Naegleria gruberi: NAEGRDRAFT_81215
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Entry
NAEGRDRAFT_81215 CDS
T01241
Name
(RefSeq) mRNA decapping protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
ngr
Naegleria gruberi
Pathway
ngr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NAEGRDRAFT_81215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngr03019
]
NAEGRDRAFT_81215
Messenger RNA biogenesis [BR:
ngr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
NAEGRDRAFT_81215
mRNA degradation factors
5'-3' decay
Decapping complex
NAEGRDRAFT_81215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
8854279
NCBI-ProteinID:
XP_002672484
JGI:
Naegr1_81215
UniProt:
D2VTY8
LinkDB
All DBs
AA seq
346 aa
AA seq
DB search
MTTNNQSMAMYSSATQQQDTNGQQQQDGKNGANYNTNRLNARQQMNIGVLKRKDKFITTI
HSTFDHVVFYKFQDDSWDKLEVEGAMFIVERNEPKFPKYRIVVMNRKSSDDFRQDITKDL
ELEVHHPYVFYRTKGRIIKGIWFYKSLQCIEFNDLIVSLKEKAYGKTEPESKQSNTFVQP
PTTLQPSPLINYHPNHADSIYHPSSQSHQINHHQNDSQPSSDASSLLKNMLGIGGVTGLP
PVENGSFNPSSAMDGNNYLDEESLIREHFFNSSANQQVSTVVEPEYSSVLSQECVQQFGK
RKFVTKEMFINQLMFTLESNKDFSDACYNQYCQFLADENKQSGNRC
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaataaccaatcgatggcaatgtattcctctgctactcagcaacaggataca
aatggccaacaacaacaagatggtaaaaacggtgcaaattataatacaaaccgattaaac
gctagacaacagatgaatattggagttttaaagagaaaagataaatttattacgacaata
cactcgacctttgatcatgtagtattttacaagtttcaagatgattcatgggataaattg
gaagtagaaggagccatgtttattgtagagagaaacgaaccaaaatttcccaagtatcgt
attgtagtgatgaatagaaagagtagtgatgattttcgtcaagatattacaaaggattta
gaattggaagtccatcacccatatgtattctatagaaccaaaggtcgtattatcaaggga
atttggttctacaaatctttgcaatgtattgaatttaatgacctcatcgtttcgttgaaa
gaaaaggcctatggaaagacggaaccagaaagcaaacaatcaaatacttttgtacaacca
ccaactactttgcaaccatctcctctaattaattaccatccaaaccatgctgattcaatt
tatcatccatcatcacaatcccatcaaattaatcatcatcaaaacgattcacaaccatca
tcagatgcttcatctttacttaagaatatgctaggaattggaggtgtaacaggattacca
ccagttgaaaatggttcctttaatccatcatctgcaatggacggaaataattatctagat
gaagaatcacttatcagagaacactttttcaactctagtgccaatcaacaagtttctact
gtggttgaaccagaatattcatctgtgttatctcaagagtgtgttcaacaattcggaaag
aggaagtttgtcactaaggaaatgttcatcaatcagctcatgttcacactagaatctaac
aaggacttttccgatgcttgctacaatcaatattgccaatttctagctgatgaaaataaa
caatcaggaaataggtgctag
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