Naegleria gruberi: NAEGRDRAFT_78605
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Entry
NAEGRDRAFT_78605 CDS
T01241
Name
(RefSeq) RNA polymerase II elongator complex subunit
KO
K11373
elongator complex protein 1
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngr03016
]
NAEGRDRAFT_78605
Transfer RNA biogenesis [BR:
ngr03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
NAEGRDRAFT_78605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
A-sol_ELP1
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
TPR_ELP1
HB_ELP1
Beta-prop_WDR19_1st
TPR_GEMI5
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
8860549
NCBI-ProteinID:
XP_002680748
JGI:
Naegr1_78605
UniProt:
D2V4X0
LinkDB
All DBs
AA seq
1271 aa
AA seq
DB search
MRNLQLIHHQEISLVEALIANNDEVVSCTSTDSDVLFGLSKNGILFQVDIKEGAIVKTVN
LGDIDGITPQAEMIDIQYVAELESLIIISQFDIITFNISNDTSEITASIEEGINAMSWSP
DQEIVIFSTGNGNLLTMSKHFETLTEAPSDLIPTKSNTSTNTAVKQQAKLTEEVSSRFIN
RPLPVEISWRNDGQYFVLNSMDPSDGKRWLRVWERNGNLVSKSEPIDGLLGNVVHYRPDG
SIIGTHQYHPGKKETTIAFFERNGLQHYDFVLEKGMSDIYSLQWNSTSDVLCVTFKSASR
ENTVLVQLWYRGNYHWYLKQEYSFNESEQAPTHITWDSESAYRLHIFCKNANYYCYDLCW
DHNMSHGMTSENPCFMAVINGLKLNLTPLRYAVIPPPMCAESITFDLPINCVSFSDSSRC
LAQLSDGSFHLYQFSTSNKPPKFGLPPSKLGSIKPLSNNPVRLLTMINENTFCFVPLTIP
GKSDALVICTINEDFTCETREVSYPESILRIAYHSYTGNLFIEGESGALFKQKINEDIPE
ELEERFEYPCQIIAPTMMGEEEVVVGLNHRGILFIGSHNVVSNCSSFSLTDQFLLFTTMS
HKLRIINLHLSVYDAVDIAASGPTSKYDETFREIERGARLVCAVPSDLNVILQMPRGNLE
GITPKALVLSRVRSLLNNFEYGKAVVATRKYRIDMNIIYDHNPESFINNAKKFVEDVDNA
DYINLFISTLTNEDITKTKFAGYHSDGKTVKGEHQTTITEVNKINRICDKLREVLNEVDK
KKFISSILTTYAKYQAPMLEEALQLIRELKAANERKHSEADEALSYLVFLIDVNILYDIA
LGMYDFDLVLMVAQKSQKDPKEYLPFLANLKKMEQYYRQYSIDMHLSRFEKALENISKAG
AEHFPEAVALIREKGLFKLGMQLYESDKDKLLVIFEAYGDYLVSVGNHKQAAFSFLKCKK
FEKAQQSFLEAGEYEFVFSLTKTLNQQAQDIKKIAKSAMIIMEAKKNYIASSNICRDYLN
DNEEAVLRLVAGKEWKEAIRVAISTGRSDLIETHIKQGVFDSAKEITNDLAENETKLSKY
ISRLKELREEKERILREQLLLQQHNDGEFGEDMPHNFDALSEASSMQSGISGYSGVSVLS
TRSSVSSVVSKRTISRKKKNREKLKKGSPFEEGTLVSRIESLIPSSVSISSVSSLLEVLI
YFDKFEEAKALQVGLETLIKTCRDNAELIEEPFQPPQIENEPVPPTRYPRKVAEIIGGDL
DKLSWKLNLLE
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacctccaattaattcatcatcaagaaatttctcttgttgaagctctgattgcc
aacaatgatgaagttgtttcttgtacctccaccgacagtgatgtcttgttcggattatca
aagaatggtattctctttcaagtggatattaaagagggtgctatagtaaagacggttaat
cttggagatattgatggaattacaccacaagcagaaatgattgatattcaatatgttgca
gaattggaatcacttattattatttctcaatttgatattattacttttaatatttctaat
gatactagtgaaattacagcttctattgaagagggtatcaacgcaatgtcttggagtcct
gatcaagaaattgtcatcttctcaacaggtaatggaaatttacttaccatgtccaaacat
tttgaaactctcacagaagctccttccgatttaataccaacaaaatccaatactagtaca
aatactgctgttaaacaacaagcaaaacttacagaggaagtttcctctcgtttcataaat
agacctttaccagttgaaattagttggagaaatgatggtcaatactttgttttaaatagt
atggatccatccgatggaaagagatggttaagagtttgggaaagaaatggaaatttagtt
tcaaagtcggaaccaattgatggtttattgggtaatgttgttcattatagacctgatggt
agtattattggtacacaccaataccatcctggtaaaaaggaaactactattgctttcttt
gaaagaaatggtttgcaacattatgattttgttttagaaaagggaatgagtgatatttat
tcacttcaatggaattccacttcagatgttttgtgtgtcacattcaaatcagctagtaga
gaaaatacagtccttgttcaattgtggtacagaggaaattatcattggtatctcaaacaa
gaatattcattcaatgaaagtgaacaagctccaactcatattacttgggattcagaatca
gcatatagacttcacattttctgtaagaatgctaattattattgttatgatttatgctgg
gatcacaacatgtcacatggaatgacatcagaaaatccatgtttcatggccgtgattaat
ggattgaaattgaatttgacaccactcagatatgctgtcattcctcctccaatgtgtgct
gaaagtattacatttgatttaccaattaattgtgtttcattcagtgattcttcaagatgt
cttgctcagttatctgatggatcattccacctctatcaattttccacctctaacaaacca
ccaaaatttggtttaccaccaagcaaactaggatctatcaaaccactttcaaataatcca
gttagacttttgaccatgattaatgagaatactttctgttttgttccacttacaattcca
ggtaaatcagatgccttggttatttgtactattaatgaagatttcacgtgtgaaacaaga
gaagtctcctatcctgaatccattctcagaattgcttaccattcatataccggtaatttg
ttcattgaaggagaatctggtgctctctttaaacaaaagattaatgaagatattccagaa
gaattagaagaaagattcgaatatccatgtcaaattattgctccaaccatgatgggcgag
gaagaagttgttgttggtttgaatcatagaggtattttatttattggttcacacaatgtt
gtttccaattgttcctcattctctctcactgatcaattcttacttttcacaaccatgtca
cacaagttgagaattatcaatctccatctttcagtttatgatgctgttgatattgctgct
agtggcccaacttcaaagtacgatgaaacctttagagaaattgaaagaggtgccagatta
gtttgtgcagttccatcagatcttaacgttattcttcaaatgccaagaggtaacttggaa
ggtattacccctaaggctcttgtactctctagagttagatcattattgaataactttgaa
tatggaaaggctgttgttgcaactagaaagtacagaattgatatgaatattatttatgac
cacaacccagaatcattcattaacaatgcaaagaagttcgttgaagatgttgataatgca
gactatatcaacttgttcatttcaaccttgaccaatgaagacattaccaagactaaattt
gctggttatcattctgatggtaaaacagtaaagggcgaacatcaaaccacaatcactgaa
gttaacaagattaacagaatttgcgacaagctcagagaagtccttaatgaagttgataag
aagaagtttatttcctctattctgacaacctatgctaaatatcaagcaccaatgttagaa
gaagctttgcaattaattagagagctcaaagctgctaatgaaagaaagcattcagaagct
gatgaagctttgagttatttggtattcttgattgatgtcaatattctttatgatattgct
ttgggaatgtacgactttgatttagttttgatggttgctcaaaaatctcaaaaggatcca
aaagagtaccttccattcttggctaatctcaagaaaatggaacaatattatagacaatac
agtatagatatgcatctgtcaagatttgaaaaggctttggaaaatatttccaaggcaggt
gctgaacatttccctgaagctgttgctctcattagagaaaagggtctctttaaattgggt
atgcaattatatgaaagtgacaaggataagcttttagttatttttgaagcttatggtgat
tatttggtttctgttggcaatcacaaacaagctgccttctctttcctcaaatgcaaaaag
ttcgaaaaggctcaacaatcattcttggaagctggtgaatatgaatttgtattctcactt
accaaaactttgaatcaacaagctcaagacattaagaagattgctaagagtgctatgatt
atcatggaagctaagaagaactatattgcctcctcaaatatttgtcgtgattacctcaat
gataatgaagaggctgttcttagattggttgctggtaaggaatggaaggaagcaatcaga
gttgccatttcaactggaagaagcgatcttattgaaacccacatcaaacaaggagttttt
gattctgctaaggaaattaccaatgacttggccgaaaatgagactaaattgtccaaatat
attagtcgtcttaaggaattgagagaggaaaaggaaagaatattgagagaacaattatta
ttacaacaacataatgatggagaatttggtgaagatatgccacacaattttgatgctctc
tcagaggctagtagtatgcaaagtggtatcagtggttattctggtgtctcagttttatct
acaagatcatctgtttcatcagtcgtttcaaagagaacaatttcaagaaagaagaagaat
agagaaaaactgaagaagggttcaccatttgaagaaggtactttggtttcaagaattgaa
tcccttataccatcatcagtgtctatttcttccgtttcttcacttttggaagttcttatt
tactttgacaaattcgaggaggctaaagctttacaagttggtctcgaaacccttatcaag
acttgtcgtgacaatgccgaattgattgaagaaccattccaacctccacaaattgaaaat
gaaccagttcctccaacaagatatccaagaaaagttgctgaaattattggtggtgatttg
gacaagttatcttggaaattgaatttacttgaataa
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