Naegleria gruberi: NAEGRDRAFT_81004
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Entry
NAEGRDRAFT_81004 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
ngr
Naegleria gruberi
Pathway
ngr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
NAEGRDRAFT_81004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngr04131
]
NAEGRDRAFT_81004
Membrane trafficking [BR:
ngr04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
NAEGRDRAFT_81004
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WDR55
WD40_Prp19
Beta-prop_HPS5
zf_RING_Vps8
Beta-prop_WDR90_POC16_2nd
CDC45
Motif
Other DBs
NCBI-GeneID:
8854408
NCBI-ProteinID:
XP_002673261
JGI:
Naegr1_81004
LinkDB
All DBs
AA seq
1110 aa
AA seq
DB search
MSKNKNLLEEDDDSLDQGESSSGSGDEMEEKKNKLKKQPESEEEEDDDDEDDDDEEDEDD
DEEDDDDEDDDEDDDDEESEEEEEYEPQLKYQRLAGSLPKDIFGIEGNYASALVVGEKFL
ALGTHLGYLYILDFEGNNNQQQKFRPHAETINDLTIDSTGEYIASCSNDGKVVVYNIYSA
LYANMQNPTVHKKILDPNSDANTVITGNSMLTNVASSISGGSGNAQEGNLMEFFFNRPMK
SVALDPLYSTRSDKSVISGGKTGKLTMKRKGWFSYKELVIHKDEGEIHAVRWFGDFIAWA
NDFGVKVYDIVSNQKITYISRSSSAPRPDMYRPCLTWCQPDRFTVDNKQSDNKDSKSLAQ
LLIGWGQSVTLIVIKERRNAKEQKSQRYVEVLAMFEVEFYISGIVPYSNEDSLLILAYDE
DEERDEDNANEKPKKKLVAPRPELRIMDLKGEEKSCDALSIKNFESYFATDYRLEAYTSS
VATPYRNEQEEVYYILSPRDIVAARPRDDDDHVKWLMQKNRYLDAIKYCEANQSKLKDIS
MLDIGKKYLRYLLENKQYKEAAQMVPNVAGVDENLWEEWIYSFIDLKQFHVIIPFIPISK
PKLKDAIYEMKLNYFLLNSPDLFLKCIKEWPQDLYNIQNITTVTSERILVLEQEAKIATL
EGKEQESREATRKISLLQESLANLFMYEKHYDRALDIYFKLKRSDVFEFIQTHSLFSSVQ
DKILDLISFDEDRALRLCVEHHENIMVEQIIKQLKNERVQLLKYLDGLFYHNVQNFNRDR
YHIIQVELYAEFDSKRLVWFLEQSQSYKIEQALKICEQHLNKPVLKFFEYLYKRDTVPVS
EKTGRNEDQDDLMDDDESSYTIATEFVQYEKKKNINTNDDDASLEERNKQLYKGIVYLLG
RMGNTNEALALIIDKLEDVTLAIEFVEKQPDSELYQNLLNKSLKKPKFISGLMDHISEHG
SDYIDPSALVRKIPEQMDIEGLKKKLTRLITDFSQQKTLQEGCQEILQADLKQQSAQLFK
QQRKGVKVRIGGRCALCGQRLTMTKEDNIMFMSGFYYHYRCYSEVVDVGANNKDQESDSE
GTSTSNPSESHKKLYCVITHSREKKNTRRR
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaacaagaatttgctggaggaggatgatgattcactcgatcagggagaatct
agtagtggaagtggtgatgaaatggaggaaaagaaaaataaattaaaaaagcaacccgaa
agtgaagaggaagaggacgatgatgatgaagacgatgacgatgaagaagatgaggacgac
gacgaggaagatgatgatgatgaggatgatgatgaagacgatgatgatgaggaaagtgaa
gaagaggaagaatacgaaccacaattaaaatatcagagactggctggtagtttgccaaaa
gatattttcggtatcgaaggaaattatgccagtgccctcgtggttggtgaaaagtttctt
gctttgggaactcacttgggatacttgtacattttggattttgaaggaaataacaatcaa
caacaaaaattcagaccacacgcagaaacaatcaacgatcttacaatagatagtactggt
gaatatattgcaagttgcagtaatgatggtaaagtggtagtgtacaatatttattctgcc
ctttatgccaatatgcaaaatcctacagttcataaaaagatcctcgatcctaattccgat
gctaatacagtcataacaggaaatagtatgctaacaaatgtagcctcttctatttcagga
gggtctggaaatgcacaggaaggtaatttaatggaatttttcttcaatagaccaatgaaa
tctgttgctttggatccattatattctacaaggagtgacaagtctgtaattagtggtgga
aaaactggaaaattaacaatgaaaaggaagggttggttttcatacaaggaattagtaata
cacaaagatgaaggagaaattcatgctgtgagatggtttggagattttattgcttgggcc
aatgattttggtgtcaaggtttatgatattgtttctaatcagaaaattacatatatttca
cgttcttcatcagcacctagaccagacatgtacagaccttgtctgacttggtgtcaacca
gataggtttacagttgataacaaacaatctgacaataaggattccaagagcttggctcaa
cttttaattggttggggtcagagtgtaactttaattgtaatcaaggaaagaagaaatgca
aaggaacaaaaatctcaaagatatgtggaagttttggcaatgtttgaggtcgagttttac
atttctggtattgttccatactcaaatgaagacagtcttctcatattggcatatgatgaa
gatgaagaaagagatgaggacaatgctaatgagaagccaaagaagaaattggttgctcca
agaccagaattgagaattatggacttgaaaggtgaagaaaaatcatgtgatgctctctct
atcaagaatttcgaaagttactttgctactgactatagattagaagcatacacttcttct
gttgcaactccataccgaaatgagcaagaagaagtgtactatatcctttctccaagagat
attgttgctgctcgtccaagagatgatgacgatcacgtcaaatggctcatgcaaaagaac
agataccttgatgctatcaagtattgtgaggctaatcaatccaaactcaaggatatttcc
atgttagatattggcaaaaagtatttgagatacctgttggaaaacaagcaatacaaagaa
gcagctcaaatggtcccgaatgtggctggtgttgatgagaatttgtgggaggaatggatt
tattccttcattgatttgaaacaattccatgttattattccattcattcctattagcaaa
ccaaagttgaaggatgctatttatgaaatgaaattgaattacttcctccttaactctcct
gacctcttcctcaagtgtatcaaagaatggccacaagatttgtataatattcaaaatatt
acaactgtaacctctgaaagaattttggttctcgaacaagaagccaaaattgccactcta
gaaggaaaagaacaagaatccagagaagccaccagaaagatatccctcttacaagagtct
ttggcaaacttgttcatgtatgaaaagcactatgacagagctcttgatatttactttaag
cttaaaagatcagacgttttcgagtttattcaaacccactcacttttttcctccgtgcaa
gataaaatattggacctgataagttttgatgaagatagagctttgagattgtgtgttgaa
catcatgaaaatatcatggtcgagcaaatcatcaaacaactgaagaatgaaagagttcaa
ctcttgaaatacttggatggcttattttaccataatgtacagaatttcaatcgtgacaga
taccacattattcaagttgagttgtatgcagaatttgactcaaagagacttgtttggttc
ttggaacaaagtcaatcctacaagattgaacaagctctcaagatttgtgaacaacattta
aataagccagtactcaagtttttcgaatacttgtacaagagagatactgtacctgtatca
gaaaaaactggcagaaacgaagatcaagatgacttgatggacgatgatgaatcgagctat
actattgccaccgagtttgttcaatacgaaaagaagaagaatattaataccaatgatgat
gatgcctctctagaagaaagaaacaaacaattgtacaaaggaatcgtttatttattagga
agaatgggtaacaccaacgaagccctggcattgattattgacaagcttgaagatgttact
ttagctattgaatttgttgaaaaacaaccagatagcgaattgtaccaaaatttactcaat
aagagtttaaaaaagccaaaattcatttctggacttatggatcacatttctgagcatggt
tcggattatattgacccatctgctctcgtaagaaagattccagagcaaatggacattgaa
ggactcaagaagaagttaacaagactcattactgatttttcacaacagaaaacacttcaa
gaaggttgtcaggaaattctccaagccgatcttaaacaacaaagtgctcaattattcaaa
caacaaagaaagggtgtcaaagttagaattggtggcagatgtgctctctgtgggcaaagg
cttacaatgacaaaggaggacaatatcatgtttatgagtggtttttactatcattacaga
tgctactctgaagtggttgatgttggtgccaataataaggatcaagaatctgacagtgaa
ggtacatctactagtaatccatctgaatcccataagaaattgtactgtgtcattacacat
tctagagaaaagaaaaacacaaggagaaggtag
DBGET
integrated database retrieval system
