Naegleria gruberi: NAEGRDRAFT_78599
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Entry
NAEGRDRAFT_78599 CDS
T01241
Name
(RefSeq) dead box helicase protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_78599
03009 Ribosome biogenesis [BR:
ngr03009
]
NAEGRDRAFT_78599
Enzymes [BR:
ngr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NAEGRDRAFT_78599
Spliceosome [BR:
ngr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
NAEGRDRAFT_78599
Ribosome biogenesis [BR:
ngr03009
]
Eukaryotic type
90S particles
Helicases
NAEGRDRAFT_78599
Pre-60S particles
NAEGRDRAFT_78599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pox_TAP
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
8849615
NCBI-ProteinID:
XP_002680910
JGI:
Naegr1_78599
UniProt:
D2V4V1
LinkDB
All DBs
AA seq
657 aa
AA seq
DB search
MPAHIKFNKNGTKTLKDASGNVSTLDASENVQLRKKQSVETIVLPVTEDAEGNAVASKMK
FEEVEGIHPQLLKSLKKEFGFEYMTAIQHLTIPNALGEKGKGKDIIAQAATGQGKTLAFL
VPSLSCMMENEKNVHGIYIMVLAPTRELALQIQTVADKLLKHTNYKAACVIGGNKVSVEQ
AQLADPTVRVLIASPGKCLDHIQRESLDCTHLKFFILDEADRLLDSGFEETLKKIVMQLP
KQRQTYLFSATMTDKVDDLAHISLKNDIMKLGLDNGGSKRVSTLEQRYYEVPNDKKMAAL
VSVLRNNVDKKIITFVSTKLSVEFATTVLQNASGVGNVVQLSGNMTQEKRSEIFFQFMED
RNPGILVATNVAARGLDFPNVDLIVQFDIPEQPADYFHRAGRTARAGKKGLSVLFLTPRE
KEVALQYFNMMLNSDKEDEKDWEKLGELDNKVTDRELDEIQREVCSIVQNNQLNRDAFKL
VNTYGSVFNMFARKLGFKMNDFDEEGLKSSFGLKSRGGFQNNNNGGGFKKNFDKYNDNKP
SFNNDKKFNRFNKEEETPQAEESNQEESTEDANPKKRGLMEFLDANTEKDDFRGGRGGRG
GRGGRGGFRGGRGGRGGGRGGYNNNWNNDNNNGGSSSWNNDNNGGESKPFVKKHKKF
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctcacatcaaatttaacaagaatggtaccaagacattgaaggatgccagtggt
aacgtctcaacacttgatgcttctgaaaatgttcaactcagaaagaagcaatctgttgaa
actatcgtgcttccagtcactgaagatgccgaaggtaatgctgttgcttctaaaatgaaa
tttgaagaagtcgaaggaattcatccacaattattaaaatctttaaagaaggagttcgga
tttgaatacatgactgctatccaacatttaacaattccaaatgctctcggagaaaagggt
aagggaaaggatattattgctcaagcagctacaggtcaaggtaaaactcttgccttcttg
gttccatcattgtcctgtatgatggaaaatgaaaagaatgttcatggtatttatattatg
gttttggctccaacaagagaattggctttgcaaattcaaactgttgctgacaagttgtta
aaacatactaattataaggctgcttgtgttatcggaggtaacaaggtttctgttgaacaa
gctcaattagctgatccaactgttagagttttaattgcctcaccaggtaaatgtttggat
cacattcaaagagaaagtcttgattgcactcatcttaaattctttattttggatgaagct
gatcgtttgttggattctggttttgaagaaactttgaaaaagattgttatgcaattacca
aaacaacgtcaaacctatctcttctctgccacaatgactgataaggttgatgatttggct
catatttctttaaagaatgatattatgaaacttggtcttgataatggaggttcaaagaga
gtttctactttggaacaaagatattatgaagttccaaatgataaaaagatggctgctctc
gtttcagttttgagaaataatgtagataagaagattattactttcgtcagtacaaaattg
tcagtagaatttgcaacaactgttttacaaaatgcatcaggagttggaaatgttgttcaa
ttgagcggaaatatgacacaagaaaagagaagtgaaattttcttccaatttatggaagat
agaaatcctggtattttggttgctactaacgttgctgccagaggtctcgatttccctaat
gtcgatttgattgttcaatttgatattccagaacaacctgccgattatttccacagagca
ggtagaactgctagagctggtaagaagggtctctcagttctcttcttgactccaagagaa
aaggaagttgctctccaatactttaacatgatgttgaatagtgataaggaagatgaaaaa
gattgggaaaagcttggtgaacttgataataaggttactgatagagaattggatgaaatt
caaagagaagtttgttcaattgtccaaaataatcaattgaatagagatgctttcaaactt
gttaatacttatggtagtgttttcaatatgtttgctagaaagttgggtttcaagatgaat
gattttgatgaagaaggtttgaaatcatcatttggtttgaagagcagaggtggcttccaa
aataataataatggaggtggtttcaagaagaactttgacaagtacaatgacaacaaacca
tcattcaataacgataagaaattcaacagatttaataaggaagaagaaactccacaagca
gaagaatcgaatcaagaagaatccactgaagatgccaatccaaagaagagaggcttgatg
gaattcttagatgccaatactgaaaaggatgactttagaggaggtcgtggtggtagaggt
ggaagaggcggaagaggtggcttcagaggaggtcgtggtggtagaggtggtggccgtggt
ggttacaataataactggaataatgataataacaatggtggatcatcgtcatggaataat
gataacaatggtggtgaaagcaaaccatttgttaaaaagcataagaaattctaa
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