Neoarius graeffei (lesser salmon catfish): 132864478
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Entry
132864478 CDS
T10798
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132864478 (ndc1)
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NCBI-GeneID:
132864478
NCBI-ProteinID:
XP_060753882
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Position
17:complement(68473709..68494978)
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AA seq
670 aa
AA seq
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MFSFSQNCWFIRKVVRWRAVSSILWSVLLLPPITSLLVIFIRFSVFHPTHWLSGCLGLLT
EASTLFSVFLLCAAVTLLAFFNLQYYTVVPSIPCSRVALLAEVLHPCQCVHSLVHCAVGM
LVMWCVCVLAGGRYHTLQSPCTHSESGGVDVCLNEYHVFMLLAGAFMGYSHSLMGVVQNI
HYVSFHIIQQYKYMRFKSSAWWLVKCSAVQSLYSVRNYIILYFLFGHIPRTWISNILSLH
IDSSVCSLDSFGGLCDVSLFYQLWISGTFLLLTWNLTVLLFRIYVTEPYRFPVQSLFAED
VDECLPKVLTEKNVLIMKFLALQDLALLSQHSPSRRQEVFSLSQPGGHPHNWNAISKECL
SLLNDLTQRLVAHHDVVASNGRAKPLSERSDTTSNSSSSSVTSGTEDLPETPHRSALIRT
PGSLFGSAVRGVNSPLTTPFTPDLTAQYCSPTLRPLLSPQLAPLPWLGSVHSPHLTRRNP
KLWSTSTDSQADGSPVPSPDPTPRPARDQKPSFLSQWLQNRKEQVKGFLAKRVLVVYLFN
KLPEASSQALFADGQAHIWALEGLSHLVAASFSEDTFGVVQTTLPSILSSLLSLQEAVDR
HFKLPHASSKPVKSSCSLGDSSYKTLRFALRAALKTAIYRITTTFGEHLHAVSIPAEHQK
RLVQFLEYKE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttcagtcagaattgctggtttatccggaaggtggtgagatggagagctgta
tccagtatcctgtggtcggtgctgctgctgcctcccatcacctccctcctcgtcatcttc
atcaggttcagcgtgtttcaccccacacactggctctcaggatgtttgggtttgctcaca
gaggcgagtacgcttttctccgtgttcctgctctgtgcagccgtcactctcctcgccttc
ttcaacctgcagtattacacggttgttccctccatcccgtgttctcgagtggctctcctg
gcggaggtgctccacccttgccagtgtgtccactctctcgtgcactgcgcagtcgggatg
ttggtgatgtggtgtgtgtgcgtcttggccggcggccgctatcacacactccagtctccc
tgcactcacagcgagagtggtggcgttgacgtttgcctgaatgagtatcacgtgttcatg
ctgttggccggagcgtttatgggatactctcacagtttaatgggcgtcgtccaaaacatc
cactacgtctcctttcacatcatacagcaatacaagtacatgcgctttaagagttctgcg
tggtggctggtgaagtgcagcgcggttcagtctctgtattcagtcaggaattacatcatc
ctctatttcctgttcggacacatccccaggacctggatctccaacatactcagtctgcac
atcgacagttctgtttgctctctggactcgtttggaggactgtgtgacgtgtcgttgttc
taccagctgtggatcagcggaacgttcctgctgctcacctggaacctcaccgtactgctc
ttcaggatctacgtcactgagccgtacaggtttccggtgcagtcgttgtttgctgaggat
gtagacgagtgtcttcctaaagtcctgactgaaaagaacgtcttgatcatgaagtttttg
gcgctgcaggatttggcgttgctttcccagcattccccttcacgcagacaggaagtgttc
agtctcagtcagccgggtggtcaccctcacaactggaatgctatcagtaaggagtgtttg
tcactgctgaatgatttaacacagcgtctcgtcgctcatcacgacgtcgtggcgtctaat
ggcagagcgaaacctctgtctgagaggagtgacactacatccaactcttcatccagctcg
gtgacgtcggggaccgaggatcttcctgagactccgcaccgcagcgctttgatccggact
cctggctcactgttcggttccgcggtgaggggtgtgaactcgcccctgaccaccccgttc
acccccgacctgaccgctcagtactgcagccccaccctcagacccctgctcagcccccag
ctggccccgttaccctggctgggctcggtccacagtcctcatctgacccggaggaacccc
aaactgtggagcacgtccactgactcgcaggccgatgggagcccagtgccgtctcctgat
cccacccccagacctgctagagatcagaaacccagctttctgtcccagtggctccagaac
aggaaggaacaggttaaagggttcttggcaaagcgtgtgctggttgtgtatttatttaat
aagctgcccgaggcttcgagtcaagccctgtttgctgatggccaagcgcacatctgggct
ctggaaggattgtctcatctggtcgctgcttcattctctgaggacacgtttggagtggtg
cagactacattacccagcatccttagcagcctgctctctctgcaggaggctgtggaccgt
cattttaagctccctcacgcctccagcaagccggtgaagtcgtcgtgcagtctgggcgac
tcgtcgtataaaaccctgcgcttcgctctgagagcggctctgaagaccgccatctacagg
atcaccaccacgttcggggaacacttacatgccgtcagtattccagcggagcatcagaag
agacttgtgcagttcctggagtataaggagtga
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