Neoarius graeffei (lesser salmon catfish): 132864522
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Entry
132864522 CDS
T10798
Symbol
chd7
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngra03036
]
132864522 (chd7)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
132864522 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
132864522
NCBI-ProteinID:
XP_060753954
LinkDB
All DBs
Position
17:71020362..71132211
Genome browser
AA seq
2917 aa
AA seq
DB search
MADPGMMSLFGDDGNLFSDGLEGLGDCGYASQGQANSINQQMTHEHQAYSQMPSSLHLST
PPVPPQPKMGHHFDHFGQYDPQGSRMMANGPGPGPANGISSPHSHYHGGNGTAGGHHVYP
GAQSDGRGGGPGAGQSFQDGGTAPGNNWGPQGMQRPDQNRAQFPQSQQQQIHGHQMGPYM
GRTEFGGMQGHNQTQTPPRMNHFPQGLPQEANRFMGHMGGNMTSPAMRHPSQTSQHQQSG
QQFLHHHPESQFPQSPSKQQMIGRGHQNMGFSMNNQQVVNSSGQYTPYPQYGGLNQGLAN
ASGMSLNTSSNPNAPVQCYPTPAGPQCYPVNPLXPPQNMHPTQPKMPPQQQHLAPPPPPQ
GSFASPPSMSPMRNLGGNPAGTPPPQRGQGPVSHPQMYGTLSPNQRAMNTPNHAEVLPQQ
LQASVIPFQQVQQVRTPPALSVPQQPPGSSPPLPQGTWASNTHASPPANHQVPHMQHSPS
DVSQALSSIHKLTPSSILQPSSCETQPPDTESKPKKKKKKKKVKAGEETAGEKDEDAGVG
MGGALGGTGGDGVTSLPEKKSKKKPKEKDAKEAKEPKTPKTPKEPKEVKEKKVKTTKPKS
TKKPSSKKSDTENSTKKEGKRKRESSITSDTEKTPPHSPEEEDDDGVQKRRSSRQVKRKR
YTEDLEFRISDEEDDEDSAGPKSPSTTSEQTEVPDADGPVVEKIMGLRKVKKQLELGQEV
EIEEFYVKFKSFSYLHCRWADLEELEKDKRIHQKVKRFKAKQAHNNFLTEMDDEPFNPDY
VEVDRVLDVSESTDENGEPVSLYLVKWCSLPYEDSTWELKADIDAGKIEEFERVMSREPQ
LNRVERPPASDWQKSESSREYKNSNALREYQLEGVNWLLFNWYNTRNCILADEMGLGKTV
QSITFLYEIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQAYEM
NYRDTQGRVIKGAYKFHAIITTFEMILTDCPELRGVPWRCVIIDEAHRLKNRNCKLLEGL
KLMDMEHKVLLTGTPLQNTVEELFSLLNFLEPERFPSESTFMQEFGDLKTEEQVQKLQGI
LKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKSGGGGGSSVP
NLLNTMMELRKCCNHIPHLINGAEEKIMEEFRESHPADLPDFHLQAMIQQRGKLVLIDKL
LPKLKAGGHRVLIFXQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSXSDSD
RFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRN
SYEREMFDKASLKLGLDKAVLQSMSGRENTANGVQQLSKKEIEDLLRKGAYGALMDEEDE
GSKFCEEDIDQILQRRTQTITIESEGKGSTFAKASFVSSGNRTDISLEDPDFWQKWAKKA
ELDLDVLNGRNTLVIDTPRVRKQTRHYSSIKEDEMMEYSELESDSEEKPVQKARRPQDRA
QGYPRSECFRVEKNLLVYGWGRWKDILSHGRFKRPLHERDVEMICRALLAYCLLHYRGDE
NIKSFIWDLITPTEDGQSKTLTNHSGLSAPVPRGRKGKKGKLPAAQMNMPQADWLAECNP
DVLLQEDSYKRHLKHHCNKVLLRVRMLYYLRQEVIGGLADRILDGADSSELDIWIPQPLH
AEVPTDWWDVEADKSLLVGVFKHGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGADM
VADGEDEDPEYRPLRMPFKDDLDDFTNSPLDDKEEMMDVESGEAPKASENGGKSGTLYWP
TASALTARLRRLITAYQRCHKRQEMLIKPDGRRRRRHRDDHLLTMATESGAYSLEPTRVA
ATAYLSEGASFVKTSAFLHDSTALLADGAAFFKERRQRWTRREEADFYRVVSTFGVVYDV
QRKRFDWAQFRAFARLDKKTDESLEKYYYAFVAMCKRVCRMQVKDSELADPTLIIDPITE
ERASRTLYRIELLRRIREQVLPHPELEERLRLCQPSPDLPAWWEAGKHDRHLLHGAAKHG
VSRTDYHIQNDPELGYLQAQRKFIQSRGAETALTSNPLASVELIKDEELKDELKYDTAEK
VDLEEVEEKTEAVSPKQEEEKMETENGAEVKSEESRNIPQVIKEKVTESEDMPTLPVPVG
KDSNKEEQENLMGTENHKPNTEKNSEEEEEKMDEDDKSEKSSQAEAGTSSDRKNFDEESN
ASMSTARDETRDYFGMDDVEPSVSQVFGERSAFSFWPKDRVMINRLDNICEAIIKGKWPS
NRRQFFDLPGLLPGYGAMATDSPMPRRSIGDFTVMNQSSYSGSDDITMSPQVNKDEALSL
SVPRQRRRRRRKVEIEAERAAKRRNLMEMVAQLRESHATEGQTRAVDLTKALHGLAPSSS
SVFPGAGASPMELLHAAGASRANGAMLEAEIPTRRRRGRRKNVEGLELLFMSNKSSQLNT
EDSNGTKGFADGAHVSARAPRHVPAPAQKEGGDHLKGEDGASTKDLQEWLRQHPTYTMDV
PGYIPKSEELLLSQLGKPKQKRHRCRNPNKIDINTLTGEERVPVVNKRNGRKMGGAMAPP
MKDLPRWLAENPEFAIAPDWTDIVKQSGFLPESMFDRLLTGPVVREEGVRRRGRRPKSEI
AKAAAAQASLSAASASTSGVNPFLLNGLFGGMDLNSLQNLQNLQNLQLLMGLSPSLGAGA
ADNKTATTMLPLMLPAMGALPNVFGLGGLFGGSMAAAANLNANTTATSESEETKKDGESK
EEGEEKEEGEKSAETELSDANAAAAAANLSANPLAFNPFLLSTMAPGIFYPSMFLPPGLG
GLGLPGFSPAALTELQNAMSGALGVTGEEKEVNKETVQNQEAVKPSSTLENSDSEEGENK
PEDQTGADEELDSVEAGEEEEDDDDEEDGGEDEDKSD
NT seq
8754 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccccggcatgatgagtctcttcggagatgatgggaatttattctcggacggt
ctggaaggcttaggggattgtgggtatgcctcccaaggccaagccaattcgataaaccag
cagatgacgcatgagcaccaagcttacagccagatgccgtcttccctccacctttccaca
ccacctgttccccctcagcccaaaatgggacaccactttgaccactttgggcagtatgac
cctcaaggaagccgcatgatggctaacggtcccggccctggccccgcgaatgggatctca
tctcctcattctcattaccatggcggaaatggcacagctggtggacatcacgtctatcca
ggagcacaaagcgatgggagaggaggaggaccaggagcaggacagtcattccaggatggt
ggaactgcacccgggaataactggggtcctcaaggtatgcagaggcctgaccaaaatcga
gcccagtttccacagtcgcaacagcagcaaattcacggtcatcaaatgggtccttacatg
ggacgcaccgaatttggtggaatgcaagggcacaaccagactcagactccaccaaggatg
aaccacttccctcaaggtttgcctcaggaggcaaaccgtttcatgggacacatgggaggt
aacatgacgtctccggccatgcggcatccctctcagacgtcacagcatcagcagtctggt
cagcagtttctgcaccatcacccagagtcacagttcccccaaagtccatcaaagcagcag
atgattggacgaggtcaccagaacatgggctttagcatgaacaaccagcaagttgttaac
agctcaggtcaatacactccttatcctcaatatggcggcctgaatcagggattggccaat
gcttcagggatgagcctcaacaccagcagcaaccccaatgctcctgtgcagtgttacccc
acccctgctgggccacagtgttacccagtcaacccgttanncccccctcagaatatgcat
ccgacacagcccaaaatgcccccgcagcagcagcacctcgctcctccaccacctcctcag
ggatcttttgcttctccaccttcaatgtcgcccatgaggaacctggggggcaaccctgct
gggactccgccccctcaaaggggccagggcccagtctcacacccccagatgtatggcacc
ttgtcgcccaatcagagagcgatgaacacacccaaccatgcagaggttctcccacagcag
ctgcaggcatctgtgataccgttccagcaggtgcaacaggtgagaactccacctgcgctt
tcggtgccccagcagcctccaggctcatctccaccgctgccgcaagggacctgggcctcc
aacacgcacgcatcaccaccagctaaccaccaagtgcctcacatgcagcattctccatca
gatgtttcccaagctctgtcctccatccacaagttgaccccaagctccatcctgcagccc
agcagctgtgagactcagccacctgacacagagtccaagcccaagaagaagaaaaagaag
aagaaagtgaaggcaggagaggagactgcaggggagaaggacgaggatgctggcgtgggt
atgggtggagcattaggaggcactggaggtgatggtgtgacctctctgcctgagaagaag
agcaaaaaaaaaccaaaggagaaagatgccaaggaggcaaaagaacccaagacccccaaa
acgcccaaagaacccaaggaggtgaaggagaagaaagtcaagacgaccaaacccaagagc
accaagaagcctagcagcaagaagtctgacactgagaacagcactaagaaggaggggaag
aggaagagggaatcgtccatcacttcagatacggagaaaactccaccccattctccagag
gaggaggatgacgacggggtccagaagcggcgctcgagtcgacaagtgaagagaaaacgc
tacactgaagatctggagttcaggatctctgatgaggaggatgatgaagattctgcagga
cccaaatctccgtctaccacatctgaacaaactgaggtgcctgatgctgatggtcccgtg
gtggagaagatcatgggactgcgtaaagtgaagaagcagctggagttgggacaggaagtg
gagatcgaggaattttatgtcaagttcaagagtttctcgtacctgcactgtcgctgggct
gatctagaggaactggagaaggacaagagaatccaccagaaagtgaagcgctttaaggcc
aaacaggcgcataacaacttcctcaccgagatggatgatgagccgtttaacccggattat
gtggaggtggacagagttctggatgtttctgagagcacagatgaaaatggagagccggtg
agtctgtacctggtgaagtggtgttccctgccgtatgaggacagcacgtgggagctgaag
gccgacatagacgcagggaagattgaagagttcgagcgagtgatgagtcgagagccgcag
ctgaatcgtgtggagcgacctccggctagcgactggcagaaatccgagagttcccgggaa
tataaaaacagcaatgcgctcagggaataccagctggaaggagtcaactggctcctgttc
aactggtacaacacacgcaactgtatcctggcggatgagatgggtttggggaagactgtg
cagtccatcacattcctgtatgagatctacctgaaggggatccatgggccgttcctggtc
atcgctcctctctccaccattcccaactgggagcgggagttccggacatggactgagctc
aacgtggtggtgtatcacggcagtcaggccagtcgcagaaccatccaggcctacgagatg
aactacagagacactcagggtcgtgtgataaagggggcctataaattccacgcaatcatc
acgacgtttgagatgatcttgacagactgtccggagctgcgtggcgttccatggcgctgt
gtgatcatcgatgaggctcacaggctgaagaacaggaactgtaaactgctcgagggactc
aagctcatggacatggaacacaaggttctcctgacaggaaccccactacagaacacagtg
gaggaactcttcagcctcctgaacttcctggagccggagcgctttccctcagagtccacc
ttcatgcaggagtttggagacctcaaaactgaagaacaggttcagaagctgcagggaatc
ctcaaacccatgatgctgcggagactgaaagaagatgtggagaaaaacctggcaccaaaa
gaggagaccatcatcgaggtggagctcaccaacatccagaagaaatactacagagccatc
ctggagaagaacttcaccttcctgtccaagagtggaggaggaggaggatcgagtgtcccc
aacctcctgaacaccatgatggagctgcgcaagtgctgtaaccacatccctcacctcatc
aacggagcggaggagaagatcatggaggagtttagggagagccacccggccgatctgccg
gattttcacctgcaggcgatgattcagcagcgggggaagctggtgctcatcgataagctc
ctccctaaactgaaggctggcggtcaccgcgtgctcatcttcntccagatggtgcgctgc
ctcgacatcctggaggattacctcatccagagacggtatccgtatgagcgtattgatggc
agagtgagagggaacctgcgccaggctgctatcgaccgtttttccnngtccgactcggac
cgcttcgtctttctactgtgtactcgggccggagggctgggaatcaacctgaccgccgcc
gacacctgcatcattttcgactcagactggaatccacaaaatgacctgcaggcccaggct
cgatgccaccggatcggtcagagtaaagcggtgaagatttaccgcctgatcaccaggaac
tcgtatgagagagagatgtttgacaaggccagtctgaaactgggtctggataaagctgtg
ctgcagtctatgagtggaagagagaacactgctaacggggtccagcagctgtccaagaag
gagattgaggatctgctgcgtaagggagcatacggcgctctgatggacgaggaggacgag
ggctccaaattctgtgaagaggacatcgatcagatcttacagagacgcactcagaccatc
accatcgagtctgagggcaagggctccaccttcgccaaggcgagtttcgtgtcgtcgggg
aacaggactgatatttcactggaggatccagatttctggcagaagtgggccaagaaagct
gagctggacctggatgtccttaatggcaggaatactctggtgatcgacacgccacgggtg
aggaaacagacccggcactacagctccataaaagaagatgagatgatggagtactctgag
ctggagagcgactctgaggagaaaccggttcagaaagctcgccggccgcaggaccgggct
cagggctacccccgcagcgagtgtttcagggtggagaagaacctcctggtttatggctgg
ggacggtggaaggacatcctttctcacgggcggtttaagcgtccgctacatgagcgggat
gtggagatgatctgcagagcgctgctggcctactgccttcttcactacagaggagacgag
aacatcaagagcttcatctgggacctgatcactccgactgaggacggacagagcaaaaca
ctaactaaccactcaggtctgtctgctcctgtaccacgaggtcgtaaagggaagaagggg
aaattaccagcggctcagatgaacatgcctcaggctgattggctggctgagtgtaatcca
gatgtgctgctgcaggaggacagctacaaacgccacctcaaacatcactgcaacaaagtg
ttgctgcgggtgcgaatgctctactatctgagacaggaagtgatcgggggcctggcagac
cggatcctggatggcgctgattccagtgagctggatatctggatcccacagccgctccat
gctgaagtccccactgattggtgggatgtggaggctgataaatctctcctcgtcggtgtg
tttaaacacggttatgagaagtataactcgatgcgagccgacccggcgctgtgttttttg
gagcgagtgggaatgccggatgccaaagccatcgccgctgagcagaggggagcggacatg
gtggcagatggtgaggatgaagacccggagtatagaccactgcgtatgcccttcaaagat
gatctggatgatttcaccaactctcctctggacgataaagaggagatgatggatgtcgag
agtggtgaagccccgaaggcgagtgagaacgggggtaaaagcgggactctgtattggccc
acggcttcggctctcaccgcacgcctgcgtcgcctcattactgcgtaccagcgctgccac
aagagacaggagatgctgattaaaccagatggacgtagacgccgacgtcaccgtgatgac
cacctcctcactatggcaacggagagtggggcgtacagtctggagcccactagagtagct
gccacagcgtatctatctgaaggagcttcgtttgttaaaacctcagcgttcctgcatgac
agcaccgccctgttggccgacggagctgctttcttcaaagagagacgtcagagatggacg
agacgtgaagaggctgacttttaccgtgtggtttccacattcggggtggtttatgacgtc
cagaggaagcgttttgactgggcgcagttccgggccttcgctcgtcttgataagaagact
gacgagagtctagagaaatattactacgcctttgtggccatgtgcaagcgggtgtgtcga
atgcaggtcaaagactctgagctggctgacccgacgctgatcatcgacccgatcacagag
gagcgagcctcccggactctgtaccgtatcgagttactgcggcggattagagagcaggtt
ctgccccaccccgagctggaggagagactccgcctgtgtcagcctagtcctgacctcccg
gcctggtgggaggcgggaaaacacgaccggcaccttctccatggagccgccaagcatgga
gtgagtcgtacggactaccacatacagaacgaccctgagctcggctacctgcaggcgcag
cgcaagttcatccaaagccgaggagccgagacggccctgacctccaaccctcttgccagc
gtggagctgattaaagacgaggagctgaaggatgagctcaaatacgacactgcagagaag
gtggacctcgaggaagtggaggagaaaactgaggctgtctcacccaagcaggaagaggag
aagatggagacagaaaacggagcagaagtgaagagcgaagaaagtcggaacattcctcaa
gtgattaaagagaaggtcacggagtctgaggacatgcctacacttcctgttcctgttggc
aaagactcaaacaaagaggagcaggagaacctgatgggtacagagaaccacaaacccaac
acggagaagaattcggaggaggaggaggagaagatggatgaagacgacaaatcagagaaa
tcctcacaggctgaagccggcacatcctcagacaggaagaactttgatgaggagagtaac
gcctccatgagcacagcacgagatgagacaagggattatttcggcatggacgatgtcgag
ccctccgtgtctcaggtgtttggtgaacgatctgcgttctccttctggccaaaggaccgg
gtgatgatcaatcggctggacaacatctgcgaagcgatcatcaagggcaagtggccatcc
aataggaggcagttctttgacttgcctggcctgttgcctggatatggtgccatggcaacg
gacagccctatgcccaggaggagcattggagacttcactgtgatgaatcagagcagctac
agcgggagtgatgacatcaccatgtcaccacaggtcaataaggatgaagcactgagtctg
tctgtcccacgtcagcggagacgcagaaggaggaaagtggagatcgaggctgagcgagct
gctaagcggcgtaacctgatggagatggttgcacagctcagagagtctcacgccacagag
ggtcagactcgagctgtggatcttacgaaagctctacatggcctggctccttcctcctct
tcagtgttccctggcgccggggcttcgccgatggaactgctgcatgctgctggagcctct
agagccaatggagccatgctggaggctgaaattcccacacggaggaggagaggacgccgg
aaaaatgtcgagggcctcgagctgctcttcatgagcaataagagttcgcagctcaacacg
gaagattcaaacgggaccaaaggttttgcggacggggcacatgtgtcagcacgggcaccg
agacacgttccggctcctgcacagaaagagggcggcgaccatcttaaaggagaggatggc
gcgagcactaaagacctacaggagtggcttagacagcatcccacctacaccatggatgtg
cctggatacataccaaagagtgaggagcttctcctctcacagctgggtaaaccgaagcag
aagagacatcggtgtcgaaacccaaacaagatcgacatcaacacactgaccggagaggag
agagtgcctgtggtcaataagaggaacggccgaaagatggggggtgctatggctcctccg
atgaaggatctgccacggtggctggctgagaatccagagttcgccatcgctccagactgg
acagacattgtcaaacaatctggtttcctgcccgagtccatgtttgatcgtctcctgacc
ggtccggtggttagagaagagggggtccggcgccgaggacgaagacctaaatccgagatt
gcgaaagcagcagcggctcaagcttctctgtctgcagcttcagcctctacctcgggcgtg
aaccccttcctgctgaacggcctgtttgggggaatggacctaaacagcctgcagaaccta
cagaatcttcagaacctgcagctcctcatgggcttgtctccttctctgggtgcaggagct
gcagataacaagactgccaccacaatgttgcctctcatgctgcctgccatgggtgccctg
cccaatgtctttggccttggggggctttttgggggcagcatggcagctgctgctaacttg
aacgcaaacaccacagccacctcagagtctgaggagacaaagaaagatggagaatccaag
gaggaaggtgaggagaaggaggaaggtgagaaatctgccgagaccgagttaagcgatgca
aatgcggctgctgcagcagccaatctttctgccaaccctctagcgtttaacccattcctg
ctctcaactatggctcctggaattttctacccctccatgttcctgccccctggcttgggt
ggtttggggctgcctggcttttctccagcggctctcactgagctccagaacgcaatgagc
ggtgctttaggagtcaccggagaggagaaggaggtaaacaaggagactgtacagaaccag
gaggcagtgaaacccagcagcactctggagaacagcgactctgaggagggcgagaataaa
ccggaggatcagaccggagcggatgaggaactggactccgtggaggcaggagaggaagaa
gaggatgacgacgatgaggaggacggtggagaagatgaggacaagagtgactga
DBGET
integrated database retrieval system
