Neoarius graeffei (lesser salmon catfish): 132865943
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Entry
132865943 CDS
T10798
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ngra00535
]
132865943 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ngra00537
]
132865943 (gpc6a)
Proteoglycans [BR:
ngra00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
132865943 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ngra00537
]
Others
132865943 (gpc6a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
Motif
Other DBs
NCBI-GeneID:
132865943
NCBI-ProteinID:
XP_060754421
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Position
18:complement(12771042..13152927)
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AA seq
584 aa
AA seq
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MVRLQVCVLALSVALCLCAGGRGAERERVEDEDEDGEDGVSRSCGDVKHALVERGFTAIR
MNQRQTAGEHLRVCSQEYTCCGVEMEDALALRSKVDLEHLMEESSSTLRTVFTTKHREFD
EFFLKLLDNSEKSLNHMFVRTYGNLFMQNSEIFEDLFSELRRYYTGGNVNLEEMLGDFWA
RLLEKMFQLLNSQFSFTDEYLECVSKYTDQLKPFGDTPRKLKLQITRALAAARTFVQGLM
VGREVANRVAKVNVSPGCSKALTRMLYCPYCGGFVDLKPCRSYCQNVMKGCLANQADLDP
EWNVFIDSMLLVAERLKGPFNIEAVMEPIDLKISEAIMTMQENSIQVSAKVFQGCGHPKP
VRSGSGRSTREVFNARFKPYSPEDMPPLESTGLDRLRSVWRTMQNSVIEIKEKLKKAKKF
WTSLPDVICSKENVIEPNSDQCWNSHAKGRYFPEVVKDGLTNQLSNPEVEIDITRPDTFI
RQQIMALRVMTNKLRSAYNGNDISFQDSSDEVSGSGSGSGYTTEFEFTGTEAPAVGAGRQ
DQATPLRPASDKATPLRPPTDKAPPLITSPITLMTVTLLQFWWR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggctgcaggtgtgtgtgctggctctatccgtggcgctctgcctctgcgcggga
ggacgaggagctgagcgcgagcgcgtggaggatgaggatgaggatggtgaggatggagtc
tcgcgcagctgcggggatgtcaagcacgcgctcgtggagagaggattcactgccatcagg
atgaaccagcgccagaccgcaggtgagcacctgcgtgtgtgttctcaggagtacacatgc
tgtggggtggagatggaggacgcacttgcacttcgcagtaaagtcgatcttgaacacctg
atggaggagagcagcagcactctgagaaccgtcttcaccaccaaacacagggagttcgat
gagttcttcctgaagttgctggacaactcggagaagtctctgaaccatatgtttgtccgc
acctacggaaacctgttcatgcaaaactctgagatcttcgaggacctgttctcggagcta
aggcgctactacacaggaggaaatgtgaacctggaggagatgctgggtgacttctgggcc
aggcttctggagaagatgttccagctactgaactctcagttctccttcacagatgagtat
ttagaatgtgtgagcaagtacacggaccagttgaagccgttcggagacacgccacgcaaa
ctcaagctccagatcacacgtgccctcgctgccgcacgcaccttcgtccagggactcatg
gtgggacgggaggtagccaaccgtgtggctaaggtgaatgtgtcccccggctgcagtaag
gctctgacgcggatgctgtattgtccgtactgtggcgggtttgtggacctgaagccgtgc
aggagttactgtcagaatgtcatgaagggctgcctcgcgaatcaggctgacctagaccca
gagtggaacgtcttcatcgactccatgctcctggtagctgagaggttgaaagggccgttt
aacatcgaggctgtgatggagcccatcgacttgaagatctctgaagccatcatgaccatg
caggaaaacagcatacaagtctccgccaaggtgtttcaaggttgtggtcatcccaaacca
gtcagatccgggtcagggcggagcacccgcgaggtgtttaatgctcgtttcaaaccctac
agtcctgaagacatgcctccattagagagcaccggccttgatagactgaggagcgtctgg
agaacaatgcagaacagcgtgattgagattaaggagaaattgaagaaggccaaaaagttc
tggacatcacttcctgatgtgatctgttcgaaagagaatgtgatcgaaccaaacagtgac
cagtgctggaacagtcacgctaaaggaaggtattttccagaggttgtgaaagatggcctg
accaaccagctgagtaatccagaggtagagatcgacatcacccggccagacaccttcatc
cggcagcagatcatggctctgagagtgatgaccaacaaactgcgcagtgcttacaacggc
aacgacatctccttccaggactccagtgatgaggtcagtggctctggcagcggaagcggc
tacaccactgagttcgagttcacaggcacagaggcaccagcagtgggggcggggcgtcaa
gaccaggccacacctctacgacctgcatctgataaagccacgcctcttagaccgcctact
gacaaggcgccgcctcttatcacctcaccgatcactttaatgacggtcacgttgcttcag
ttctggtggagataa
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