Neoarius graeffei (lesser salmon catfish): 132864324
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Entry
132864324 CDS
T10798
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03440
Homologous recombination
ngra03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132864324 (brca2)
03460 Fanconi anemia pathway
132864324 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132864324 (brca2)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132864324 (brca2)
03400 DNA repair and recombination proteins [BR:
ngra03400
]
132864324 (brca2)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
132864324 (brca2)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
132864324 (brca2)
DNA repair and recombination proteins [BR:
ngra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
132864324 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
132864324 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
YlqD
Motif
Other DBs
NCBI-GeneID:
132864324
NCBI-ProteinID:
XP_060753688
LinkDB
All DBs
Position
17:50986006..51060548
Genome browser
AA seq
2637 aa
AA seq
DB search
MFDDFFHQIETELGPLNSDWFEELTVRASEDERDNSTVEHDATAHQDKGVFRAPAKTPVL
DSQMCSTPRIFRRRRPHSPASGPEESPYSGIRNLFPVPPGAESSPCLFGLAPDSRQFEKD
WGSRKTSACLDLLDTPTGLKAQATSAQRISESLGAQLNPDLSWSSSFNTPSALTPTVILP
KREDQASPVSFLRDKEVIIVRNLFPSLSKGTESTSANTSSAQHADALTERNVQAEGQKSD
SSSDSTEGVWRQSVPDAIKDGDVRNTVKSVLNDADDVLSFFFTTSGSALRRVKTKERKKR
ANGVSKDIKSHPLPVDHTTECTSASAASLRSPLFSSQVIINNNNNNNNKDFTQWTPLSLS
DVKDPKTNQVCISEISSKLTNPRADLSDDHKNHVTQHGWSSSCTSDQQKVSLDACCDATQ
GRSSLLEASPALTFSRKPRKFVYRVQNSESKRIHNGTDTAAGKHLQESSQDAQTDAGDLI
QLAETKQDHPASLNMDHDLDMTQLCKAFAEDFTQELNVLKSHYKSAPNSRERVLTPTCTT
IEIGETESVMQCEGHVDHQAAEAINLTNIQSHEVTVCDSGYPTVHSGSGFSLETPSCSST
GHLHSGFKTANNKIIVIPPEALMKAKAALDESLEDETLTGTSSVTEPINQYKSCKPVLAG
ERIPSESSHHGTEPSESVLRSEAAAENIPNTFMRQTSESGFRTASNKSITVSSANLEKAK
DIFVELDEEKFDSRLSNNELQVHKGKDAKMFKFDVKSSRKPSQRSSGHDDGSSSLTASQR
ADVTELCSMFEEAGSQYEFTQFNHAKIGSKCPDSMQSEREWDPEILAGIDFDDSFNCDLT
ERQMSKKLQSKADVNASVPNRLTNGDVAIQSVNIRKPCHIPCEMPNPSDDALQDKPFCSG
FKTANGNAVTISEKHLNKARSLFADIEDTEGNFGPESDRKADTVKQTEKQSRDHKDKSCM
ESELGLKPGLNVCHGNASAITKGADMCSKANLQTLQGTIDQKPDLVQSNMVNFGFSTAGG
KEVNISEKALQNAKKLLNDKETKYENSPAKTKAASRASGRNSSNVLADVLHDSKTSDGSV
PKGGKVEYFENGSDIKQTMCPASTSRSVETNGFKMASGKGVSVSASAIQKSKTIFDDLDD
SPRSSDETNSKEENTKLCLEGDTGQHMFVNGFKMASGKGVSFSVKALMKAKTVFKNRDPD
RADVSQVKGDDTSVMDDCGFEAVAGNMVHLPGMDSLNKEALKKDSTDLNKCVQRKFSQGS
TETLQPPSGCGFRTASGAAVTVSIEALEQARAIRDDPSASPSGERRLEISEENRISKNET
LISAKTCGFSTASGRKVAISEKALQKASSLFTDCDVDGLGPDPCNLSAVETSSTSPEHVG
LPFSASSSKTIATSKKELNQGKDVFVSCGNISLDTQSTESHLAVQTRHRESYSTKNDRMS
AYAGRYEIITNGGSKADDLGSGNVGFSTASGKSVCVSKSALEVAFEMFRDCDAQADTNGQ
CRTTNEAPFTNLTKPPVAPKTRSTRPSPRSQSTQDNPSLLSRHSLNLDGCTVTQQQYFEQ
EAMACTKALLEDDLNKNGLLTSLDTGIRQSPTQCPDRCLEVNAGIRKRTSGDQSLTGQPP
LKRRLVSEFNQISEDRAACAPVKSSPCGTLRDRRIFKYNLKPNITYPSRNIVDQTSANPD
HLKRKPSDPKAPVFIPPFRKNLQPGTPKDRVPTAVAQVSGVFVPPIKKKDASGSVYVKDS
PQISGESPTIASSGCENGRNHSARKPEEQRAATETKREENLENHTTVSCETKVIWQQSLE
LAQDMQNMRIRKKKRQRVRPLPGTFYLAKTSGVNRVSLKDAVGYKCPELHAEQQLYQHGV
SFKVSQITSENAESFQFSCDEFFKCEVLREAGGVQLADGGWLIPDNRGMLGKEEFYRALC
DTPGVDPKLISEAWVYNHYRWIVWKRASMERAFPQFMGGRCLTPEQVLLQLKLRYDVEVD
HSRRSALKMITERDDTPAKTIVLCMCGIAKCDESPVRSEEAMNTADTKPESPAAVIWLTD
GWYSIQALLDFPLSTMLRKGRLRAGVKLLIHGAELIGSQDACPPLEAPDSLMLKISANST
RRARWDTKLGFYKDPRPFPLFLSSLYANGGVVSCVDIIVLRSYPTQWMEKKPDSVFVFRN
ERAEDREAARYNSTKQKTMELLFSKIQAQIEKEEEEKKKTRRSMTFSLREIKNLQEGEEL
HEAIESDPTFVEAHLSTQQVKAVSSYRRALTERKRAELQDRVHKAVQEAEGGCANRDVTP
VWKLSISDSNELHSRRVYTLNIWRPSVELRSLLREGCRYKAYHLATSETKKRSGTSNIQF
TATKKTQFQNIEVCPEWLSLHFPARESTKFIDLQSPGFSSPCGEVDVVGYVITILDRQGT
SPVLYFVDEKFDFVSVRIYSSLALLALEDLVKPLALLAVSNLQLRQQSGPVPSLYAGEQA
LFSTSPKEPHLQEDLSRLKTFVEDYEHFFIVAEEKLSNLIPTGFLNPCESLRTPGLPSVP
KPNIRNNVTPHQTSRVFSPFTPVTKGTPVPAGNSDSKDPRSVKRKRGMEYLSRLQKPAPL
VPLGMVRSPRVSKTFNPPRRCETPRNLQTMPTPPPEEKQWVKDEELAMINTQTLLKR
NT seq
7914 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgacttcttccatcagattgaaacagaactcgggccgctaaactcggactgg
tttgaggagttgactgtgcgagcgtctgaagatgaacgtgataactccactgttgaacat
gatgccacggcacatcaggacaaaggcgttttcagagctccagctaagacgccagtcctg
gacagtcagatgtgttcaacacccagaatatttaggcggaggcggccacattctcctgca
tcaggtcctgaagagtctccctattcaggaatccggaacctgtttcctgttcctccaggt
gcagaatcgagcccatgcctgtttggcttggctccagacagccggcagtttgaaaaagac
tggggatcacgaaagacaagtgcatgcttagatctacttgacacaccaacaggtttaaaa
gcacaagccacgtctgcacagcgcatctctgagagccttggagctcagttaaatcctgat
ctctcctggagcagctcctttaacacaccatcagcactgacccccacagttattttgccc
aaaagagaagaccaggcttcaccagtaagttttctcagagacaaagaagtcattattgta
cgaaatctgtttccatcgctctcaaaaggcacagaatcaacatccgcaaatacatccagt
gcgcaacacgctgacgcgctaacagaaaggaacgtccaggccgaaggacaaaaatcagat
tcatcgtctgacagtaccgaaggtgtttggaggcagtcggtaccggatgcgataaaggac
ggtgatgtgcggaacacagtgaagagtgttcttaatgatgctgatgatgtgctgtccttc
ttctttacaaccagtggctccgccctgcgaagggttaaaaccaaggaaagaaaaaagaga
gcgaacggtgtttctaaggacatcaagtcacatcctttgccagtagatcacactactgag
tgtacatcagcatctgctgcaagtttaaggtcccctttgttttcaagtcaggttattatt
aataataataataataataataataaggatttcacacaatggactccgctgagtttatct
gatgtcaaagatcccaagacaaaccaagtgtgcatctctgaaatctcaagtaaactcact
aatcctcgtgcagacttatcagatgatcataaaaaccacgtcacgcagcatggatggtct
tcttcatgcacgtctgatcaacagaaggtctctctcgatgcgtgttgtgatgcaactcag
ggacggagttctttattggaggcatctccagcacttaccttctcaagaaaacccaggaag
tttgtgtatcgagtgcagaattcagaaagtaaaagaatacacaatggcactgacactgcg
gctggaaaacacctccaggaatcttctcaggatgcgcagacagacgctggagatttgatc
cagcttgcagagactaagcaggatcatcctgcaagtcttaacatggaccatgaccttgat
atgactcagctttgcaaagcatttgcagaggatttcactcaggaactgaacgtgttgaaa
tcgcattacaaaagtgcaccgaacagtcgtgagcgtgtcttaacgccaacgtgcacgaca
atagaaataggcgaaacagaatccgtgatgcagtgtgaaggtcatgttgaccatcaggca
gcagaagccatcaatttgaccaatatacaatctcacgaggtcacagtgtgcgacagtggc
tatcctacggttcactcaggttctggttttagcctggaaacgccatcgtgtagtagcacc
ggacatcttcattctggttttaaaacagcaaataataagattattgtaatacctcctgaa
gctttaatgaaagccaaagcagcattagatgaatccttagaggatgagactctcacaggc
acttcaagtgtaactgaaccaataaaccagtataaatcttgcaaacctgttctagctgga
gagagaatcccttcagaaagctctcatcacggaacagaaccttctgaaagtgttttaagg
tctgaagcagctgcagagaacattcctaacacgttcatgcgccaaacaagtgaatctggc
ttcagaacagcatcgaacaaaagtattactgtctcctctgcgaatctcgagaaagctaaa
gacattttcgtggagttggacgaagagaagttcgattcacgtctgtcaaataacgagttg
caggtccacaaaggaaaagatgccaagatgtttaaatttgacgtgaaaagcagtcggaaa
ccttcacaacgttccagtggtcatgatgacgggagttcgtctttgacagcttctcaaagg
gcggatgtgaccgagctgtgcagtatgttcgaagaggcgggcagtcagtatgagtttaca
cagtttaatcacgccaagatcggctcaaaatgtccagacagcatgcagtctgagagagaa
tgggatcctgagatccttgctggtattgactttgatgatagttttaactgtgatctaact
gagaggcagatgtcaaaaaaacttcagtccaaggcagatgttaacgcttcagtcccaaac
aggctgacgaatggagatgtcgctattcaaagtgtaaatattagaaagccatgccatata
ccgtgtgaaatgccaaatccgtccgatgacgctctacaagataagccgttttgctccggt
tttaaaaccgcaaacggaaatgccgtgaccatctccgagaaacatctgaacaaagcaaga
agcctttttgcagatatagaggacaccgaaggaaactttggtcctgagagtgaccgcaaa
gcagatactgttaaacaaacggaaaaacagtcacgtgaccacaaggacaagtcttgcatg
gaatcagagcttggactaaagccagggttaaacgtgtgtcacggaaatgcaagcgcaata
acaaaaggagctgacatgtgtagcaaagcaaatcttcaaacactacaaggaaccatagat
cagaagccagatttagttcagagcaacatggtcaattttgggtttagtactgctggaggg
aaggaagtaaatatttctgaaaaagctcttcaaaacgcaaagaagcttctaaatgacaaa
gaaaccaagtatgaaaattcccctgcaaaaacaaaagccgcgtctcgggcttcaggacgt
aattcttctaacgtgttggcagacgtacttcacgattcaaagacgtctgatggatccgta
ccaaaaggtggaaaagtagagtattttgaaaacggctctgacataaaacagacgatgtgt
ccggcttcgacttctcgatccgtggagaccaacgggtttaaaatggctagcggcaaagga
gtgtctgtttcagcaagcgcaattcagaaatcaaaaaccattttcgatgatcttgatgac
agcccgagaagctcggatgaaacgaattcaaaagaagagaacacaaaactatgtcttgaa
ggcgatacaggccagcacatgtttgtcaacggtttcaagatggcaagcggtaaaggagtg
agcttttctgtaaaagcgcttatgaaagctaagacggtttttaaaaaccgtgatcctgat
cgcgcggacgtttctcaagtaaaaggagacgacacaagtgtgatggatgactgtggcttc
gaggcagttgcgggaaacatggtgcatttgccgggaatggacagtctgaacaaagaggct
ttaaagaaagactccacagatttgaataaatgtgtccaaaggaaattcagtcaaggctcc
actgagactcttcaaccaccatctggctgtggtttcaggacagcaagtggtgctgcggtg
actgtttcaatcgaagctcttgagcaagcgagagctatccgagatgatccgagtgcctct
ccgtctggtgaaaggagattggaaatatcagaagagaatcgtatttccaaaaacgagact
cttatttcagcaaaaacctgtggctttagcactgcaagtggaaggaaagttgccatttct
gagaaagccctccagaaagcaagcagtctctttactgactgtgatgtggacggattggga
cccgatccctgtaatttgtcagctgtagagacttcatcaacaagtcctgagcatgtagga
ttacctttcagtgcttctagtagcaaaactatcgctacgtcaaagaaggagctgaaccag
ggtaaagatgtatttgtcagctgtggcaacatttcactcgacacacagagcaccgagagc
cacttagccgtgcaaaccaggcatcgtgaaagctatagtacgaagaacgatcgcatgtcg
gcttatgctggaagatatgagatcattacgaatggaggctcaaaggccgatgacttggga
tcaggaaacgttggttttagcacagccagcggaaaaagtgtttgtgtgtcgaagtcggcc
ctcgaggtagcttttgagatgttcagagattgtgatgcccaggcagatactaacggacag
tgtagaactaccaacgaagctccgtttacaaatctcaccaaaccaccagttgcgccaaag
accagatccactcgtccatctccccgatcgcagtccacccaggataatccttcccttctg
agccgccattctttaaatcttgacggatgcactgtaacccagcaacaatattttgagcaa
gaagcaatggcttgcacgaaagcacttttagaggatgatctcaataagaatggtttgttg
actagcttggacactggtattaggcaaagtcctactcagtgtccggacagatgcttagag
gtaaatgcaggaatacggaaacggacttcaggcgaccagagtttgacaggtcaaccccct
ttgaaaagaagacttgtgtccgagtttaaccagatctccgaagacagagcagcctgtgcg
ccggtgaaaagcagcccctgtgggactctgagagaccgaagaatcttcaaatacaacttg
aagcccaatatcacttatccatccaggaatattgtggaccaaacctcagccaacccagat
cacctaaaaaggaaaccatcagaccccaaggctccagtgtttatacccccgtttcgaaaa
aatcttcagcctggtacgccaaaagaccgtgttcccacagctgtggcccaagtttctggt
gtgtttgttccacccattaaaaagaaagatgcgtcaggtagtgtttatgtgaaggattcg
ccacaaatttctggtgagtccccaaccatcgcaagctctggttgtgaaaacggcaggaat
cactcagccaggaaaccagaagagcagagagcagcgaccgaaaccaagagagaggagaac
ttggagaaccacaccactgtatcttgcgaaacgaaagttatttggcagcagtccttggag
ttagcacaagacatgcagaacatgagaatcagaaaaaagaagcgtcagagagttcgacct
ctccctggcactttctacctggccaagacgtccggggtgaacagagtttccctgaaagac
gctgtaggatacaagtgtcctgagctacacgcagaacaacagctctatcagcatggtgta
tccttcaaagtgtcccagatcaccagcgagaatgccgagtcgttccagttcagctgtgat
gagtttttcaaatgtgaggttctccgagaggctggaggagttcagctggctgatggcggg
tggctgattccagataacaggggaatgctgggtaaagaggagttctacagagccttgtgt
gatacccctggtgtcgaccccaagctgataagtgaagcgtgggtgtataaccactatcgg
tggatcgtatggaaacgagcctccatggaacgagcctttccacagttcatgggtggtcgg
tgtcttactccagagcaggtgctcctgcagctcaaactcagatatgatgttgaggtggac
cacagtcgaagatcagccctgaagatgattacggaaagagacgacacacccgccaagacc
atagtgctttgcatgtgtggaattgccaaatgtgacgagagtccggtccggtcagaggag
gccatgaacaccgcagatacaaagcctgagtctcctgctgcagtcatatggcttactgac
ggctggtattccattcaagcactgctggactttcctctgtctaccatgctgcgaaagggc
cgtctcagagcgggcgtgaaacttctgatccacggcgcagaattgatcggctctcaggat
gcctgtcctcctctagaggctcctgattcactcatgctcaagatttcagccaacagtaca
agacgagcacgctgggacaccaagcttggcttctacaaagacccgcgaccctttccacta
ttcctttcatcactgtatgctaatggaggagtggtgagctgtgtggacatcatcgtgctg
cggagttacccaacacagtggatggagaaaaagccagattcagtctttgtgtttcgcaac
gagcgagctgaagacagagaggcagcgcgctacaacagcaccaaacaaaagaccatggag
ctcctgttctcaaaaatacaagcccagattgagaaagaggaagaagaaaagaagaaaacc
aggagaagcatgacatttagtctccgtgagattaagaacctgcaggaaggagaggagctt
catgaagcaatagagagtgatccaacatttgtagaggcccatttaagcacacagcaggtg
aaagctgtgagtagctacagacgagctctaaccgaaaggaagagggcggagttacaggac
cgggtgcacaaggctgtacaggaggctgagggaggctgcgctaacagagacgtgactcct
gtttggaaactctccatctctgactctaatgagttgcacagcagacgtgtgtacacactg
aatatctggcgcccttctgtggagttgcgctccttactgagagagggctgcagatacaag
gcttatcatctggccacttcagaaaccaagaaacgctctggcacttccaacatccagttc
acagccaccaagaaaacacagtttcagaacattgaggtttgcccagaatggttgagtcta
cattttcctgcgagagagtcaacaaaattcatagatcttcagagccctggattcagctct
ccatgtggagaggtcgacgttgtgggatatgtaatcaccatcttggacagacaaggtacg
tctcctgtgttgtactttgtggatgaaaagtttgactttgtctccgtgaggatctacagc
agcctggctcttctcgctctggaggacctggtaaagccattagctctactggctgtaagc
aacctgcagctccgccagcagtctggcccagtccccagcctttatgctggagaacaagcg
ctattctcgacaagccctaaagaaccccatttacaggaagatctttctcgtctgaagacg
tttgttgaggattatgagcatttcttcatagttgccgaagagaaactctcaaacctgatt
ccaacaggtttcttgaacccttgcgagtccctgagaactccaggtttgccatccgtgcca
aaaccaaacatcaggaataatgtaacacctcatcagacaagccgagttttttcccctttc
acgccagtgaccaaaggaacccctgtacccgctggaaactccgactccaaggacccgagg
agtgtaaaaaggaagcgtggtatggagtacctgtcacgcctccaaaaaccagcacccctc
gttcctctgggaatggtccgttctcccagagtcagcaagacgtttaaccctcccaggagg
tgcgagacgcctcgtaatctccagacaatgccaactccaccaccagaagagaagcagtgg
gtgaaggatgaagaactggccatgataaacacacaaacactgctaaagaggtag
DBGET
integrated database retrieval system
