Naegleria gruberi: NAEGRDRAFT_80522
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Entry
NAEGRDRAFT_80522 CDS
T01241
Name
(RefSeq) nudix motif 21-like protein
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
ngr
Naegleria gruberi
Pathway
ngr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
NAEGRDRAFT_80522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_80522
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
NAEGRDRAFT_80522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
8851568
NCBI-ProteinID:
XP_002674698
JGI:
Naegr1_80522
UniProt:
D2VMA4
LinkDB
All DBs
AA seq
205 aa
AA seq
DB search
MEELKVVDIYDYTFIKWTKKNPQVEKDKSVPERLKRLENNYLTHGMKRTVEAAIAVNIHG
HPHIMLLRIGNSQKGFHKLPGGRCRRDETEEECLKRKLTKRLAPEDPNEIMPEWIVHGVV
SVWYRPNFENSFYPYLPAHITKPKERKLIYLVTIPECTIAYPRNYDFIPMPFFDLYENSK
KFGSIISSLPQVISKFEFNYIYKEK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggaagagttaaaagttgttgatatctatgattatacttttataaagtggacaaagaag
aatccacaagtagagaaggataaatctgttcctgaaagattgaaaagattggaaaataat
tatcttacgcacggaatgaagagaacagtggaggcagctattgctgttaatatacatggt
catcctcatattatgttattgaggataggaaatagtcaaaaaggttttcataaattgcct
ggaggaagatgtagaagagatgaaactgaagaagaatgtttgaagagaaaattaactaaa
agacttgcaccagaagatccgaacgaaataatgccagaatggatagttcatggagttgtt
tctgtttggtatagacctaattttgaaaattcattttatccatatttaccagcccacata
acaaaacctaaagaaagaaaattaatttatctagtcactattccagaatgtaccatagca
tacccaagaaattacgattttattccaatgccattctttgatctttatgaaaactctaag
aaatttggatctatcattagtagtttgcctcaagtaataagcaaatttgagtttaattac
atctataaagagaaataa
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