Naegleria gruberi: NAEGRDRAFT_80805
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Entry
NAEGRDRAFT_80805 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
ngr
Naegleria gruberi
Pathway
ngr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
NAEGRDRAFT_80805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngr03021
]
NAEGRDRAFT_80805
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_80805
Transcription machinery [BR:
ngr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NAEGRDRAFT_80805
RNA polymerase I system
NAEGRDRAFT_80805
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
NAEGRDRAFT_80805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW5_SPT5
Spt5-NGN
KOW4_SPT5
KOW
KOW1_SPT5
KOW2_Spt5
KOWx_SPT5
KOW7_SPT5
Ribosomal_uL24m-like
DUF3912
Motif
Other DBs
NCBI-GeneID:
8855700
NCBI-ProteinID:
XP_002673737
JGI:
Naegr1_80805
UniProt:
D2VQ68
LinkDB
All DBs
AA seq
963 aa
AA seq
DB search
MSDNESDYEEENYDEEEEEEEEDNYEPAQKKSKSSKSMFIDDAAQEDDEDEEEEGEEDFH
QQYRKTSVSDLPQPSAQRKNIMADIERRYAGADDEDEDDEVYNDTVRIAQKQQPNLPTPE
DPKLFLVKCKQGKEKEAVMTLLQKHFSVKHSPNKKDRLLITSALFIEGFKGKIYIEAQKE
VHVRHAIEGLSHLIYESGIKLVPLKEMPDVLNVNQLSTKIQDISVGKWVRVKRGTYKGDI
GKVHDVDKARGYCVVVLVPRIDYTGQSSGKRPPQRLFNKELLPQTEQEKVEDAKDQITYS
VYQGNKFHDGYVYKHIHLKSLETKDIIPTNSELQIYYQNESPSTAISLSRKTYFKRGDNV
RVIKGELRGMVGQITNIDEESQVITMLPKSNDINTPLQFTSNQLQKHFSVGQFCRVVGTG
KWEGESGYIVRVSEDDDSIVLYNEVRRCDMNVYSNEIQETTTVASENKLGNYSLFDMVRL
DSQTMGVIVKFDSNKNTSDAQVQVVDNNDVLRQVKLQELGRKQNTKAGYKAPDKSKHLVG
ISDTVKVIDPTSVHFGREGVVKQVFRKFLFCCSIDLIQNAGIFAVPASHCELRGARNRQI
LNSQTSGAAGNTTNKRGFVFTKRRRNHPFTNKTAIITKGPYKGYLGIVKDATDTTARIEL
HSQNKIINVDISWISLQDEKEKRKDTYQTVSTPYHNSGAATPFMPPSTPWDNRDSSKTPI
HTSLGHETPIHRPETPSRSGDAWNPRKPNTPMHDWQETTTPGGVPSTPHDNYTVNTPGIG
MNPITPAYTPGVGAPITPGITTPNTPHGDNSYSYHPITPGIQTPNPVTPHESYNSISTPG
GVFQTPNPDMYGYGSVVTPGMGHSVSTPYGTPGMMHHPTTPGMMHHPTTPGFIGYPGMHP
MTPGLMNPTTPGMHPMTPGMMNPTTPGMHPMTPGMMHPSTPGMHPMTPGSNPITPGNHYD
DDE
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaacgaatccgactatgaagaagaaaattacgacgaggaagaggaggaagaa
gaagaagataactatgaacctgctcaaaaaaaatctaaatcatcaaaaagcatgtttatt
gatgacgctgctcaggaagatgatgaagacgaagaagaagagggtgaagaagactttcac
caacaatatagaaagacatcggtttccgatcttccacaaccatctgcacaaagaaaaaac
attatggctgatatcgaaagaagatatgcaggtgctgatgacgaggatgaggatgatgaa
gtatataacgatactgtaagaattgctcaaaaacaacaaccaaatcttccaacacctgag
gatccaaaattatttttagttaaatgtaaacaaggaaaggaaaaggaagctgtcatgaca
ttattacaaaaacacttcagtgtgaaacattcaccaaacaaaaaagatcgtcttctaatt
acatcagctttgtttattgaaggtttcaaaggaaagatctatattgaagctcaaaaagaa
gttcacgtaagacatgctattgaaggacttagtcatttgatttatgaaagtggaattaaa
cttgtaccattgaaggaaatgcctgatgtcttgaatgtgaaccaactctcaacaaaaatt
caagatatttctgttggaaaatgggtgagagttaaaagaggtacatacaaaggagatatc
ggaaaagtccatgatgtggataaagctagaggatattgtgtagttgtacttgtaccaaga
attgattatactggacaaagttctggtaaacgtccaccacaaagactctttaataaggaa
cttcttccacaaactgaacaagaaaaagttgaagatgcaaaggatcaaattacttatagt
gtttatcaaggaaacaaattccatgacggttacgtatataagcacattcacttaaagtct
ttggaaacaaaggatatcataccaactaatagtgaacttcaaatttattatcaaaatgaa
agtccaagtactgctatttcgttatcaagaaaaacatatttcaagagaggtgataatgta
cgtgttatcaagggtgaattgagaggaatggttggtcaaattacaaatattgatgaagaa
tctcaagtaattacaatgcttccaaagagtaatgatattaacacaccacttcaatttaca
agcaatcaacttcaaaaacacttttctgtaggtcaattctgtagagttgtaggtactggt
aaatgggaaggagaatctggttacattgtcagagttagtgaagatgatgatagtattgtc
ttgtataacgaagtaagaagatgtgacatgaatgtgtactcgaatgaaatccaagaaaca
actactgttgcctcagagaacaaacttggtaactattcattattcgacatggttcgtctt
gattcacaaactatgggtgttattgtaaaatttgattctaataagaacacatctgatgct
caagttcaagttgtagataataatgatgtactaagacaagttaaattacaagaactagga
agaaagcaaaatactaaagctggatacaaagctcctgataagagtaagcatctcgttggt
attagtgatacagttaaagtcattgatccaacatctgtacattttggaagagaaggcgtt
gttaagcaagtttttagaaaattccttttctgttgttctattgatttaattcaaaatgct
ggtatttttgcagtcccagcatctcattgtgaattgagaggagcaagaaacagacaaata
ctgaactctcaaacatctggtgctgctggtaatactacaaataagagagggttcgtattt
acaaagagaagaagaaaccatccattcacaaacaagacagctattatcactaaaggtcca
tacaaaggatacttgggtattgttaaggatgccactgataccactgctcgtattgaactt
cactctcagaataagattattaacgttgatatttcttggatttctttgcaagacgaaaag
gaaaagagaaaggatacttatcaaacagtttctacaccttatcacaattctggggctgct
acaccattcatgccaccttcaactccttgggacaatagagattcatccaaaactccaatc
catacatcccttggtcatgaaactccaatccatcgtccagaaacaccatcccgtagtggt
gatgcttggaatcctcgtaaaccaaatactccaatgcacgattggcaagaaacaacaact
ccaggaggtgtaccatccactccacatgataattatacagtcaatactccaggtattggc
atgaatccaatcactccagcttacactcctggtgtaggtgctccaatcactcctggaatt
accactccaaatactccacatggagacaactcatactcataccacccaattacacctggt
attcaaactccaaatccagttacacctcacgaatcttacaattcaatttcaactccagga
ggtgtattccaaactccaaatcctgacatgtatggttatggttcagttgttacacctgga
atgggacattcagtttccacaccttatggtacacctggtatgatgcatcacccaactact
ccaggaatgatgcaccatccaactactcctggctttattggttatcctggtatgcaccca
atgacacctggtcttatgaatccaactactccaggtatgcatccaatgactccaggtatg
atgaatcctacaacacctggaatgcatccaatgacccctggaatgatgcacccatccact
ccaggtatgcatccaatgacaccaggttcaaatccaattactccaggaaatcattatgac
gatgacgagtaa
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integrated database retrieval system
