Naegleria gruberi: NAEGRDRAFT_82093
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Entry
NAEGRDRAFT_82093 CDS
T01241
Name
(RefSeq) DEAD/DEAH box helicase
KO
K10841
DNA excision repair protein ERCC-6
Organism
ngr
Naegleria gruberi
Pathway
ngr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NAEGRDRAFT_82093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngr03036
]
NAEGRDRAFT_82093
03400 DNA repair and recombination proteins [BR:
ngr03400
]
NAEGRDRAFT_82093
Chromosome and associated proteins [BR:
ngr03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
NAEGRDRAFT_82093
DNA repair and recombination proteins [BR:
ngr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
NAEGRDRAFT_82093
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Mu-like_Pro
Desmo_N
Motif
Other DBs
NCBI-GeneID:
8856152
NCBI-ProteinID:
XP_002669658
JGI:
Naegr1_82093
LinkDB
All DBs
AA seq
1029 aa
AA seq
DB search
MLRSRSAVASSSSSSSGRNSTTNEHEQQEQHENTSLRSVGPSEDDLSMLGVSAFRTEDIE
KNVMDEVNKQIEENQKVLEKKEHSRIDKLNAKIEKYEKELKELNKRSSLSSSDEKKIKSL
KKKIATLLDKKDEMIEELEDRREIRESLNVIDNDNNESERERLIRTGIITPFDNMPSNEA
NDIFNCLNQKIKKEDEDDEDYVDDEENQEDDEEEEEEEEEKVPMKKEFKEDDSNDEYYKK
RLEEFYETREVTKRFIISDEGEEMEVTKVNYGPSIQIAGSYSIPKEIYDKLFGYQKTTLK
WMCELNRQGVGGILGDEMGLGKTVQITTFLAGLHFSGLFEPSIIIAPATVMKQWQEEINT
WWPELRVVIMHTSQGTKANFESLIEKVSSCPNGVLITTYESLRIYQDVLTSKKWGYIILD
EGHKIRNPDAALTLACKRFETPHRIILTGTPIQNNLKELWSLFDFCYPGKLGTLPVFLTQ
FSIPITQGGYSNATKFQVQTAYKCSCVLRDLIKPYLLRRMKKDVKHQLPEKKENVIFCKL
TDKQVKIYDEYLKSREVTGTLDGEHLLFKAITNLRKVCNHPDLICTEKKPDDFGAVEKSG
KMMVVEKLLSLWKEQNHRVLLFSQSKKMLDVFEPFLQERDYTYSRMDGDTPVKERSVLIN
QFNSDDKIFVFLLTTKVGGLGVNLIGANRIILFDPDWNPSTDLQALERAWRLGQTKQVTV
YRLMTSGTIEEKMYHRQIFKQFLSNKVLKDPRQKRFFKSNDLYELFTLGKEYDSVRRKNG
NKSIPYDDDEENTETGNLFSNSEILRQDMPTIKKKKKDVEYRVEKFKGSEDDSKKDETYI
LQCLFDEKSVKSIFNHDSVVNTTSSETSILEKQAKQIAEIAVKELKKSGELRKSMPLSVP
TFTGQNGLGGLRVSALGSSSGTNPKGGLASSVLLANIRKKQDIMSDQPRSVNNVNDLADE
LKPVYKSSNKMVDNIVSFFQKRGKATTDEVRKHFSYITGDDVIYFKELLQKIARFSKSKK
IWTLRENKE
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcagtcgttctgctgtagcttcctcttcatcatcatcttcaggaagaaattca
acaacaaatgaacacgaacaacaagaacaacatgaaaatacatcacttcggtcggttgga
ccatccgaagacgatttatcaatgttgggagtgtctgccttcagaaccgaagacattgaa
aagaatgttatggatgaagtgaataaacaaattgaagaaaatcaaaaagtattagaaaaa
aaggaacacagcagaattgataaattaaatgcaaaaatcgaaaagtatgaaaaggaatta
aaagagttgaataaacgatcatcactttcgagtagtgatgaaaagaaaataaagagtttg
aagaagaaaattgcaactctcttggataagaaagacgaaatgatcgaagaattggaagat
agaagagaaattagagaatcattaaatgtaattgataatgataataatgaatcggaaaga
gaaagattaattagaacaggtatcattactccgtttgataatatgccttctaatgaagcc
aatgatattttcaattgcctaaaccagaaaatcaagaaggaggacgaagatgatgaagat
tatgtagatgatgaggaaaatcaagaggatgacgaggaagaagaggaagaagaggaagaa
aaagtaccaatgaaaaaggaatttaaagaggacgattcgaatgatgaatactataaaaag
agattggaggaattttatgaaacaagagaagtgactaaaaggtttataatcagtgatgaa
ggcgaagaaatggaagttactaaagtgaattatggaccaagtatacaaattgcaggatct
tactcaatccctaaagagatttatgacaagttatttggatatcaaaagactactcttaag
tggatgtgcgaattgaatagacaaggagttggaggaatactgggagatgaaatgggattg
ggaaagactgtacaaattaccactttccttgctggacttcactttagtggattattcgaa
ccttctatcattattgcacctgcaactgtaatgaagcaatggcaagaagaaattaataca
tggtggccagagcttagagttgtgattatgcacacatctcaaggaactaaagccaatttc
gagtcactcatagagaaggtttccagctgccctaatggtgttcttatcacaacatatgaa
tctttaagaatttatcaagacgtgcttacttctaaaaagtggggatatattatcttggac
gagggtcacaagattagaaatcctgatgctgccttaacattagcatgtaaaagatttgaa
acaccacacagaattattttgacaggtacaccaattcaaaacaatttgaaagagctttgg
tcactatttgatttttgttatcctggaaagctcggaactcttccagtatttctcacccaa
ttttcaattcctatcacacagggtggttattcgaatgcaaccaaatttcaagtacaaaca
gcttacaaatgttcatgtgtactgagagatttaatcaagccatatcttttaagaagaatg
aagaaagatgtaaagcatcaattacctgaaaagaaggaaaatgtaattttttgtaaattg
acagacaaacaagttaagatatatgatgaatatttgaagagtagagaagttactggaacc
cttgatggagaacatttacttttcaaagccattactaatctcagaaaagtttgtaatcat
cctgatttgatatgtactgagaagaaacctgatgattttggtgcagtagaaaagtcaggt
aaaatgatggttgtagaaaagctattgagtctttggaaggaacaaaatcatagagtatta
ctcttttctcaaagtaagaaaatgttagatgtatttgaaccatttttacaagaacgagac
tatacctattctagaatggatggcgacactcctgtaaaggagagaagcgtactgattaat
caattcaatagtgatgacaaaatctttgtgtttttactaacaacaaaggtaggaggattg
ggtgtgaatttaattggtgcaaatagaattattttattcgatcctgactggaatccatcc
acagatcttcaagctctcgaaagagcatggagattgggtcaaactaaacaagttactgtt
tacagattgatgacaagtggtactattgaagagaagatgtatcatagacaaattttcaaa
caatttctttcgaataaggttctcaaggatcctagacaaaagagatttttcaagtccaat
gatctttatgagttatttactcttggtaaagaatatgactctgtgagaagaaagaatggc
aacaaatctattccttatgacgatgatgaagagaatacagagactggtaatttgttctcg
aatagtgaaattttaaggcaagacatgccaacaattaagaagaagaagaaagatgtggaa
tatcgtgtagaaaaattcaagggctcagaagatgactcaaaaaaggatgagacttatatt
ttgcaatgcttatttgacgaaaagtctgttaaaagtattttcaatcatgactctgttgtg
aatactaccagttctgaaacatcaattttggaaaaacaagcaaaacaaatagctgaaatt
gctgttaaggaattaaaaaaatcaggagaattaagaaaaagcatgcctttatctgtacca
actttcacaggacaaaatggattaggagggctcagggtatctgctttgggaagtagtagt
ggtaccaatccaaaaggtggattagcatcgtctgtacttttggcaaacattagaaagaaa
caagatattatgagcgatcaacctagatctgtaaataatgtaaatgatttggctgatgaa
ctcaaaccagtttacaaaagttcaaacaaaatggtggataacattgtttcctttttccaa
aaacgtggaaaagccacaactgatgaagtaagaaagcattttagttatattacaggagat
gatgtcatttactttaaagaacttttacaaaagattgcaagattcagtaaatccaagaaa
atttggactttgcgagaaaataaagaataa
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integrated database retrieval system
