Neoarius graeffei (lesser salmon catfish): 132864453
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Entry
132864453 CDS
T10798
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132864453 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngra03021
]
132864453 (gtf2b)
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
132864453 (gtf2b)
Prokaryotic type
Archaeal type
TFB
132864453 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
RB_B
BRF2-like_C_cyclin_rpt
Sigma70_r4
KIF9
Harpin
Motif
Other DBs
NCBI-GeneID:
132864453
NCBI-ProteinID:
XP_060753849
LinkDB
All DBs
Position
17:complement(66334764..66350495)
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AA seq
316 aa
AA seq
DB search
MASTSRGDAFPKVQCPNHPDALLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNEKA
NKDPSRVGDAQNPLLNGGDLTTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAFKE
ISTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKHVQMAATFIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLF
PPDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctacgagccgtggagatgcttttcctaaggtgcagtgccctaatcaccctgat
gccctgttggtggaggactacagagctggggacatgatctgccccgagtgcggcctcgtt
gtcggtgatcgcgtgattgatgtcggctcagagtggaggacgttcacaaatgaaaaagct
aacaaagacccgtcacgtgtcggcgacgcccagaacccgctcctgaacggaggagacctc
acgacaatgatcggaaagggtacaggtgctgcgagttttgatgaatttggcaactcgaag
taccagaaccgcaggacgatgagcagctcggacagagccatgctcaacgcctttaaagag
atcagcaccatggcagacaggataaacctgccccggaacatcgtcgatcgtacaaataac
ctgtttaagcaggtttacgaacagaagagtctgaagggcaggagtaatgatgcgattgct
tcagcatgcctctacattgcgtgcagacaggaaggagttccccggacgtttaaagagatc
tgtgctgtgtctcggatttccaaaaaggaaatcgggcgctgctttaagctcatcctgaag
gctctggagacgagcgtggatctaatcaccaccggagacttcatgtcccgtttctgttcc
aacctgggcctgccgaaacacgtgcagatggcggccaccttcatcgccaggaaggccgtg
gagcttgacctggtcccaggccgcagcccgatcagcgtggctgctgctgctatctacatg
gcctctcaagcctcagccgaaaagaaaactcagaaagagattggtgatatcgccggagta
gctgatgtcaccatccgccagtcataccgtctcatctacccccgagctgccgatctcttt
cctccagacttcaaatttgacacacctgtggataaactgcctcagctgtga
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