Naegleria gruberi: NAEGRDRAFT_80873
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Entry
NAEGRDRAFT_80873 CDS
T01241
Name
(RefSeq) Zinc-finger domain-containing protein
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
ngr
Naegleria gruberi
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
ZnF_RZ-type
AAA_11
AAA_19
AAA_30
DEAD
UvrD-helicase
AAA_22
PhoH
nSTAND3
ResIII
AAA_25
AAA
RNA_helicase
Chp1_domII
Motif
Other DBs
NCBI-GeneID:
8855885
NCBI-ProteinID:
XP_002673615
JGI:
Naegr1_80873
UniProt:
D2VQH5
LinkDB
All DBs
AA seq
1991 aa
AA seq
DB search
MSQQPTQPPPNDNDINILRYPTITPTNNKKPHKGGFIKIPITPNSTNDTIDPQNINQKTN
TSLSTTTIDANVKPVVLNNTSPTDGKRNKPKKKNDASSNALNVGGQSSAASSSLDVVVPP
SPSSEASASSSSTFSKKGREFKPSEHANKRFSQVLLMCGKCNSCLAANTLEASHMFSVFK
DDRTRHAVLKDQNVIGNTLIEKETNFKFEKKNEKYRKTHMLYCKACNQKVGSRFPGNYPD
TELPKRMFDGSDCKVSCKELNNDDGQDVVMNVEEWRTLSSSLRDYGLYPPRHVSSQDSSR
NNSRDGSFKKDFNGKKPVESGTNENKFQKKEFNKKSFEKKNHQPNEPITSIPFISNNEVD
NIFGRNNQGSSSSSPFIRNISPKFGQLSQARVQKDLPPKKEKKDYTIKTVKGIGFYIDNS
LFNENQKEYFIKNLTQEEFKSIFNKGGLLEEQEVNFSIIEKLMKVFAHEQIELSTNKSLI
TPIFSHLMNSLFWRRVVKKYIVQDVIDDEQVKDLITVFHRCLEFCPQEAERVFIEELEKV
YIDKFVSQDYQESIMAIKKRKQALKLANSKMDKGPLPEQQEINENDENEFEEISVFPTFN
ELTSNERFKVRNNVDGPYSSLREYIRTQILLLREDFIHPLKDGIQSFLSNNCNHRSISVF
TDCQFVSVISSDNERELVHSLSFHYPWRRINWECTKKLAFGSLLCLFPQEGSGKNATIVK
SEPIFVTVLDRKSVSKELIYVGLSRVEDFKRLSLVGKYVMFESPAYFAGVRPVIDSLNMI
LNETLIDQSKFTFYDEFIKLKQQTPPQYIERDSFMNLDVIKGDQRRSTQSDLSTGRKTNI
LSNWIEDNETFLDPSQNKAIQHVMRNRVSIVIGPPGCGKTFTGIEIAKLLKSHPDMKNRQ
LICITYTNHALDQFLEGLIDYFPDIVRIGSRSKSQNEKLLNRNLSKMRYLPQYLYVEKQK
CEAELRRLSLTIGATELSIKNPDDSLLRHLAKSFVFNRALSKFPIHLYSKRNPPPETLQA
MFRAWLGGDDLRRKESLQKNMQKAYRTANFFRVLQENNNETQEEDEEEEKLIIEEEPQRE
IIPQEEVIVEEVEDEIEEEIEAELINEEMRNIFGYEENEITNEVAITKMYEDLEDASDIQ
SETRAEIQKIEQIVKQCGDIYRIPLKKRISMLNPLRILNEKLLKARLIDLCHLRSHYENR
KYEIIMDGDYDKLKTASVIGLTSTAASMNRQLLNRLKSPVYLIEEAAELLECQITSVLHP
NVEHLIMIGDEKQLQPKVNSYYLEKNCDFTVSLFERLIRNGLEYSSLNVQQRMRPEVREL
VDMFYEKLIDHESVKQFENVNGVSKNVCFIEHKKLEKTSDDVQSLTNPHEAEFLCKFSKY
LLNVRQFKASQITILTPYRGQVILIKKTLRELLNQDLYRELRVSTVDDYQGEENEIILLS
LVRSNNFENLGFVKITNRIIVSLSRAKKGLYIIGNHDLLRNNEDWRKVFARLKHSDRILD
HLPLSCPTHSEERECIREPSDFDGVIWGGCKKPCTYRYPCGHICSLPCHHDSLHKERKCE
KICGEKYEDCGHRCEDKCHHGKSCPKCKTKVDYKFVACGHVTKVACHLKNTTQLCKSTCN
KLLGCGHNCRGQCGQCGLTGCGPCIATVKDYCETCKKPYERRCSEPRICTNRCTVKLSCG
HACSGKCGECSTSGTHKVCGFKCERKLICGHICKAKHTCSNPCPKCEEICKFKCFHNIQC
KLACHEMCHKCKEPCPIQCPHRKCTNLCHELCNVEPCNEKCPNICSKCNHQCMGLCGEPC
PPCMYCDTLKKEEEEMWQCPISFYTFEDLIQSDDSRVYHLPECGHTIELESMDNCVKTFF
DTEQGVSIKYLSCPVCRTPIFTSPRYQHSIKQSVERMENLKYVIYKKAEEEKERKQAIKA
VSAGYASGHWFTCPNGHPYFIGDCGGAMQQSTCVDCGEQIGGSNHTLLASNRLATEIDGS
TAPAWPTALNR
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaacaacccactcaaccacctcccaatgataatgatatcaatattctgagatat
ccaacaataacccctactaataataagaaaccacacaaaggtggttttattaaaattcca
atcactccaaactcaaccaatgacacaatcgatccacagaatattaaccagaagaccaac
acttctttatccaccactactatagatgctaatgtgaagcctgtagtattgaataataca
tctcctactgatggaaaaagaaacaagccaaagaagaagaatgatgcgtcatcaaatgca
ttgaatgttggtggtcaatcaagtgctgcatcttcatcattggatgttgttgtacctcca
tcaccatcatccgaagcatctgcatcatcatcatctacattcagtaagaaaggtagagaa
tttaaaccctccgaacatgcaaacaagagattttcacaagtacttttaatgtgtggaaaa
tgtaattcatgtcttgctgccaatactttggaagcctctcacatgtttagtgttttcaaa
gatgatcgtacgagacatgctgttctgaaggatcaaaatgtgattgggaataccttgatt
gagaaggaaaccaatttcaagtttgaaaagaaaaacgaaaagtaccgaaagactcacatg
ttatattgtaaagcatgtaatcaaaaagtgggttctagatttccaggcaattatccagat
actgaattgcctaaaagaatgttcgatggtagtgattgtaaggtttcatgtaaggagttg
aataatgatgatggacaagatgttgtaatgaatgttgaagagtggagaactttgagtagt
tcattgagagattatggattatatcctccacgtcatgtatcttctcaagattcatcgaga
aataattccagagatggttctttcaagaaggatttcaatggaaagaaaccagtagaaagt
gggacgaatgaaaacaaatttcaaaagaaggaatttaacaagaagagttttgaaaagaag
aatcatcaaccaaatgaaccgattacatcaatcccatttataagcaacaatgaggtggat
aatatctttggaagaaacaatcaaggatcgtcatcttcatcaccattcatcagaaacatt
tctccaaaatttggtcaattgtctcaagcaagagttcaaaaagatttgcctccaaaaaag
gaaaagaaagattacacaatcaaaactgttaagggtattggtttttatattgacaattca
cttttcaatgaaaatcaaaaagaatatttcatcaagaacttaacacaagaagaattcaaa
tcaatattcaataagggaggtcttttagaggaacaagaagttaatttttcaattattgaa
aagctcatgaaggtctttgcccatgagcaaatagaattatcaactaacaagtcactaatc
accccaatcttttctcatctcatgaatagcttattttggagaagagttgtaaagaaatat
attgtacaggatgtaattgatgatgaacaagttaaagacttgatcacagtttttcacaga
tgcttggagttttgtccacaggaagctgagagagttttcattgaagaattagaaaaggtg
tacattgacaaattcgtctctcaagattatcaggaatccattatggcaatcaagaaaagg
aagcaagcactcaaattggccaactcaaagatggataaaggaccactacctgaacaacaa
gaaatcaacgaaaatgatgaaaatgaatttgaggaaattagtgtctttccaactttcaat
gaattgacttcgaatgaaagattcaaagttagaaacaatgttgatggcccttattcttct
ttgagagaatatattaggactcaaatattgttattgagagaggattttattcatccactc
aaggatggcattcaatctttcctttccaataattgtaaccatagatcaatttcagttttc
acagattgtcaattcgtgtctgttatttcatcagataatgaacgtgaattagttcattct
ctttcattccattatccttggagaaggatcaattgggaatgtaccaaaaaattagctttc
ggttcccttctctgtttattcccacaagaaggttctggaaagaatgcaaccattgtaaaa
tcagagccaatatttgtaacagttttggatagaaaatcggtctcaaaagaattaatttat
gttggtttgagtagagttgaggatttcaagagactttctctcgttggaaaatatgtcatg
tttgaatcacctgcttatttcgctggagttagacctgtcattgattctctcaatatgatt
ctcaatgaaaccttaattgaccaatccaaatttacattttatgatgaattcatcaaattg
aaacaacaaactccaccacaatatatcgaaagagatagttttatgaatttagatgttatc
aagggagatcaaagaagatcgactcaatcagatttatctactggaagaaaaactaatatt
ttgagtaattggattgaggataatgagactttccttgatcctagtcaaaacaaggccatt
caacacgttatgagaaatagagtttcaattgtaattggacctccaggttgtggaaaaacg
tttacaggaattgagattgctaaattattgaagagtcacccagatatgaaaaatagacaa
ttaatatgtattacttatactaatcatgctcttgatcaatttttagaaggtttaattgat
tatttcccagatattgtcagaattggcagtagaagtaagagtcagaatgagaaactattg
aatagaaacctttctaaaatgagatatttgccacaatatctatatgtagaaaagcaaaag
tgtgaagctgaattgagaaggttgtcactcacaattggtgcaacagaactttctatcaag
aatccagacgatagtttacttcgccacttggcaaaatcatttgtatttaatagagctctc
tcaaaattcccaattcacctgtatagcaagagaaatccacctccagaaaccttacaagcc
atgttcagagcttggttaggaggagacgatctcagaagaaaggagagtttacaaaagaac
atgcaaaaggcctatagaactgctaatttctttagagttctacaagaaaataacaatgaa
acacaagaagaagacgaggaggaggagaagctcattattgaagaggaacctcagagagaa
atcattccacaagaagaagttattgtggaagaagttgaagatgaaatcgaagaagaaatt
gaagccgaattgattaatgaagaaatgagaaatatatttggctatgaagaaaatgaaatc
accaatgaagttgctattactaaaatgtatgaagatttagaggatgcatcagatattcaa
tcagaaactcgagcagaaatccaaaaaatagagcaaatagtcaagcaatgtggggatatt
tacagaattcctctcaagaagagaatttcaatgctcaacccattgagaattttgaatgag
aaactactcaaggcacgtctcattgatttatgtcatcttagaagccactatgagaataga
aaatacgaaattattatggatggagattatgacaaattgaaaactgcctcagttattgga
ttgacttctacagctgcttccatgaatagacaactattgaatagattaaagtcacctgtc
tatctcattgaagaagctgctgaattattggaatgtcaaattacttctgtattgcatcca
aatgttgaacatttaattatgattggtgatgagaaacaacttcaacctaaagtcaactct
tactacttggagaagaattgtgatttcactgtgagtttattcgaaagattgatcagaaat
ggattggaatattcttcactcaatgtccaacaaagaatgagaccagaagttagagaatta
gtcgatatgttctatgagaaactaattgaccatgaaagtgttaaacaattcgaaaatgtt
aatggagtgagtaagaatgtttgctttattgaacacaagaaattagaaaagacctcagat
gatgttcaatcattgaccaatccacatgaagctgagtttttatgcaagttttcaaagtat
cttctcaatgtcagacaattcaaggcaagtcaaattacaattctgacaccttatagagga
caagttattttgattaaaaagacactcagggaattgcttaatcaagacttgtatagagaa
ttgagagtttctactgttgatgattatcaaggagaagaaaatgagattattttactttcg
ttggtgagatcgaataactttgaaaatcttggatttgttaagattaccaacagaattatt
gtttcattgagtagagcaaagaagggtctctacattattggcaatcacgatttgttaaga
aataacgaagattggagaaaggtctttgctagactaaaacattcggatagaattttggat
catttacctctctcctgtccaacacactctgaagaaagagaatgcataagagaaccaagt
gattttgatggtgttatctggggagggtgtaagaaaccatgtacttatcgttatccatgt
ggacacatttgttcattaccgtgccatcatgattcattacataaggaaagaaaatgtgaa
aagatttgtggtgaaaaatatgaagattgtggtcatagatgcgaggacaagtgtcatcat
ggaaaatcctgtccaaaatgtaaaactaaagttgactacaagtttgtggcatgtggacat
gttacaaaagttgcatgccacttgaaaaatactactcaattgtgcaaatcaacgtgtaac
aaacttcttggatgtggacataattgtagaggacaatgtggacaatgtggattaactggt
tgtggaccatgtattgccacagtcaaagattattgtgaaacttgtaagaaaccatatgaa
agaagatgttcagagccaagaatctgtacaaatcgttgtactgtcaaactatcttgtgga
catgcatgttctggaaagtgtggtgaatgctcaaccagtggaactcataaagtttgtgga
ttcaagtgtgagagaaaactcatttgtggacatatttgtaaagctaaacatacttgtagt
aatccgtgtccaaaatgtgaggaaatttgtaaattcaaatgtttccataatattcaatgc
aagcttgcttgccatgaaatgtgtcacaagtgtaaggagccatgtccaattcaatgccca
cacagaaaatgtacaaatctttgtcatgagttgtgtaatgtggagccatgcaatgagaag
tgtccaaacatctgttcaaaatgtaatcatcaatgtatgggactttgtggagagccatgt
ccaccatgtatgtattgcgatactctgaagaaagaggaggaagaaatgtggcaatgccca
atctctttttacacatttgaagatttaattcaaagcgacgattcgagggtttatcattta
cctgaatgtggacacaccattgaacttgaatcaatggataattgtgtgaaaaccttcttt
gatacggaacaaggagtttcaatcaaatacttgtcatgtccagtgtgtagaactccaata
tttacttctccaagatatcaacactctatcaagcaatctgttgaaagaatggaaaatctc
aaatatgtaatttacaaaaaggcagaggaggaaaaagaaagaaagcaagctattaaggct
gtctctgctggctatgcttctggtcattggttcacttgtccaaatggtcatccatatttc
attggtgattgtggaggagccatgcaacagagtacttgtgttgattgtggagaacaaatt
ggaggttctaatcatacactattggcttctaatcgtttagcaactgagattgatggttcc
acagccccagcttggccaactgctcttaatagataa
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