Naegleria gruberi: NAEGRDRAFT_80019
Help
Entry
NAEGRDRAFT_80019 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ngr03009
]
NAEGRDRAFT_80019
Ribosome biogenesis [BR:
ngr03009
]
Eukaryotic type
90S particles
Other 90S particles
NAEGRDRAFT_80019
Pre-60S particles
Other pre-60S particles
NAEGRDRAFT_80019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
DUF4042
SCD
Motif
Other DBs
NCBI-GeneID:
8847630
NCBI-ProteinID:
XP_002676395
JGI:
Naegr1_80019
UniProt:
D2VHU1
LinkDB
All DBs
AA seq
1562 aa
AA seq
DB search
MSLHDRLVIPLRSSPTKDASSPENSKKNKLQHLRVNIVPKEGERARSFSQSFSVSNPPKA
KSLRKSLGTSSVADSPIGSPLLASTSLLECSSPRRISMSSMNARHTLIGSSPLMGRLLFE
DSSPTSSSCSSFSMSVNNNIKDTGFFANFEKKNISFVTSMPLRKLRFVKYDSEDPPKREE
QSKEKSYPSFIHEVYKFNDLKLDACKNQFKVSNENEEMIRDFIDDIHHLKEREGFNTNIL
DVSVTREYFSEKKLSTMEEQLLKSINSILFPNIKSIVDNPNNFMSTSREIVAELPLKVPR
LRLIMQLYNTDTVNALLLLMTSCTTPSLRAKISAKRKGRAATSASSAVSNTATKQELASR
AVISTSAPQEQSSYYQFSEALKANAPLAFTMFESVLKKRDVNTGNWKTMCISIEAITETI
YKQKQPLQPTSFYGAILKTLASSQSDAKNCASLLQLFSIVVEHIKPAVVHSSLDFVGQAM
TNIHQSMDKFEYVTIQLVPLLLQINAKLGDVPPQSPLFPKKQQLEKLIFSFLFDTRVQVR
EKCIQTIQQLMEKNQLFLTEDEMVSVYLIEQYQTSSKTRNAEIAMSVIKGIGCLSEKLGE
KNIVVVLQKTLDILLKGNSNNLPANICAEIYRTLKNIFDNNKNIAAPSIAKVIDFLTEKV
CPTLKSDDPKKVIAYIVMMTHAHKCLHRLDKELSASRVHKFFKLIFESLILAKNESEETS
SAAFTNLQNLIWNCFDAELFRERNKNSSMDDDEESPMLAIANTLQTGLDNTHYAKYDLIS
QLTLDTILKIGLVRSRGIKVSSINNCVLDFLLFTSDVLQDLLKRESDKKKEGASALEQTT
LKNARSVYYLEKIVGYCIRVLGPAEAFKEGGITFDGWVLSILINHKVDYSNVPNMKIGQN
DEQDLSKLTGICVNGQLAYWVNVLLPMAKSFYDKSKTTEVDRHGNNSFLTLYEKIWALLP
QFCSYPIDLESQFSTIAPLLGEMINSSAKEGVDYQIKIACCNSLALTINTYHNIATTGKI
PDNIFGLNKNICEKGLRAVANFNKQFIPILFNLYVEQNSKATTADLQNAVGKAITAFFSV
CDHATVTDYFKLVLKKILEINSESDEEKFFGFFDLSITMLNSVPNSCLEIYYKFLIPYLK
ITTSTTPKLQKKAYKGLYILLSSWKRDSGVAMKRETIDEILTIFQSIAEITMSKKFRVKC
FNLLVTKYHDLIFNNPLSTIIIGECIFNIDNTENQKSRDLSISTLKAFIDPLIDNKYTQE
QKQSNVIDFVVRRVLPGLCGKSNSMIASTINALSELLPSYSKYLQPILKDVFDSVTIVLQ
DENVKVVSSLMQFFKRCVTLFDKETLKPYVSLYLNTFFNHSNEKSGGTSLRVQLRFLVTK
LFKKFSFDELKDTVTEKERHHFLKNTFKSMHRVKKTKKDGEKEEEMSDEEPEKKEDSEFA
VNKGKLVINDLPEDEDKDSEESKKFTEKQRTVDLIKQSIARGAPVSKKKEQELNADQLFL
AKLEKRKHKRETKIVFGGAKVKGQGAVDPYAYIPLDPRRLNKRERNKESNFQKFERITKK
KK
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgagtctacatgatcgattggtaatacccttaagatcctctccaacaaaagacgcctcc
tcaccagagaattctaagaagaataagttgcaacatcttcgtgtaaatatagtgccaaaa
gaaggtgagagggcccgatctttttctcagagtttttctgtgagtaatcctccaaaagca
aagtctttgaggaaaagtttaggaacttcatcagttgcggattcaccaatcggatcacca
ttgcttgcatcgacatcattattagagtgttcttcaccaaggagaatatcaatgtcatca
atgaatgctcgacatactctaattggttcctcacctctcatgggaagattattgtttgag
gattcttctccaaccagttcatcgtgcagtagcttttcgatgagtgtaaataataatatt
aaggatacaggtttctttgcaaattttgaaaagaagaatatttcttttgtcacctcaatg
ccactaagaaaacttcgatttgtaaaatatgattcagaagatccaccgaagagggaagag
caatccaaagaaaagagctatccaagctttattcatgaggtgtacaaatttaatgatcta
aagttggatgcttgtaaaaaccaatttaaagttagtaatgaaaatgaggaaatgatcaga
gattttatagatgacattcaccacttaaaggaacgggaaggatttaatactaatattttg
gacgtatcagttacacgagaatacttctcagaaaagaaactgtccacaatggaggagcaa
ttactgaaaagtatcaattccattctatttccaaatattaagagtattgtggataaccct
aataatttcatgtccacttcaagagaaatagttgctgagcttccactaaaagttccacga
ttgagactaattatgcaattatataatactgacactgtgaatgctcttttattactaatg
accagttgcacaactccatcactccgtgctaaaatttcagccaaacgaaaaggaagagct
gcaacatcggcttcttctgctgttagtaacacagccaccaagcaagagttggcctctaga
gctgttatttcaacatcagctcctcaagaacaatcaagttattatcaattttcggaggct
ttgaaggctaatgcccctcttgcttttaccatgtttgaatctgttttaaagaagagagat
gttaatacaggaaattggaaaacaatgtgtatatctattgaagctataacggaaacaatt
tacaaacaaaaacaaccactccaaccgacatcattctatggagcaattcttaaaacactt
gcttcttcacaaagcgatgctaaaaactgtgcatcacttcttcaactcttttcaattgtt
gttgaacatatcaaacctgctgttgtacactcatcattggactttgttggacaagcaatg
acaaatattcaccaaagtatggacaagtttgaatatgtcacaattcaactcgttcctctc
cttcttcaaattaatgcaaaattaggtgatgttccaccacaatctccacttttcccaaag
aaacaacaattagaaaaattaatattttcattcctttttgatactagagttcaagttaga
gaaaaatgtattcaaactatccaacaattgatggaaaagaaccaattattcttaactgag
gacgaaatggtttcagtttatcttattgaacaataccaaacatcaagtaagactagaaat
gctgaaattgcaatgtcagtcattaaaggaattggatgtttgagtgaaaaattaggcgag
aagaatatagtagtagtattacaaaaaactttggacattttattgaagggaaattcaaac
aatttacctgccaatatttgtgctgaaatttatagaacacttaaaaacatttttgataac
aataagaatattgccgcccctagtattgctaaagtgatagatttccttactgaaaaagtt
tgtccaacattgaagagtgatgatccaaagaaggttattgcctacattgtaatgatgact
cacgcccacaaatgtcttcatagacttgataaggaactttctgctagtagagttcacaag
tttttcaaattaatttttgaatcacttattttagcaaagaatgaatcagaagaaaccagc
tctgctgcattcacaaatcttcaaaacttgatttggaattgttttgatgctgaacttttt
agagaaagaaacaagaatagctcaatggatgatgatgaagaatctccaatgttggctatt
gctaacacattgcaaactggattggataatactcattatgctaaatatgacttgatttct
caacttaccttggatactattttgaagattggtttagttagatcaagaggtatcaaagtt
tcatcaatcaacaattgtgttttggactttttactctttactagtgacgtcttgcaagat
ttactcaagagagaatctgataagaagaaagaaggagccagtgcacttgaacaaaccaca
ctcaaaaatgctagatctgtctattatttggaaaagattgttggatactgtattcgtgtt
ttgggaccagccgaagcattcaaggaaggaggtattacatttgatggttgggttttgagt
attttgatcaatcataaagttgattactcaaatgttcctaacatgaagattggacaaaat
gatgaacaagatctttctaaacttactggtatttgtgttaatggacaacttgcttattgg
gttaacgttctcttaccaatggccaagtcattctacgataagagcaagactactgaagtt
gatagacatggaaataattccttcttgactttatatgaaaagatttgggcattgttacca
caattctgtagttatccaatcgatttagaatcacaattttccactattgctccacttttg
ggtgaaatgatcaatagcagtgcaaaggaaggtgttgattatcaaatcaagattgcttgt
tgtaacagtttggcattgactattaacacttatcacaatattgcaacaactggcaaaatt
cctgacaatatctttggtttgaataagaatatttgtgaaaagggtcttcgtgctgttgct
aactttaacaaacaatttattccaatcctcttcaacttgtatgtcgaacaaaactctaaa
gccacaacagctgatcttcaaaatgctgtcggtaaggccattactgccttcttctcagtt
tgtgatcatgcaactgttactgactacttcaagttggttcttaagaagattttagaaatt
aactccgagtctgatgaagagaaattctttggtttctttgatttatctattacaatgctt
aattctgtacctaattcctgtcttgaaatttattacaagttcctcatcccataccttaaa
attactaccagtaccacacctaaattgcaaaagaaagcatacaagggattatacatttta
ctttcatcatggaagagagattctggtgttgcaatgaagagggaaactatcgatgaaatt
ttaacaattttccaatctattgctgaaattaccatgtcaaagaaattcagagtcaagtgt
ttcaacctcttggtcactaaataccatgacttgattttcaataatccactttctacaata
attattggtgaatgtattttcaatattgataacactgaaaatcaaaagagtagagattta
tccatttccactttgaaggcctttattgatccactcattgataacaaatatacacaagaa
caaaaacaatctaatgtgatagattttgttgttagaagagttttaccaggtttgtgtggt
aaatcaaattccatgattgcttctacaatcaacgcattgtctgaacttcttccttcttac
tctaaatatttacaaccaattttgaaggatgttttcgactctgtgacaattgttttacaa
gatgaaaatgttaaggttgtttcatcattgatgcaattcttcaagagatgtgtaacctta
ttcgataaggaaacactcaaaccatacgtatctctttatttgaatacattctttaaccat
tctaacgagaaatcaggaggaaccagtttgagagtacaactcagattccttgtcactaag
cttttcaaaaagttcagttttgatgaactgaaggatactgttactgaaaaggaacgtcat
cactttttgaagaatactttcaagagtatgcacagagtaaagaagacaaagaaggatgga
gaaaaggaagaagaaatgtctgatgaagaaccagaaaagaaggaagattctgaatttgct
gtcaataagggtaaattggttattaacgatctaccagaagatgaagataaggactctgaa
gaatcaaagaagttcaccgaaaagcaaagaactgttgatctcattaagcaatctattgct
agaggtgcaccagtttcaaagaagaaggaacaagaactgaatgctgaccaacttttctta
gccaaactggaaaagagaaaacacaagagagagacaaagattgtctttggtggagccaaa
gtgaaaggtcaaggagctgttgatccttatgcttacattccactcgatccaagaagactt
aacaagagagaaagaaataaggaaagtaatttccaaaaattcgaaagaattaccaagaag
aagaaataa
DBGET
integrated database retrieval system