KEGG   Naegleria gruberi: NAEGRDRAFT_79219
Entry
NAEGRDRAFT_79219  CDS       T01241                                 
Name
(RefSeq) WD40 domain-containing protein
  KO
K14855  ribosome assembly protein 4
Organism
ngr  Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ngr03009]
    NAEGRDRAFT_79219
Ribosome biogenesis [BR:ngr03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    NAEGRDRAFT_79219
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st RMC1_N WD40_RFWD3 NLE Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_DCAF4 eIF2A Beta-prop_Vps41 Ge1_WD40 Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 WDR54 Beta-prop_WDR75_2nd WD40_like
Other DBs
NCBI-GeneID: 8859159
NCBI-ProteinID: XP_002678830
JGI: Naegr1_79219
UniProt: D2VAJ5
LinkDB
AA seq 548 aa
MNAKKSSAQKRKLSEATTTSTTNEASSSSGDLIENQAKQLKTSSEETLTGIASERRYFVE
FVSGIDDEKSGTTVEIDANMSKLQLNQLLNSNLFLDNTEELPYSFSVNGEEIQASVRDTL
MATLTEQLNSKNQLALKKRQDLFDFASTQDAPLKIVYHPQALFRVRPVSRCTSTLEGHSE
AILSVNFSPNGEQLATGSGDNTVRIWDLNTETPQHTLKGHESWVLCVAWSPDAKKLASGS
KDCNIKIWYGDSGKKCGKVLKGHKKWITGLSWEPFLKNTACKRLASCSKDGTIIIWDTVM
TQKEFTLSGHSKGVSGIMWGLNDILYSCSQDCTIRLWNTDTKQCVQVLSGHAHWVNTMSV
STEYFLRRGAFDHNCEPLPEAKEEVDKRKEDLLSLYNKTFGSQPIRIITGSDDNTLILWE
PSKSDKPIARLTGHKGVVNQVKFSPDGRLIASASFDKTIKLWDAQTGKYLCSMRGHVGAV
YQCCWSGDSRLLLSASKDSTAKVWDVQKRQLLNDMPGHYDEVFAVDWSPGGDKAASGGKD
RMLKIWRH
NT seq 1647 nt   +upstreamnt  +downstreamnt
atgaatgctaaaaaatcctctgcacagaagagaaaactctccgaagcaacaacaacatcg
acaacaaatgaggcctcttcatcatcgggtgatcttattgaaaatcaagcaaaacaatta
aaaacctcatcggaagaaacactcacaggtattgcatctgaaagaagatattttgttgaa
tttgtgagtggaattgatgatgaaaagtctggtactacagttgaaattgatgctaacatg
tctaaacttcaattaaatcaacttttgaatagtaacctctttcttgataatacagaagaa
ttaccatattccttctctgtgaatggtgaagaaattcaagcaagtgttagagatacttta
atggcaacacttacagaacaattgaattctaaaaatcaacttgctttgaaaaagagacaa
gatttatttgattttgcatcaacacaagatgctcctttaaagattgtctatcatcctcaa
gcattgtttagagttagacctgtcagtagatgtacttcaacacttgaaggtcactctgaa
gctattttatctgttaatttctctccaaatggtgaacaattagcaactggttcaggtgat
aatactgttagaatttgggatttgaatactgaaactccacaacatactcttaaaggtcac
gaaagttgggttttatgtgttgcttggtctccagatgctaaaaaacttgcaagtggtagt
aaagattgcaatattaaaatttggtatggagatagtggtaaaaagtgtggaaaagtattg
aaaggtcacaaaaagtggattactggtttgagttgggaaccatttttgaaaaatactgca
tgtaagagattggcaagttgtagtaaggatggtacaattattatttgggatacagtaatg
acacaaaaggaatttacactttctggtcactcaaaaggtgtttctggaattatgtggggt
ttgaatgatattctgtatagttgttctcaggattgtactattagattgtggaatactgat
actaaacaatgtgtacaagttttatctggacatgctcactgggttaataccatgtctgtt
agtactgaatactttttaagaagaggtgcttttgatcacaattgtgaacctctcccagaa
gctaaagaagaagttgataagagaaaggaagatttattgagcttgtacaataagacattc
ggttctcaaccaattagaataataacaggttcagatgataatactcttattttatgggaa
ccttcaaagagtgataaaccaattgctagattaactggtcacaagggagttgtcaatcaa
gttaaattttcaccagatggtagacttattgctagtgcttcatttgataagacaatcaaa
ttgtgggatgcccaaactggtaaatatttatgtagtatgagaggtcacgttggtgctgtt
tatcaatgttgttggagtggtgactctagattattactttctgctagtaaggattcgact
gctaaggtgtgggatgttcaaaaacgtcaacttctcaatgatatgcctggtcactacgat
gaagtttttgctgtcgattggtctcctggtggtgataaagctgcctctggtggtaaggac
agaatgttgaagatttggagacattaa

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