KEGG   Naegleria gruberi: NAEGRDRAFT_78199
Entry
NAEGRDRAFT_78199  CDS       T01241                                 
Name
(RefSeq) exoribonucelase, VacB family
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
ngr  Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ngr03016]
    NAEGRDRAFT_78199
Enzymes [BR:ngr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     NAEGRDRAFT_78199
Transfer RNA biogenesis [BR:ngr03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    NAEGRDRAFT_78199
SSDB
Motif
Pfam: RNB
Other DBs
NCBI-GeneID: 8855246
NCBI-ProteinID: XP_002681994
JGI: Naegr1_78199
UniProt: D2V202
LinkDB
AA seq 719 aa
MKQKQNAGSSTTTNGGDFPSLLSHTGLMFNKGSIWMGFRVNGKTFYVAPLMEDHHTEGVN
FQKMDISAPSSRFLLLDDISSYGVENTEEQRTILYKKLNNFLLNNEQEIKQKLVKFWDEN
VSPARLFSLDELIACLDLEHEKICSEIGKVILQFSTFYILTDMPHFEKSKHEMTFKSISR
EQLRESTLKLKFTHQIDNITKGDVNIILDQEELMILKYRLLECLMVQSESKYWHEFCKYI
IPKNKTMEGKVKFWLHHLGVEISLPEALILKSNVFPAELNDLVIKCILKVADPKELHHKM
KDIVHYTGYKEKIPEFTKDWRYYDNVITIDSEGTMDIDDAISILESNSDSLKVAVHITNV
GHFLYEYLGESDINKLFQHHLFREASRKVTSHYICLPKDSPLFRTTDNHERPLTVFPMLP
PSLSEDLLSLKTGEKVAITYEFDMKVGEPPILINIHPSRVNIIENTTYEKVETLFDSDEN
WEKLYQYCAQLQTSRLTNQQVDRPYIVPHPSSNTTSDLIISSRRSLKGSIVIGECAILVG
SLVGEYFSKNNIPAIAKVFEDGLTRIKISNGYLSSPYIQQTSPVRRFIDTINQIQLYLHL
TRQAILSENQLELFKEKIDSETHKSQDVEDDTIMYWVLCNLWENYKYDENQASQPKHLTG
IVGKPKEGNHVKIKLDKERFCSFKILCSNIDPSLLDTTIHFLIDSIDWEELTVKIKQFD
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgaaacaaaagcaaaatgctggatcttccacaacaacgaacggaggtgattttccaagc
cttctctctcacactggactaatgttcaacaagggaagtatttggatgggatttcgggtg
aatggaaaaacattctatgttgcaccattgatggaggatcaccatacggaaggtgttaat
tttcaaaagatggatatttccgcaccatcatcacgatttttattacttgatgatatttca
tcatacggagtggaaaatacagaagaacagaggactattctctacaagaaattgaacaac
tttctcttgaataatgaacaagaaattaaacaaaaacttgttaaattttgggatgagaat
gtttcacctgcaaggttattttcattggatgaattgattgcttgtttggatttggagcat
gagaagatttgttccgagattggaaaagtcattttgcaattctctacattctacattctt
acagacatgccacactttgaaaaatccaagcatgaaatgacatttaaatcaatttctaga
gaacaactaagagaaagtacattaaagctaaaattcactcaccaaattgataatataacc
aagggagatgtaaatataattttggaccaagaggagcttatgattttgaaatacagactt
ttggagtgtttgatggttcaatcagaaagcaaatattggcatgaattttgtaaatatatt
attcctaaaaacaagactatggaaggaaaggtcaaattttggttgcaccacttgggagta
gagattagtttacctgaagcattaattctcaaatcaaatgtcttcccagcagagttgaat
gaccttgtaattaagtgtattctcaaagttgctgacccaaaggagttgcatcacaaaatg
aaggatattgttcactatactggctacaaggaaaagattccagaattcacaaaggattgg
agatattacgataatgtaataacaattgattcggaaggaactatggacattgacgatgcc
attagtattttggagagtaattcagatagccttaaggtagctgtgcacataaccaatgtc
ggtcacttcctctatgaatatcttggagagagtgatattaacaaattattccagcatcat
ctctttagagaagcatctagaaaagttacctctcactacatctgcctcccaaaggattct
cctctctttagaactactgataatcacgagagaccactgacagtattcccgatgttgcca
ccttcattatctgaggatttgctctctttgaaaactggagaaaaagttgcaattacttat
gagtttgatatgaaagttggagaacctccaatccttatcaatattcatccttccagagtg
aacattattgaaaatactacctatgaaaaagttgaaactctattcgacagtgatgagaat
tgggaaaaactctatcaatactgtgcccagctccaaacaagtcgtctcacaaatcagcaa
gtggacagaccttacattgttcctcatccatctagtaatactacaagtgatttgattatt
tcatcacgtagaagtctaaaaggaagtattgttattggagaatgtgcaattttagtagga
tcacttgtaggagaatatttctcaaagaataacattcctgctattgccaaagtttttgaa
gatggcttaactagaattaaaataagcaacggctatttatcctctccttacattcaacaa
accagtccagtcagaagatttattgatacaatcaatcaaattcaattatatttacacttg
acaagacaggcaattctatctgaaaatcaattagaactattcaaggagaaaattgattca
gagactcataaatcacaagatgtggaagatgatacaatcatgtattgggtactttgtaat
ttgtgggaaaattacaaatatgatgaaaatcaagcatctcaaccaaaacatctaacagga
atagttggaaaaccaaaagaaggtaatcatgttaaaatcaaattagataaggaaagattt
tgttcattcaaaatactctgctctaacattgatcccagtcttttagatacaaccatacat
ttcttaatcgattcaatagattgggaagagttaactgttaaaataaagcagtttgattag

DBGET integrated database retrieval system