KEGG   Naegleria gruberi: NAEGRDRAFT_980
Entry
NAEGRDRAFT_980    CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K12816  pre-mRNA-processing factor 17
Organism
ngr  Naegleria gruberi
Pathway
ngr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    NAEGRDRAFT_980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ngr03041]
    NAEGRDRAFT_980
Spliceosome [BR:ngr03041]
 Complex C
  Other components
   Step II factors
    NAEGRDRAFT_980
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_NWD2_C NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR75_2nd VPS8_N Fibre_HD
Other DBs
NCBI-GeneID: 8859393
NCBI-ProteinID: XP_002679020
JGI: Naegr1_980
UniProt: D2VAB0
LinkDB
AA seq 544 aa
LVFNPKYDELYAPKVGPKNPFATSDTKFDSGFMLNGEINSHNMNTYLFNSQYYNYDVSRQ
GNLLPGGSAERPNSSSIHVGSSANKNKKRKQDQLASYSSSTSNNKNEKYIELNESEDAEI
ISAFGEDAFIEDETAEEQHENMINEIKSQHEEQMARRKEQIKALKDQQSEEQDKKKKKED
FGKLPEIAFNEETEKKTSTEGKDGYSIYHLSTDVDYQGRSFISPPSHLKPCEYTEKKSVL
PKKCIHTYRGHQDGKMVTSIEFFPEYGHLLLSGSMDCTVKIWDVLGNRDCVRTYVGHTKA
VRASSFSHDGAQFASCAYDKRVNIWDTETGNILQTFTSGSTPYCVKWSPLEGRQHEVIVG
YSNNRIVQWDTRSGKIVRKYDRHTGSVNSLCFLDGGKKFVSSSDDKSIRLWEYGVPTEVK
KIADPEQHPMPFLEAHPNGKWMIAQSLDNQILTFDAQSRLKQQQNKIFKGHQIAGYSCQA
GFSNDGKFVFSGDYTGNVWFWDWKEAKQIKKMQCHEGIVIGSIWHPLDRSLFATCGSDST
IKLF
NT seq 1632 nt   +upstreamnt  +downstreamnt
cttgtatttaatccaaagtatgatgaattatatgcacctaaagtaggacctaaaaatcca
tttgccacaagtgatacaaaatttgattcgggattcatgttgaatggcgagattaattca
cataatatgaatacttatttatttaatagtcaatattataattacgatgtttcaagacaa
ggtaatttattacctggaggaagtgctgaaagacctaattcatcatcaattcatgttgga
tcatcagcaaataaaaataagaagaggaaacaagatcaactggcatcatattcatcatca
acaagtaataataagaatgaaaaatacattgaattgaacgagagtgaagatgcggaaatt
atttctgcttttggtgaggatgcattcatagaggatgaaacagctgaggaacaacatgaa
aatatgattaatgaaatcaagtctcaacacgaggaacaaatggctagaagaaaggaacaa
attaaagcccttaaagatcaacaatctgaagaacaggataaaaagaaaaagaaggaagat
tttggaaaattacctgaaattgcattcaatgaggaaactgaaaagaaaacatcaactgaa
ggaaaggatggatacagtatttaccacttgtcaactgatgtggattatcaaggaagatca
ttcatttcacctccatctcatctcaaaccatgtgaatatactgagaagaaatcagttctt
ccaaagaagtgtattcatacctatcgtggacatcaagatggtaaaatggtcacctccatt
gaattttttccagaatatggtcatctcttattgagcggttctatggattgtacagtaaag
atttgggatgttctaggcaatagggattgtgtgagaacctacgtaggtcacaccaaagct
gtcagagcatcatcattctcccacgatggagctcaatttgcttcatgtgcctatgataag
agagttaatatttgggataccgaaactggtaacatacttcaaactttcacctctggttcg
acaccatactgtgtcaagtggagtcctctcgaaggcagacaacatgaagttattgtaggg
tattcgaataatagaattgtacaatgggatactaggtcaggaaagattgttcgtaaatat
gatagacatacaggttcagtgaattctttgtgtttccttgatggtggtaaaaagtttgtt
tctagcagtgatgataaatcaataagattatgggaatatggtgtaccaactgaggttaag
aaaattgcagatccagaacaacatccaatgccattcttggaagctcatccaaatggaaag
tggatgattgctcaatctcttgataatcaaattttgacatttgacgctcaatcaagattg
aaacaacaacaaaataagatattcaagggacatcaaattgctggttattcatgtcaagct
ggtttttcaaatgatggaaagtttgttttcagtggagattacacaggaaatgtttggttt
tgggattggaaagaggcaaaacaaatcaaaaagatgcaatgtcatgaaggaattgtcatt
ggtagtatttggcatccactcgatcgatctctatttgcaacctgtggtagtgatagtact
attaaactcttc

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