Naegleria gruberi: NAEGRDRAFT_81118
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Entry
NAEGRDRAFT_81118 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ngr
Naegleria gruberi
Pathway
ngr03440
Homologous recombination
ngr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NAEGRDRAFT_81118
03460 Fanconi anemia pathway
NAEGRDRAFT_81118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngr03032
]
NAEGRDRAFT_81118
03400 DNA repair and recombination proteins [BR:
ngr03400
]
NAEGRDRAFT_81118
Enzymes [BR:
ngr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NAEGRDRAFT_81118
DNA replication proteins [BR:
ngr03032
]
Eukaryotic type
DNA Topoisomerases
NAEGRDRAFT_81118
DNA repair and recombination proteins [BR:
ngr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
NAEGRDRAFT_81118
FA (Fanconi anemia) pathway
NAEGRDRAFT_81118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF
Zn_ribbon_TOP3B
Motif
Other DBs
NCBI-GeneID:
8854209
NCBI-ProteinID:
XP_002672722
JGI:
Naegr1_81118
UniProt:
D2VSX3
LinkDB
All DBs
AA seq
1015 aa
AA seq
DB search
MSSRYQNAGGGGNYNNRQGPHQKVLCVAEKPEAAKQIATILSAGKFQRREGKSKFNKIFE
FEYRMNGVVVTMSVTSVLGHLMELGFDPKLKSWTSCDPITLMDPATPVFRNVPEKNLEIQ
QNLEQEARYATKLLLWLDCDREGENIAFEVIEVCKKVNRSLSIENDSILRARFSEFTAAA
INRAIRNLERPNVLDSMAVDTRQELDLRIGASFTRFQSLRLKKKFQGITADYISYGPCQF
PTLGFVVKRDLIIKNFESESFWTLNCTHDMGEEGKAQFLWKRGRLFDQLTCLVIYELCVE
AQRARVVNVEKKRRYKYRPDPLNTIELQKLASQKLKMGSHETMKVAESLYNKGFISYPRT
ETNNYNQFQDDDLKRLVNEHTSNPTWGGYASDLLNGGYQKPPSGKQDDKAHPPIHPLKGD
CNSNDSKEQALYELIARHFLACCSKDAVGAETKVIISIANEEFTCSGLMVEQKNFLEIWK
YDRWSDKSIPVFNAGQEFIPTSLLMDHGETRPPPHLSESDLISAMDSNGIGTDATVAQHI
KTIQERGYVIKKGNRFEATNLGMALLQGYDLIGYELSTPNLRSKMEKDMLSISKGEQSKE
AVIHQSLSMYKHVYIQICKSAYLLDKAVQQHFPTLGEGQSRVLGRGFSLCSCKNPMDLKE
QDGNNFLHCKNCSDSYPLPSKSEYESIEDVCPICNFQILNIITQKNTSYKLCPHCFNNPP
EIENSNESFANGFKCFNCTFTGCKYSRKKDAVVRKCQKCSNNLVVRQRKNDTSLYIGCKG
FPNCKSAVWLPKSIEKADLTTEKCNRCSTRSDTVYRLKFTFAQGTLLPPGVNREHTTCVF
CDQDFDEAFNINLNSLNGDSGGASSHGVLVHNSTSNNRNMPNRSPTIAGGGYGNRTSPVG
ATGRNIAARQNNTPPPNQMTLDRMLGKRTRVDNNNGNNNSNPPPQNSYQRNNTSPRNQFG
NNHGGSGSGDVVCTNCSSAPEIFTCKQGENQGRQFYKCPNKDKDEACKKFFKWVD
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcacgttatcaaaatgctggtggaggaggtaattacaataatagacaaggacca
caccagaaagtgttatgtgtagctgaaaaaccagaggctgccaaacaaattgccacaatt
ttaagtgcaggaaaatttcagaggagagaaggaaaatccaagtttaacaagatatttgaa
tttgaatatagaatgaatggtgttgttgtaacaatgtcagtcacatcggttttaggtcat
ttgatggagttgggttttgatccgaaattaaaatcgtggacatcttgtgatccgattact
ttgatggatcctgcaacacctgtatttcggaatgtgccagagaagaatttagaaattcaa
caaaacctagaacaagaagcaagatatgccacaaaattattgctgtggctcgattgtgat
agagaaggagaaaatattgcatttgaagtgattgaagtttgcaagaaggtaaatcgaagc
ctttccattgaaaatgattcaattctcagggcaagattttcagagtttacagctgcagca
atcaatagggcaattagaaatttggaaagaccaaatgtattggatagtatggctgtagat
acgagacaggaattggatttgagaattggagcctcttttactcgttttcagtcactcaga
ctcaaaaagaagtttcaaggaattacagcagattatattagttatggaccatgccaattt
ccaacattgggatttgtggtaaagagagatttaattatcaagaactttgaatcggaatca
ttttggactttaaattgtacacacgatatgggagaggaaggcaaggctcaatttctatgg
aagagaggtaggctttttgaccaattgacttgcttggtcatttacgagttgtgtgttgaa
gctcaaagggctagagtggtcaatgtggaaaaaaaaagaagatacaaatacagaccagat
ccattgaatacaattgaattgcaaaaattggcatctcagaaattgaaaatgggttcacac
gaaactatgaaggttgctgaatcattgtataataagggttttatcagttatcctagaaca
gaaactaacaattacaatcaattccaggatgatgatttgaaacgacttgtaaatgaacac
acatcaaatccaacatggggtggttatgcttcagatctattgaatggaggttatcaaaag
ccacctagtggaaagcaagatgataaggcgcatcctccaattcaccctctcaaaggtgat
tgtaattccaatgattcaaaggaacaagctctctatgaattgattgcaagacacttttta
gcatgttgttcaaaggatgctgtcggtgccgagactaaggttatcatttcaattgccaac
gaagagtttacttgctctggattgatggttgaacaaaagaactttttggaaatttggaag
tatgatagatggtcggataagagtattccagttttcaatgcaggtcaagagtttatccca
acctcattattgatggatcatggtgaaactcgtccacctcctcatctttctgaatcagat
ttgatttctgctatggattctaatggtatcggtactgatgccactgttgctcaacacatt
aaaaccatccaggagagaggctatgtcatcaagaaaggaaatagatttgaagccaccaac
ttgggaatggcactcttgcaaggatatgatctcattggatacgaattatcaactcctaat
ttgagatcaaagatggaaaaggatatgcttagtatttcaaaaggagaacaatccaaggaa
gcagtcattcaccaaagcttgtccatgtacaaacatgtatatattcaaatttgtaaatca
gcttatttattggataaggcggtacaacaacattttccaactcttggtgaaggacagagc
agagttttaggaagaggattttcactatgttcctgtaagaatccaatggacttgaaggag
caggatggaaataatttccttcattgtaaaaattgtagtgattcatatcctcttccttct
aaatcagaatatgaaagtattgaagatgtttgcccaatttgtaatttccagatacttaac
attatcacacaaaagaacacttcatacaagctgtgtcctcactgtttcaataatccccca
gaaattgaaaattcaaatgaatcttttgctaatggattcaaatgctttaactgtacattt
actggttgtaaatattcgagaaagaaggatgccgtagtaaggaaatgtcagaaatgttcc
aacaatttagtagtaaggcaacgaaagaatgatacctccctttatattggatgtaagggg
ttcccaaattgtaaatctgcagtgtggcttccaaagtcaatcgaaaaggctgatttgaca
actgaaaagtgcaacaggtgtagtactcgttcggatactgtgtatagattgaaatttaca
tttgcccaaggaacacttctacctccaggtgttaatagagaacatacaacttgtgtattt
tgtgatcaggactttgatgaggctttcaatattaatttgaattcccttaatggtgattca
ggtggtgcttcttcccatggagtgcttgtacacaactctacatcgaataatagaaacatg
ccaaatagaagtccaacaattgctggtggtggttatggaaatagaacaagtccagttggg
gcaacagggagaaatattgctgcaagacagaataatacaccaccacctaatcaaatgact
ttggatagaatgttgggcaagagaacaagagttgataataataatggaaataataatagc
aacccacctcctcaaaattcttaccaaagaaacaatacatctccaagaaatcaattcgga
aacaatcatggcggtagtggatctggtgatgttgtatgtacaaattgtagctctgcacca
gaaattttcacttgtaagcagggagaaaaccaagggagacaattttacaaatgtccaaat
aaggataaggacgaggcttgtaaaaagtttttcaaatgggttgattaa
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integrated database retrieval system
