Naegleria gruberi: NAEGRDRAFT_79094
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Entry
NAEGRDRAFT_79094 CDS
T01241
Name
(RefSeq) tRNA pseudouridine synthase family protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngr03016
]
NAEGRDRAFT_79094
Enzymes [BR:
ngr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NAEGRDRAFT_79094
Transfer RNA biogenesis [BR:
ngr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NAEGRDRAFT_79094
Prokaryotic type
NAEGRDRAFT_79094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
8859866
NCBI-ProteinID:
XP_002679250
JGI:
Naegr1_79094
UniProt:
D2V9Q6
LinkDB
All DBs
AA seq
758 aa
AA seq
DB search
MKRTLEEGSEEQSKKLKIAQDKNPLSPYCDEESSVGISKYVDVILNGDSLDISLPPFTGI
MKQRFSDFIVHEIDRNGKVIYLTSTEIPESIKDKRSKDIDLDPEAKKENERKGIEEFKSI
ISDQTIVAGIEDFLQKHQETEDSLVEIVKQRKKIEEADVPTHLIKENDKNNRSKIHNIIK
EHFSHVMVSDTLNKDNDQYVRLRYQFQSFTLQTLFLNNQNNSKAKKREKRDNKKKGGRRE
QNNPATQSYFDPRQFAWPKERPNYIQFVLYKENSETTEIIGEMCRILKLKQKNFQIAGTK
DKRGITTQRVTGYQISAEKLMQVNQKCHKMVKVGNFEYVDRPLKLGDLSGNRFTLVLRDL
KIPEGSPFSNRNVEDIFRERIEQLNKYGYINYFGMQRFGITYNSVKREYHSDYPTHLLGQ
HLLKSNWKTLAKIILIAGIQNVRDQRAKQTIIDFTEGKISAEQCYNSLPKFKFNTEKIML
NSYVKTSENDHLAAIQALPMNLLSMYIHAYQSLVYNHMVSLRIEKYGLKVVVGDIVVSRS
ELKSCEDPKLTFESPITRIETEEQAQKYNIEDVVMSIPGYDIQFPSTEFVNKETYYKFML
ENGGITEEDYKKHLSQYRTFGAYRFMIEKAKDIEFEFKDYNPETNKLVETDYDNNITKKP
LEQIPCENTKKAAIISFSLNSSNYATMFVRELIRLPSVIDWKWIESNGNPQQQEEQQEQE
QTNEDDEVNDEEQSLATEQDHDETNPQEDVIADANMCE
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaacattagaagaaggttcagaagaacaatctaaaaaactcaagattgcccaa
gataagaatccactctcaccatattgtgatgaagaaagttctgttggtattagtaaatat
gttgatgtaattttaaacggagattcattggatatttctttacctccattcactggtatt
atgaaacaaagatttagtgattttattgttcatgaaattgatagaaatggaaaggttatt
tatttgacaagtacagaaattcctgagagtatcaaggataaaagatcaaaggatattgat
ttggatccagaagctaaaaaggaaaatgaaagaaaaggaattgaagaatttaaatcaatt
atttctgatcaaacaattgttgctggtattgaagatttcttacaaaagcatcaagaaact
gaagattcacttgttgaaattgttaaacaaagaaaaaagattgaagaagctgatgttcca
acacatttaattaaagaaaatgataagaataatagatcaaagattcacaacattatcaag
gaacatttcagtcatgttatggtttcagatactttaaataaggataatgatcaatatgtt
agattgagatatcaattccaaagtttcactcttcaaactttattcttgaataatcaaaat
aatagtaaagccaagaagagagaaaagagagataacaaaaagaagggaggaagaagagaa
caaaataatccagcaactcaatcatatttcgatccaagacaatttgcttggccaaaagaa
agaccaaattatattcaatttgttttatataaggaaaatagtgaaaccactgaaattatt
ggtgaaatgtgtagaattttgaaattgaaacaaaagaatttccaaattgcaggtacaaaa
gataagagaggcatcacaactcaaagagttactggttatcaaattagtgctgaaaaatta
atgcaagttaatcaaaaatgtcacaaaatggttaaagttggtaattttgaatatgttgac
agaccattgaaacttggtgatttgagtggtaacagatttacacttgttttaagagattta
aaaattccagaaggaagtccattttcaaatagaaatgttgaagatattttcagagaaaga
attgaacaacttaacaagtatggttatatcaattattttggtatgcaaagatttggtatt
acttacaatagtgttaagagagaatatcatagtgattatccaactcatttattgggtcaa
catcttttgaaatccaattggaaaactttagctaaaattattttaattgctggtattcaa
aatgtcagagatcaacgtgctaaacaaacaattattgattttacagaaggaaagatttca
gctgaacaatgttataattcacttccaaaattcaaatttaatactgaaaagatcatgttg
aattcctatgtgaaaacatctgaaaatgatcatttggcagcaattcaagcattaccaatg
aatttattatccatgtatattcatgcctatcaatcacttgtatataatcatatggtttca
ttgagaattgaaaaatatggattgaaagttgttgttggagatattgttgtttctagaagt
gaattaaagagttgtgaagatccaaaattaacatttgaaagtccaattactagaattgaa
actgaagaacaagctcaaaaatacaatattgaagatgttgtaatgagtattccaggttat
gatattcaattcccatccactgaatttgttaataaggaaacttattataaattcatgtta
gaaaatggtggaattactgaagaagattataagaaacatctttcacaatatagaacattt
ggtgcctatcgtttcatgattgaaaaagcaaaagatattgaatttgaatttaaagattac
aatccagaaacaaacaaattagttgaaactgattatgataataacattacaaagaaacct
ttggaacaaattccatgtgaaaataccaaaaaggcagctattatttccttctctctcaac
tcttccaattatgcaaccatgttcgttcgtgaactaattcgtcttccatctgttattgat
tggaaatggattgaaagtaatggaaatccacaacaacaagaagaacaacaagaacaagaa
caaacaaatgaagatgatgaagttaatgatgaagaacaatcacttgctactgaacaagat
catgatgaaaccaatccacaagaagatgttattgctgatgctaatatgtgtgaataa
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