Naegleria gruberi: NAEGRDRAFT_82293
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Entry
NAEGRDRAFT_82293 CDS
T01241
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ngr
Naegleria gruberi
Pathway
ngr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
NAEGRDRAFT_82293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_82293
Enzymes [BR:
ngr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NAEGRDRAFT_82293
Spliceosome [BR:
ngr03041
]
Complex A
U2 snRNP components
U2 related factors
NAEGRDRAFT_82293
Complex B
NAEGRDRAFT_82293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
MCR_alpha
Motif
Other DBs
NCBI-GeneID:
8860510
NCBI-ProteinID:
XP_002668937
JGI:
Naegr1_82293
UniProt:
D2W436
LinkDB
All DBs
AA seq
898 aa
AA seq
DB search
MSNHQQRDSYHSSHHHNDHRGYRREGSSNYSSEGSRHPSSFNNNNFGPPSSSYRSSRNDD
HQYRYNDNNRQYNRSDDRSNNLKRSYDDYKQETNKTSESSNNTNPQLNTTATTTTTSSNN
TKPTTTTTTTSDTTNTTTTTSDENEKKKARLEAWKKKKEMGALQKLEEEKKQKVPVPPPK
PVKKPLSFGTKKTVNNNIKISVLNMDDDEEETTTKQTNSLSFLEEEENVNTNMSDDEDDD
LEKYMSSIHSELKQSEKPKEIDNGTLSNENTDLNSSEIRNQKGQVLFSDDTDDVDLDSYF
IAKDDITNRNLEGLSEFQKQSKKDLKQVDHSKMEYLPFRKNFFIVPREYANMSENDIAEL
RKEMGNIKVHGHDIPPPVKTWTQCGLNDTILGVLETHGYTKPFAIQSQALPCIMSGRNII
GIAKTGSGKTLAFVLPMLRHVLDQPPLKTVDGPIGIVMAPTRELAMQIHSDIEKFSAPLM
LKTACVYGGAGIAEQIALLKNGAHIIVCTPGRLIDLLCANRGRVTNLTRDLVSAGYRENV
CTLDGSMEQIERDCTISDFKSQKFNIMVGTSVCSRGLDVPSIRLVVNYNCPDHYEDYIHK
VGRTGRAGKKGVAYTFISTDEEKYAPDLVKALKQSNNPVPEDLQKLCDNYLTKRNLGLVQ
GQKKNALPGFVGTGYKFDEKEEKQKMEEKKQMAFSYALTNNDDTILDQIDIQEVDETKKK
DKSQKKKSKKEETVVDRATKAADAVYKDIEKDDTITEEEKAIQRAQLFAAALTVHTSISE
KQKEKELSQMILAGVVNINGLFRTEVEINDWPRGPRSEVLKKDSLHSIQHFTNTKIQIKG
TYIPPETKPQKGERKQYLIVEGADEGSVHQARTQILSVLGESASALGDKRVTGRFQIV
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccaccaacaacgagatagttatcactcatcacatcaccacaacgatcataga
ggctatagacgagagggatcttcaaattattctagtgagggaagtagacatccatcatcc
tttaataataacaatttcggcccaccttcttcatcatatcgttcatcccgaaatgatgat
catcaataccgctataacgataacaacaggcagtacaatagatcagatgatagaagtaat
aatttaaaaagatcatatgatgattataaacaagaaacaaacaagacttcagagtcatca
aacaatacaaaccctcaactaaatacaacagctactaccaccaccacttcatctaataat
acaaaaccaactacaacaacaacaacaacatccgatactaccaatacaacaacaacaaca
agtgatgaaaatgaaaagaaaaaggctagactcgaagcttggaaaaagaagaaagaaatg
ggagctcttcaaaaattggaggaagaaaagaaacaaaaagttcctgttccaccaccaaag
ccagtgaagaaacctctctcttttggaactaaaaaaactgtaaataataacatcaaaata
agtgttcttaatatggacgatgatgaagaagaaacaacaacaaaacaaactaattcgttg
agttttttggaagaagaagagaatgtaaatactaacatgtctgatgatgaagatgatgat
cttgaaaaatacatgtcaagtattcacagtgaattaaaacaatcagagaaaccaaaagaa
attgataacggtacgttaagtaatgaaaataccgacctgaattcttctgaaattagaaat
caaaaaggacaagttttattctctgatgacactgatgatgtcgatttagatagttacttt
attgcaaaagatgatattaccaatagaaatttggagggattatctgaattccaaaagcaa
tcaaagaaagatttaaaacaagttgatcattcaaaaatggaatatctaccatttagaaag
aatttcttcatagttcctcgtgaatatgctaatatgagtgaaaatgatattgcagaactt
cgtaaggaaatgggtaatatcaaagtacacggtcatgatattcctcctccagttaaaaca
tggactcaatgcggtttgaatgatactatattgggagtattggaaacacatggttatact
aaaccatttgctattcaatcacaggcattgccatgtattatgagtggaagaaatattatt
ggtatcgctaaaacaggtagtggaaaaacattagcatttgttttaccaatgttgagacat
gttttagatcaacctccactcaaaactgtagatggtccaataggaattgtgatggctcca
acaagagaattggctatgcaaattcattcagatattgaaaaattctcagcaccactcatg
cttaaaacagcttgtgtttatggaggagctggtattgctgaacaaattgcattattgaag
aatggtgctcacattattgtgtgcactccaggaagactcattgacttgttgtgcgccaat
agaggtagagtaacaaatttaactcgagatttagtatcagcaggttacagagaaaatgtt
tgtactctggatggtagtatggaacaaatagaaagagattgcactatttctgattttaaa
tcacaaaagtttaatattatggttggtaccagtgtttgttcaagaggtttagatgttcca
agtattagacttgttgttaactataattgtccagatcactacgaagattatattcacaaa
gtaggtagaacaggcagagctggaaagaaaggagttgcctatacctttatttctactgat
gaagagaaatatgctcctgatttggttaaagctctcaaacaatctaataatcctgtacct
gaagatttacaaaaactttgtgataattatcttacaaagaggaatttaggtctagtacaa
ggtcaaaagaagaatgcacttcctggttttgtaggtacaggttacaaatttgatgaaaag
gaggaaaaacaaaagatggaagaaaagaaacagatggcattctcttatgctcttactaat
aacgatgatactatactggatcaaattgatattcaagaagttgatgagaccaaaaagaag
gataaatctcaaaagaaaaaatcaaagaaagaagaaactgttgttgatagagcaactaag
gctgctgatgctgtttataaggatattgaaaaggatgatactattacagaagaagagaag
gcaattcaaagagctcaactctttgctgctgccctcactgtacatacatcaatatctgaa
aaacaaaaagaaaaagagctttctcaaatgattttggctggagttgtaaatatcaatggt
cttttccgaactgaagttgaaattaatgattggccaagaggacctcgttctgaagttctc
aaaaaggatagccttcatagtatccaacatttcaccaacacaaagattcaaattaaaggc
acttacattccacctgaaacaaaaccacagaaaggagaaagaaagcaatatttgattgta
gaaggtgctgatgaaggatcagttcatcaagccagaactcagatattgagtgttctagga
gaaagtgcttcggcattaggagacaaacgagttacaggaagattccaaattgtatag
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