Naegleria gruberi: NAEGRDRAFT_78412
Help
Entry
NAEGRDRAFT_78412 CDS
T01241
Name
(RefSeq) nucleoporin nup93
KO
K14309
nuclear pore complex protein Nup93
Organism
ngr
Naegleria gruberi
Pathway
ngr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
NAEGRDRAFT_78412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_78412
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
NAEGRDRAFT_78412
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
DUF5470
IBN_N
MC7
Cytokin-bind
Motif
Other DBs
NCBI-GeneID:
8852498
NCBI-ProteinID:
XP_002681386
JGI:
Naegr1_78412
UniProt:
D2V3I5
LinkDB
All DBs
AA seq
843 aa
AA seq
DB search
MPSTVASIASAGGKSSTNNNNNFKMDLMDLLDRSQQLLPVVDNFIQKDLESIHEQSKKLI
QKTARGDVQSKGDYLLAAHGFDVEKYRRTVSRLDLKQAFEPLEPIGETDIEGYLKHEHDM
ILLSSVEESKRHTSSCFYKNFNDHLEDDWKSAKESLMKTLNLHKAYQSQQFRPSLGLNDS
VRKPSKYSSFIVSSGNSTPFSSPINQNTTLMAPTPKRGKTTMDERMIAYSTVVYNINKTM
KADQTTRIIDQFSEAAKYIEESVARKREVTECWRLLSFMINENNVHGEISQKDLLRGAKE
YMETSYVQYIKDLLGIEGEVPDKLKLIEQFVAETTKNILPEHLGESINGNYIWPVLFYCL
RCGFIEEALRFTNDHIAYFSQVIISALENKKEAQTSSSSSLEQQLHELYRKIPPNRLFQH
AVYLVLGRCDVKKTIPQIFSKTEDFMWLKLSIIRDDSNYTLQDLQKIVTSHGPKHFCPKK
NSLLYFKLLLCTLQFERAIQYLCSRQSEGYHVEAVHFAFTLYFYDLLNVSEDTSAPLLTE
KDGCQLNFHFLIKDYIRIFAHTDPCIAASYFYIFYKRDEKKKYFKSIKELIIEGKDVSVL
LGHVDIDGKLKNGFLHYFLDSFDFLELAESCAQLYNEAGRYRDSVDIYSMALLYNFSLMP
DLSVDTPNRLKKYIHSILAIMIDELSQVLTGGENREEVKQLASKVFKNFTDNKILQIIEQ
SNKKNFETFKMLLSLTKVFDSFLNRNYDRTLADLQQLQIVPFKKQELESISLRQLDKKIQ
KKLPDILFVAMCTLCHLHSSSRSHSQNEIKDMASNVMSFAGLNEELVSSDVTTQLLQFVN
RMK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcaccgttgcttccatcgcttctgctggcggaaagtcatcaacaaacaataac
aataattttaaaatggatttaatggatcttttggataggtctcaacaattgttaccggtt
gttgataattttattcaaaaagatttggaatctattcatgaacaatctaaaaaattaatt
caaaaaacagcaagaggagatgttcaatcaaaaggagattatttgcttgctgctcacgga
tttgatgtggaaaagtatagaagaacagttagtagattagatcttaaacaagcctttgaa
cctttggaacctatcggagaaacagatattgaaggttatttaaaacacgaacacgatatg
attcttctctcttctgtagaagaatctaaaagacatactagtagttgtttttataagaac
tttaatgatcacttggaggatgattggaaatcagctaaagaaagcttgatgaaaactttg
aacttacacaaagcttaccaaagtcaacaatttagaccatctcttggtttgaatgactct
gtcagaaaaccatctaagtattcatcattcattgtttcatcaggaaattctacaccattc
tcgtctcctattaatcaaaatacaactcttatggctccaactccaaagagaggtaagact
acaatggacgaaagaatgattgcctatagcactgttgtttataatattaacaagactatg
aaggcagaccaaactactagaattattgatcaattctctgaagctgccaaatatattgaa
gaatcagtagcaaggaagagagaagttacagaatgttggaggttattgagtttcatgatc
aatgaaaataatgttcatggtgaaatctcacaaaaggaccttttacgaggagctaaagaa
tatatggaaacttcctatgttcaatatattaaagatttattaggtattgaaggagaagtt
cctgataaattgaagctcattgaacaatttgttgctgaaacaactaagaatattttaccg
gaacacctcggagaatctattaatggaaattatatttggccagtattattttattgttta
agatgtggtttcatagaagaagctcttagattcaccaatgaccatattgcctatttctct
caagtcattattagtgctttggaaaataagaaggaagctcaaacttctagctcttcaagc
ttggaacaacaattgcacgaattatatagaaagataccaccaaatagattattccaacat
gctgtatacttggttttgggtagatgtgacgtgaagaagaccattccacagattttctct
aaaactgaagactttatgtggttgaaactttccataataagagacgattcaaattataca
ttacaagatttacaaaagattgttacatcacatggaccaaaacatttctgtccaaagaag
aactctctactctactttaagcttttgttatgtactttgcaatttgaaagagccattcaa
tatctctgtagtcgtcaaagtgaaggatatcacgttgaagctgttcactttgcattcacc
ctttacttctacgatctccttaacgtttccgaagacactagtgctcctcttttgacagag
aaggatggttgtcaacttaacttccacttcttaatcaaagattacataagaatattcgcc
catactgacccatgtattgctgcttcatacttttacattttctataagagagatgaaaag
aagaaatacttcaagtctatcaaggaattgataattgaaggaaaggatgtatctgtactt
ttgggtcatgtagatattgatggaaaattgaagaatggatttttacactacttcttagat
tcttttgatttcctggaattggccgagtcatgtgctcaattatacaatgaagcaggtaga
tatagagattcagtagatatttattcaatggctttattatataactttagtttaatgcca
gatctttctgttgatacaccaaatcgtttgaagaaatatattcattctattcttgccatt
atgattgatgaattgagtcaagtattgaccggaggtgaaaatagagaagaagttaagcaa
cttgcctctaaagtctttaaaaactttactgataacaagattcttcaaattattgaacaa
agcaacaagaagaactttgaaactttcaagatgcttctcagtcttacaaaagtatttgac
agcttcttgaatagaaattacgatcgtactcttgcagatttacaacaacttcaaattgtt
ccattcaaaaagcaagaattggagagtatttcattaagacaactcgataagaaaatacag
aagaaactaccagatatcttatttgtagctatgtgtactctttgccatttacattcttca
tccagatctcactctcaaaatgaaatcaaggatatggcctcgaatgtaatgtcatttgct
ggtcttaatgaagaattggttagcagtgatgtaactactcaactcttgcaattcgtaaat
agaatgaagtaa
DBGET
integrated database retrieval system
