KEGG   Naegleria gruberi: NAEGRDRAFT_88233
Entry
NAEGRDRAFT_88233  CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
ngr  Naegleria gruberi
Pathway
ngr03020  RNA polymerase
ngr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NAEGRDRAFT_88233
  09124 Replication and repair
   03420 Nucleotide excision repair
    NAEGRDRAFT_88233
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ngr03021]
    NAEGRDRAFT_88233
   03400 DNA repair and recombination proteins [BR:ngr03400]
    NAEGRDRAFT_88233
Transcription machinery [BR:ngr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     NAEGRDRAFT_88233
  RNA polymerase III system
   RNA polymerase III
     NAEGRDRAFT_88233
  RNA polymerase I system
   RNA polymerase I
     NAEGRDRAFT_88233
DNA repair and recombination proteins [BR:ngr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      NAEGRDRAFT_88233
SSDB
Motif
Pfam: RNA_pol_N Chordopox_RPO7
Other DBs
NCBI-GeneID: 8851175
NCBI-ProteinID: XP_002674313
JGI: Naegr1_88233
UniProt: D2VNX8
LinkDB
AA seq 74 aa
MIIPVRCFTCGKVIGNKWDKYLQLLNSEALNTLGLKRYCCRRMLLTHVELIEKLLLYNTT
DKDEEQEDQATYNA
NT seq 225 nt   +upstreamnt  +downstreamnt
atgatcatccctgttcgttgttttacttgtggtaaagttattggtaataaatgggacaag
tacctccaacttttgaattccgaagctttaaatacattaggcttgaagagatattgttgt
agaagaatgttgcttacccacgtcgaacttattgaaaaattattgttatataatactact
gataaggatgaagaacaagaagatcaagcaacatacaacgcttaa

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