Naegleria gruberi: NAEGRDRAFT_83091
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Entry
NAEGRDRAFT_83091 CDS
T01241
Name
(RefSeq) DEAD/DEAH box helicase family protein
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ngr
Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:
ngr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngr03041
]
NAEGRDRAFT_83091
03009 Ribosome biogenesis [BR:
ngr03009
]
NAEGRDRAFT_83091
Enzymes [BR:
ngr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NAEGRDRAFT_83091
Spliceosome [BR:
ngr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
NAEGRDRAFT_83091
Ribosome biogenesis [BR:
ngr03009
]
Eukaryotic type
90S particles
Helicases
NAEGRDRAFT_83091
Pre-60S particles
NAEGRDRAFT_83091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
P-loop_SecA
Cas3-like_C_2
Chordopox_A30L
Motif
Other DBs
NCBI-GeneID:
8850493
NCBI-ProteinID:
XP_002678515
JGI:
Naegr1_83091
UniProt:
D2VBC1
LinkDB
All DBs
AA seq
478 aa
AA seq
DB search
MTPIQARSIPIALAGKDLLAQAKTGSGKTLAFLLPCLELLYRAEFKPRNGTGVIILSPTR
ELAIQTYAVCKSLMTFMKQTHCLLIGGQSKHQEGEKLVKGCNIVIATPGRLLDHLLHTKG
FVYSNLISLVLDEADRMLDDGFEEELKAIVKLLPTKGRQTLLFSATQTTKVADIARVSIK
RDPVFVGIEDLNKITKTEETEEYSTATNLEQGYVVVPASEKFVLLYSFLKKTMATTPGKK
GKKIIVFFSSCAAVKYYSELLNYINVSVTPLHGKMKQNKRTQAFMNFCGAESGVLLSTDV
AARGLDIPKVDWIVQYDPPEAPKEYIHRVGRTARAGNVGRALLFLLPSETGFLKYLSESN
IPLNELDFPRTKMSNIQDQLEKIISSNYYLFKNAEEAFKGFIKSYASHPLKDIFSFQLLD
VAGITKSFGLKNTPYVDLKSLEVGASSAIEKKRKSDNKWIKSGVSQKKKEDKKKRKTE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacacctatccaagctcgttctattccaattgctttggcaggtaaggatttacttgct
caagctaaaactggtagtggtaaaacattggcattccttttgccatgtttagagttatta
tacagagctgaatttaaacctagaaatggtacaggagttattattttgagtccaactaga
gaattggctattcaaacctatgctgtttgtaaatcattaatgacatttatgaaacaaact
cattgtttgttgattggtggtcaatctaaacatcaagaaggagaaaaacttgttaagggt
tgtaatattgtcattgccactccaggtagattgttggatcacttacttcacacaaaagga
tttgtttattctaatttgatttcacttgttttggatgaagctgatagaatgttggatgat
ggttttgaggaagaattgaaagctattgttaaattattaccaactaaaggaagacaaact
ctcttattcagtgccactcaaacaacaaaggtcgctgatattgccagagttagtattaaa
agagatccagtttttgttggaattgaagatttgaataagattaccaagactgaagaaact
gaagaatattcaactgctacaaatttggaacaaggatatgttgttgttccagcaagtgaa
aaatttgttctcctctattcattccttaaaaagacaatggcaacaactcctggaaagaag
ggaaagaagattatcgtctttttcagtagttgtgctgctgttaaatattattcagaatta
ttgaactatattaacgtttcagtgacacctctccatggtaaaatgaagcaaaataagaga
acacaagcatttatgaacttttgtggtgctgaaagtggtgtgttactttccactgatgtt
gctgctagaggtttggatattccaaaggttgactggattgttcaatatgatccaccagaa
gctccaaaagaatatattcaccgtgttggtcgtactgctcgtgctggaaatgttggacgt
gctttgctcttcctccttccatctgaaacaggatttttgaaatatttgagtgaatcaaac
attccattgaatgaattggatttccctcgaacaaagatgtcaaatattcaagatcaactc
gaaaagattatttcttccaattactatttattcaagaatgctgaagaagcattcaaaggt
tttatcaaatcgtatgcttcacatccattgaaggatattttctcattccaattattagat
gttgctggtattaccaaatcatttggtctcaagaatactccatatgtggatttgaagagt
ttagaagttggtgcttcaagtgccattgaaaagaagagaaagagcgacaataagtggatt
aagagtggtgtttctcaaaagaagaaggaagataaaaagaagagaaagactgaataa
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