Naegleria gruberi: NAEGRDRAFT_81916
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Entry
NAEGRDRAFT_81916 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
ngr
Naegleria gruberi
Pathway
ngr04142
Lysosome biogenesis
ngr04145
Phagocytosis
ngr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
NAEGRDRAFT_81916
04142 Lysosome biogenesis
NAEGRDRAFT_81916
04148 Efferocytosis
NAEGRDRAFT_81916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngr04131
]
NAEGRDRAFT_81916
Membrane trafficking [BR:
ngr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
NAEGRDRAFT_81916
Hops complex
NAEGRDRAFT_81916
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS18_solenoid_2nd
VPS11_C
zf-C3H2C3
Beta-prop_Vps41
zf_RING_Vps8_fungal
DUF6831
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
8857318
NCBI-ProteinID:
XP_002670195
JGI:
Naegr1_81916
UniProt:
D2W0C8
LinkDB
All DBs
AA seq
1074 aa
AA seq
DB search
MWKKFNFFDKHTVSDEKSSKFFSQTNVTCCTSGRSNIIFGDNRGTFHVMDKNLNTRQCKA
FEARVNHIKHIAKSNCLVVVGDDGGEAYQDVLKIYSLDKYKEHTKEGHTSFGQYQLVRDI
KIFSQIKDMEPYPVCCFEANQDFNCIALGLGNGKIIIFEGDFTKQGGKSSHKVFLLDGAP
NERITGLGFKRYGNSPNDYTLFCCSLTQVFKYSINTNSSTSQRALEQSKVILDDTIGCEV
GCSTLSNDGDFVVSSKSAVWFFKPEGKGSCFAFEGKKILSHWFRNYLIVISSDINTTSSK
SQQVITIYDLKNKYIAFRYSSDKLHITHILQEWGNVFLLSNIDENKSEQQMFLLEEKDTQ
SKLELLLQKNFYSIAISLVDSEQLDSNYLFEISKQYGDHLYSKKDYDGAMKQFCRTIGRL
EPSYVIRKFLDANRIRNLTEYLETLHEKRLATSDHTTLLLNCYTKLKDERKEKLDKFISM
QDKLMYDVETAIRVCRKAGYKEHALILAMKHKQHDWYIKIHLEDFDTDNLDKDNGEKVDS
KENFRRALKYIESLALPEAESYLKTYGKTLISHLPKETTNALIRLCTEYFPIHPAETNRV
LDSDIKLTQKRIIDNYKLRIIPNSNDSSNQAEKKKEGGILNVLLGLKQSSANLESQIVKT
TGYEDMYNNQHIEHAKPKPESYIHCFPSKDQYWLMIFLENVIWRTLRPDTSHSKVVYNTL
IELYLKYLDTDSKKRPELEQTQGISDRYEIQPPSTDIANLSFKDRLLYTLDHPQSNYDKE
HVLVLVQSQNFKEGVLKIYDTLGLHYYIIQYYMEQRDYKNVIASVNQYGDKDPNLWVQVL
TYFATLDDNVEEELAIVLEKIEKDEILPPLLVVQILGKNEKTKLYSVKDYLISKIQKEQE
MIREDVEKIKEFQTETAQMRKEIYDLQTSAKTFQATTCTFCNAQLDLPAVHFMCNHSYHQ
RCLLVGNEGECRVCSDKHRDILQRKRKFEESSEQHESFFKQLNTKKLDGYSLVCEYFGRG
IGTVFTKAKLLADIEEVSIPAIADEDEEEDEDDVSNFTSDDEDDDIDRRRRLLE
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagaaattcaacttctttgacaagcatacagtgagtgatgagaaatcatcaaaa
tttttctctcagaccaatgtaacttgttgtactagcggaagaagtaatattatattcgga
gataatcgtggtacttttcatgttatggataaaaatttaaatacacgtcaatgtaaagcc
tttgaagcaagagttaatcacatcaaacatattgctaaatctaattgtttagttgttgtt
ggtgatgatggtggagaagcctatcaggatgtattgaaaatttattctcttgacaagtat
aaagaacacacaaaggaaggtcacacaagttttggtcaatatcaattagtaagagatatc
aagatatttagtcagatcaaagatatggaaccttatccggtgtgttgttttgaagcaaat
caagattttaattgtattgcacttggtttaggaaatggtaaaattattatatttgaaggt
gattttacaaaacaaggaggaaagtcatcacacaaagtgtttttattggatggtgctcca
aatgagagaataacaggattaggatttaagagatatggtaattcacctaatgattatact
ttattctgttgttcacttactcaagtttttaaatattctattaatactaatagcagtaca
tcacaaagagcacttgaacaatcaaaagtaattttagatgacactattggatgtgaagtt
ggatgtagtactttgagtaatgatggagattttgtggtttcttctaaatctgctgtttgg
ttctttaaacctgaaggaaaaggatcttgttttgcttttgaaggtaaaaagatcttgtca
cattggttcagaaattatttaattgttattagttcagatattaacacaaccagtagcaaa
tctcaacaagttattactatttatgatttgaaaaacaagtatattgcctttagatattcg
agtgacaaattacacattacacatattcttcaagaatggggtaatgtctttttattgtcg
aatattgatgaaaacaaatctgaacaacaaatgttccttttggaagaaaaagatacccaa
tccaagttggaattgcttttacaaaagaacttttattcgattgccatcagtttagttgat
agtgaacaacttgacagtaattacttgtttgaaatttcaaaacaatatggtgatcacttg
tattcaaagaaagattatgatggagctatgaaacaattttgtagaactattggtagattg
gaaccatcctatgttatcagaaaattcttggatgcaaacagaattcgtaaccttacagaa
tatcttgaaacccttcacgaaaaacgtcttgccacctctgatcacacaaccctcttgtta
aactgttacaccaaattgaaggatgaaagaaaggaaaaactcgacaagtttatcagtatg
caagataagcttatgtacgatgtagagacagctattagagtttgtagaaaagccggctac
aaggaacatgccctcattttggccatgaaacacaaacaacacgattggtacattaagatt
cacttggaggactttgatacagataatttggacaaggataatggcgagaaggttgattct
aaagagaactttagaagagcgctcaaatatattgaatctcttgccttacctgaagctgaa
agttatctgaaaacctatggtaaaacactcatttcacatttaccaaaagagactactaac
gctctcataagattgtgtacagaatatttcccaattcaccctgctgaaacaaatagagtt
ttggatagtgatatcaagttaactcaaaagagaatcattgataattacaagcttagaatt
ataccaaactccaatgattcaagcaaccaagcagaaaagaagaaagaagggggtattctg
aatgtacttctaggtttgaaacaatcatctgctaatcttgaatctcaaattgttaaaact
accggatatgaagatatgtataataatcaacacattgaacatgctaaaccaaaaccagag
tcatatattcattgcttcccaagtaaggatcaatactggttaatgatatttttggaaaat
gttatttggagaactcttcgaccagatacatcacattccaaggttgtgtacaatacgctc
attgaactttatcttaaatatttggatactgattctaagaaaagaccagaacttgagcaa
actcaaggcatttctgatagatatgaaattcagccaccaagcacagatattgccaatttg
agctttaaagatagattgctttatacactcgaccatccacaatctaactatgataaggag
cacgttcttgttcttgtccaatcacaaaactttaaagaaggtgtactcaagatttatgat
actttgggtcttcactattatattatccaatattatatggagcaacgtgattacaagaat
gtaatcgcctctgttaatcaatatggtgacaaggatccaaatttgtgggttcaagttctc
acatattttgccacattggatgataatgttgaagaagaattagctattgtattagaaaag
attgaaaaggatgaaattttacctccattactggttgttcaaattcttggtaagaatgaa
aagaccaaactctattctgtaaaggactatctgatttctaaaattcaaaaagaacaagaa
atgataagagaagatgtagaaaagatcaaggaattccaaactgaaactgctcaaatgaga
aaggaaatttacgatttacaaaccagtgccaaaactttccaagctaccacttgtactttc
tgtaatgctcaattggacttgcctgctgtacatttcatgtgtaatcactcataccatcaa
agatgtctccttgttggtaatgaaggtgaatgtagagtttgttctgataagcacagagat
attctccaaagaaagagaaaattcgaagagtcgagtgaacaacacgaatccttctttaag
caacttaataccaagaagttggatggttattctctggtttgtgaatattttggacgtggt
attggtacagttttcactaaagctaaattattggcagatattgaggaagtgtcaatacca
gcaatagctgatgaggatgaagaggaagatgaggatgatgttagcaattttacaagtgat
gatgaggatgatgatatcgatagaagaagaagacttttagaataa
DBGET
integrated database retrieval system
