaca
gcagcagatacagtcattttctatgacagtgattggaatccaacattggatgctcaagcc
atggatcgtgtccacagaattggtcaaactaagccagttacaatctatcgtttaattact
aaaaactctgtggaagagagaatccttgccattgccaagcaaaagagtaccattcaagag
acagtctacaagggtcaattcaaaatgcaagacagcaatgaagaagaagcagctgatgaa
cttctcgaagatgaggatgcagttgaggcagcagtcgtagtcgatgatgcaggagatttg
gatgagaaggaaatcatgtccctcattctagattaa
DBGET
integrated database retrieval system
