Naegleria gruberi: NAEGRDRAFT_79329
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Entry
NAEGRDRAFT_79329 CDS
T01241
Name
(RefSeq) RNA recognition motif domain-containing protein
KO
K12897
transformer-2 protein
Organism
ngr
Naegleria gruberi
Pathway
ngr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NAEGRDRAFT_79329
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ngr01009
]
NAEGRDRAFT_79329
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_79329
Protein phosphatases and associated proteins [BR:
ngr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
NAEGRDRAFT_79329
Spliceosome [BR:
ngr03041
]
Common components
Common spliceosomal components
SR proteins
NAEGRDRAFT_79329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
8859119
NCBI-ProteinID:
XP_002678677
JGI:
Naegr1_79329
UniProt:
D2VBM1
LinkDB
All DBs
AA seq
286 aa
AA seq
DB search
MGNNSPQRDEPHNNNNNHSPRSSPKRYNDDRRYNDDRHDDRRYNDDRRDDRRYNDDRRYN
ERRYDDRRDDRRSYDERRYDRRPSSSENNVALQEEKSKATSIFLGSLDSNTTENDLRDAF
SKCGEIASVKLGFTKQGHFLRYAFISFANREDTEKAFNAVKSGEISGQNKWDVDYDVGRD
KKSQLGIAPSTRGSRGGRFGGGRGGGSRRYDDDRYSRRDQRYHPYSRRSPPFRGDRGDRS
DRGDRSDRGDRGDRSPSGPRGGYSPRRSPPYDSRRRGGDRYSPRHY
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgggaaataattcccctcaacgtgatgaacctcataataataataataatcactctcct
cgttcttctccaaagagatacaacgatgatagaagatataatgatgatagacatgacgat
agaagatacaatgatgaccgtcgtgatgacagaagatacaatgacgatagaagatacaat
gaaagaagatatgatgaccgtcgtgatgatagaagatcttacgatgaaagaagatacgat
agaagacctagtagtagtgaaaacaatgttgctctccaagaagaaaagtcaaaggccact
tcaattttccttggtagcttggatagtaacacaactgaaaatgatttgcgtgatgctttc
tctaagtgtggtgaaattgctagtgttaagcttggtttcactaaacaaggtcactttttg
agatatgccttcatttcatttgccaacagagaagacaccgaaaaggccttcaatgctgtc
aagtctggtgaaatttctggtcaaaacaaatgggatgttgactatgatgtcggtagagac
aagaagagtcaattaggtattgctccatctactcgtggaagtagaggaggtagatttggt
ggaggtagaggaggtggttctcgtagatatgacgatgatcgttatagtagaagagaccaa
agatatcacccatattccagaagatcaccaccattcagaggagatagaggtgacagaagt
gacagaggtgatagaagtgatagaggagacagaggtgatagatcaccaagtggtccaaga
ggtggttactctccaagaagatcccctccttatgattctagaagaagaggcggtgaccgt
tacagcccacgtcactactag
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