Naegleria gruberi: NAEGRDRAFT_79219
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Entry
NAEGRDRAFT_79219 CDS
T01241
Name
(RefSeq) WD40 domain-containing protein
KO
K14855
ribosome assembly protein 4
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngr03009
]
NAEGRDRAFT_79219
Ribosome biogenesis [BR:
ngr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
NAEGRDRAFT_79219
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
RMC1_N
WD40_RFWD3
NLE
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_DCAF4
eIF2A
Beta-prop_Vps41
Ge1_WD40
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_NUP159_NUP214
WDR54
Beta-prop_WDR75_2nd
WD40_like
Motif
Other DBs
NCBI-GeneID:
8859159
NCBI-ProteinID:
XP_002678830
JGI:
Naegr1_79219
UniProt:
D2VAJ5
LinkDB
All DBs
AA seq
548 aa
AA seq
DB search
MNAKKSSAQKRKLSEATTTSTTNEASSSSGDLIENQAKQLKTSSEETLTGIASERRYFVE
FVSGIDDEKSGTTVEIDANMSKLQLNQLLNSNLFLDNTEELPYSFSVNGEEIQASVRDTL
MATLTEQLNSKNQLALKKRQDLFDFASTQDAPLKIVYHPQALFRVRPVSRCTSTLEGHSE
AILSVNFSPNGEQLATGSGDNTVRIWDLNTETPQHTLKGHESWVLCVAWSPDAKKLASGS
KDCNIKIWYGDSGKKCGKVLKGHKKWITGLSWEPFLKNTACKRLASCSKDGTIIIWDTVM
TQKEFTLSGHSKGVSGIMWGLNDILYSCSQDCTIRLWNTDTKQCVQVLSGHAHWVNTMSV
STEYFLRRGAFDHNCEPLPEAKEEVDKRKEDLLSLYNKTFGSQPIRIITGSDDNTLILWE
PSKSDKPIARLTGHKGVVNQVKFSPDGRLIASASFDKTIKLWDAQTGKYLCSMRGHVGAV
YQCCWSGDSRLLLSASKDSTAKVWDVQKRQLLNDMPGHYDEVFAVDWSPGGDKAASGGKD
RMLKIWRH
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctaaaaaatcctctgcacagaagagaaaactctccgaagcaacaacaacatcg
acaacaaatgaggcctcttcatcatcgggtgatcttattgaaaatcaagcaaaacaatta
aaaacctcatcggaagaaacactcacaggtattgcatctgaaagaagatattttgttgaa
tttgtgagtggaattgatgatgaaaagtctggtactacagttgaaattgatgctaacatg
tctaaacttcaattaaatcaacttttgaatagtaacctctttcttgataatacagaagaa
ttaccatattccttctctgtgaatggtgaagaaattcaagcaagtgttagagatacttta
atggcaacacttacagaacaattgaattctaaaaatcaacttgctttgaaaaagagacaa
gatttatttgattttgcatcaacacaagatgctcctttaaagattgtctatcatcctcaa
gcattgtttagagttagacctgtcagtagatgtacttcaacacttgaaggtcactctgaa
gctattttatctgttaatttctctccaaatggtgaacaattagcaactggttcaggtgat
aatactgttagaatttgggatttgaatactgaaactccacaacatactcttaaaggtcac
gaaagttgggttttatgtgttgcttggtctccagatgctaaaaaacttgcaagtggtagt
aaagattgcaatattaaaatttggtatggagatagtggtaaaaagtgtggaaaagtattg
aaaggtcacaaaaagtggattactggtttgagttgggaaccatttttgaaaaatactgca
tgtaagagattggcaagttgtagtaaggatggtacaattattatttgggatacagtaatg
acacaaaaggaatttacactttctggtcactcaaaaggtgtttctggaattatgtggggt
ttgaatgatattctgtatagttgttctcaggattgtactattagattgtggaatactgat
actaaacaatgtgtacaagttttatctggacatgctcactgggttaataccatgtctgtt
agtactgaatactttttaagaagaggtgcttttgatcacaattgtgaacctctcccagaa
gctaaagaagaagttgataagagaaaggaagatttattgagcttgtacaataagacattc
ggttctcaaccaattagaataataacaggttcagatgataatactcttattttatgggaa
ccttcaaagagtgataaaccaattgctagattaactggtcacaagggagttgtcaatcaa
gttaaattttcaccagatggtagacttattgctagtgcttcatttgataagacaatcaaa
ttgtgggatgcccaaactggtaaatatttatgtagtatgagaggtcacgttggtgctgtt
tatcaatgttgttggagtggtgactctagattattactttctgctagtaaggattcgact
gctaaggtgtgggatgttcaaaaacgtcaacttctcaatgatatgcctggtcactacgat
gaagtttttgctgtcgattggtctcctggtggtgataaagctgcctctggtggtaaggac
agaatgttgaagatttggagacattaa
DBGET
integrated database retrieval system