Naegleria gruberi: NAEGRDRAFT_79190
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Entry
NAEGRDRAFT_79190 CDS
T01241
Name
(RefSeq) WD40 repeat domain-containing protein
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
ngr
Naegleria gruberi
Pathway
ngr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NAEGRDRAFT_79190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngr03009
]
NAEGRDRAFT_79190
Ribosome biogenesis [BR:
ngr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
NAEGRDRAFT_79190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_RIG_2nd
ANAPC4_WD40
Utp12
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
NBCH_WD40
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
8859506
NCBI-ProteinID:
XP_002679133
JGI:
Naegr1_79190
UniProt:
D2VA93
LinkDB
All DBs
AA seq
551 aa
AA seq
DB search
MFLQKVSRQQTNIELDESHGLRNYTTQNENYVMKNFTEFSPVDSSNFGLVNHIEFHPTRN
RQFLITHKNSVQIVDEEYKKIIRYTKFQRDSQLYSASYRPGDGLLFAVGTNSGVVKLFQS
YDKELTAQRLNQPIKIIFTSSKNEHDYTAIQLTRFLSQQHSDNILAGSDDGVARLFNIIS
GKKVREFSRHSDYIKAGCIFSNGTESSNDISSSPDLFATGAYDHLIKVWDVRESDNSACV
MQFDHGAPVECVVKHPTAPIMYSCGGNYFKVWDLLQRREMLTMHGSHQKTITSLSLASGG
GNYLMTSGLDNLTCFFKIDENYNQIHNISFDGPVMANAISRDERQIVLGLNGPARVLKSQ
RIDRKVLRADIYREEMTKENYKNFVNSALLNQIFEMQEEIFLPGKRSVNLLHFKSQLSKY
NYKLALQKAVTKFKEQPVIVMSLIAELEVRNETLNAINAMDETRLSNVLQFINMHIRDPR
FSTSLIPFTQIVLKHYGQVVGLSEKVDNLLRTLRKKINQEIQAQEKLCQLKGILDMLMIT
NLSYTPKPTVD
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgttccttcaaaaagtttcacgacaacaaaccaatattgaattggacgagagtcatgga
ctcagaaactacacaacacaaaatgaaaactatgtaatgaagaattttacagagttctca
cctgttgatagctcgaactttggattagttaatcatatagaatttcatccgacaaggaat
cgacaattcctcatcacacataaaaattccgtacaaatagttgatgaagaatataaaaag
attattcgatatactaaatttcaaagagattctcaattatatagtgcaagttatagacca
ggagatggtttattgtttgcagttggtactaatagtggtgttgttaaactttttcaatcc
tatgacaaggaattgacagcacaaagattgaaccaaccaattaaaattattttcacaagc
tcaaagaatgaacatgattatacagctatacaattaactagattcctctctcaacaacat
tctgacaatattttagcaggtagtgatgatggtgttgctagattatttaacattatttca
ggaaagaaggtcagagagttttcaagacactctgattacatcaaggcaggatgtatcttt
agtaatggaactgaaagcagcaatgatatttcttcttcaccagatttatttgcaacaggt
gcttacgaccatctcattaaggtttgggatgtaagagaatcagataatagtgcttgtgtc
atgcaattcgatcatggtgctccagttgagtgtgttgttaaacatccaactgctccaatc
atgtacagttgtggtggaaattactttaaagtttgggatcttttacaaagaagggaaatg
ttaaccatgcatggatctcaccagaaaacaattacatccctttcacttgcatcaggtggt
ggaaattatttaatgaccagtggtttggataatttaacatgtttcttcaagattgatgaa
aattataatcaaattcacaacatttcatttgatggaccagttatggccaatgccatttca
agagatgaaagacaaattgttttgggattgaatggacctgctagagttttgaaatctcaa
agaattgatagaaaagttttaagagctgatatttatagagaagaaatgacaaaggaaaac
tataagaactttgtcaatagtgccttgttaaatcaaattttcgaaatgcaagaagaaata
ttcttaccaggaaaaagatctgtaaatttattacacttcaagtctcaactctccaaatat
aattacaaacttgctttgcaaaaggccgttaccaagtttaaggagcaacctgtcattgtt
atgagtttgattgccgaattggaagttagaaatgaaaccttgaatgctatcaatgctatg
gatgaaacacgtttgtccaatgttttacaatttatcaatatgcacattagagatcctaga
ttttccacctccctcattcctttcacacaaattgttcttaaacattatggccaagttgtg
gggttgagtgaaaaggttgataatcttttgagaactttgagaaagaagattaatcaagaa
attcaagcacaagaaaaattatgtcaactcaagggtattttggacatgttaatgattacc
aatttgagttacactccaaagccaactgttgattaa
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