Naegleria gruberi: NAEGRDRAFT_80698
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Entry
NAEGRDRAFT_80698 CDS
T01241
Name
(RefSeq) DNA repair helicase UVH6
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ngr
Naegleria gruberi
Pathway
ngr03022
Basal transcription factors
ngr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NAEGRDRAFT_80698
09124 Replication and repair
03420 Nucleotide excision repair
NAEGRDRAFT_80698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngr03021
]
NAEGRDRAFT_80698
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_80698
03400 DNA repair and recombination proteins [BR:
ngr03400
]
NAEGRDRAFT_80698
Enzymes [BR:
ngr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NAEGRDRAFT_80698
Transcription machinery [BR:
ngr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NAEGRDRAFT_80698
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
NAEGRDRAFT_80698
DNA repair and recombination proteins [BR:
ngr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NAEGRDRAFT_80698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
HBB
Peptidase_C58
Motif
Other DBs
NCBI-GeneID:
8862454
NCBI-ProteinID:
XP_002674262
JGI:
Naegr1_80698
UniProt:
D2VP13
LinkDB
All DBs
AA seq
753 aa
AA seq
DB search
MPSGTGKTISLLSLITSYQLTEEGKSRKLIYCTRTVPEMEKVLEELGSLIEYRKKYTDSP
IIGVGLSSRKNLCIHPKSQSFLHDGAQVDSVCRGLTASWLRAEAKEKVESSNGTIQPVIS
NNNATATVDDIELCNYFERFIEANPTDTILPNGVYTMRDLKVFGKKKGWCPYFLSRRAIE
YANVVVYSYSYLLDPKISSIISKNLPANSIVVFDEAHNIDNVCIEALSINIDRDILGVAK
SNLTKLEENIANMEKVNSQRLQEEYRRLVDGLGAVGVGRSSDVIRSDDELLSNPVLPGDI
MTEAVPGNIRKAHHFVKFMKRFATHVNKRLQTQKSVNETPEQFLNHVLENIDIDSRSLRF
CSERLLSLMNTLEIKNIYEFNGIKIIMDFATLIGTYQEGFVIIIEPHDPRTPTNPDPVLQ
FSCMDASLAISKPIFGRFKTVVLTSGTLSPLDMYPKLLKFKPIISKSLEMTLTRECICPL
VLTRGSDQVAVTTKYRFRNDASVQRNYGSLLLELSKYIPDGIVCFFTSYQYMEDIVSFWN
SVGLLSSITNHKLVFIETPNTAETAIALENYRKACDCGRGAIFFSIARGKVAEGIDFDGH
YGRCVVMIGVPFQNTESKILKARLNYLRQNFAIKEETFLTFDALRHASQCIGRVIRNKAD
YGIMVLADKRYNQPDKRNKLPKWIAKQIKDTYLNLSTDMIIGIARKYLKEMAQPYTATNQ
LLGPEEIEQRSKKRNFEDVTDLPTEDSQPPQKK
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgggtactggtaaaacaatttctctcttatctttgattacatcttatcaatta
acagaggaaggaaagagtagaaaattaatttattgcacaagaactgtaccggaaatggaa
aaagtattggaggaattaggttcattgattgaatacagaaaaaagtatactgacagtccc
attattggggttggcttgagcagtagaaaaaatctttgtattcacccaaaaagtcaaagt
tttcttcatgatggtgcccaagttgacagtgtttgtagaggtttaacagccagttggctt
agagctgaagctaaagaaaaggtagaatctagtaatggtactattcaaccagtgatttca
aataataatgctacagcaacagtggatgacattgaattatgtaattattttgaaagattt
attgaagccaatcctactgacacaatattaccaaatggtgtttatactatgagagatttg
aaagttttcggaaaaaagaaggggtggtgtccttactttctttcaagaagagccattgaa
tatgcaaatgttgttgtctacagttattcataccttttggatccaaaaatttcttcaatt
atttcaaagaatttaccagctaactctatcgtagtatttgacgaagctcacaacattgat
aacgtctgtattgaagcattatcaattaatatcgacagagatatacttggtgtagctaaa
tccaatcttacaaaactagaagaaaatattgctaacatggaaaaagtaaatagtcaaaga
ttacaggaggaatatagaagacttgtggatggactaggtgctgttggagttggaagaagt
tctgatgtgataagatctgatgatgaattactttctaatccagtattgccaggtgatatt
atgacagaggctgtacctggtaatatcagaaaagctcaccactttgtaaaatttatgaag
agatttgcaacccatgtaaacaaaagattacaaacacaaaagtctgtcaatgagacacct
gaacaatttttgaaccatgttcttgaaaatatagatattgattcaaggtctctaagattt
tgctctgaacgtttattatcacttatgaatactctagaaatcaagaatatatacgagttt
aatggaattaagattataatggattttgccacattgattggtacttatcaggaaggattt
gtaattattatagaaccacacgatccaagaacaccaacaaatcctgatccagttctccaa
ttcagttgtatggatgcatctttagctattagcaaacctattttcggtagattcaaaact
gtagtattaacaagtggtacactctcacctttggatatgtatccaaaattattgaaattc
aaaccaatcatttctaaatctcttgaaatgactttaaccagagaatgtatttgcccactt
gtattgaccagaggtagtgatcaagtggcagtcacaacaaaatatagattcagaaatgat
gcctctgttcaaagaaactatggaagcttacttttggaattatccaaatacatccctgat
ggcatcgtctgctttttcacatcatatcaatatatggaggatattgtttccttttggaac
agtgttggtttattgagttctatcaccaaccacaaacttgtatttattgaaactccaaat
actgctgaaactgcaattgccttggaaaattatagaaaggcatgtgattgtggtagagga
gctattttctttagtattgcaagaggaaaggttgcagaaggtattgactttgacggtcat
tacggtagatgtgttgtaatgattggagttccatttcaaaatactgaaagtaagattctt
aaagccagattgaattatttgagacaaaactttgcaatcaaagaagaaacattccttaca
tttgatgctcttagacatgcttcacaatgtattgggcgtgttatcagaaataaggccgat
tatggtatcatggttttggcagataaaagatataatcaaccagataagagaaataagctt
ccaaaatggattgctaaacaaatcaaggatacctatctcaatttatcaactgatatgatt
attggtattgccaggaaatatttgaaggaaatggctcaaccatacactgctactaatcaa
ttattgggacctgaggagatcgaacaacgatcaaagaagagaaatttcgaagatgttaca
gatttaccaacagaagattctcaacctcctcaaaagaaataa
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