Neoarius graeffei (lesser salmon catfish): 132866005
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Entry
132866005 CDS
T10798
Symbol
grin2ab
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04020
Calcium signaling pathway
ngra04080
Neuroactive ligand-receptor interaction
ngra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
132866005 (grin2ab)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132866005 (grin2ab)
04082 Neuroactive ligand signaling
132866005 (grin2ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngra04040
]
132866005 (grin2ab)
Ion channels [BR:
ngra04040
]
Ligand-gated channels
Glutamate (ionotropic)
132866005 (grin2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
132866005
NCBI-ProteinID:
XP_060754535
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All DBs
Position
18:complement(22173525..22365186)
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AA seq
1454 aa
AA seq
DB search
MGVAVRLAFMAWALLGWSQAAKSAPSLSVAVILGETRGVSEQALRPAPGIGAPLDISVLA
VQVNHTDPGSMLTHLCQLMGRQRLHGLVYGDGTDQEAIAQMLDFVSSQTAMPILGVHGGA
AMTMAEKDASSSFFQFSASLHQEALLMLAVMEEYDWHVFSVVTTRFPGHQEFVTTIRVTV
EHSFVRWDLQSVVTLDGVGEPEDRAHVQLKRIQSPVILLYCSKDEAELVMVEARSLGLVG
AGFVWIVPSLTSGNPERTPETFPPGMISIAYDEWDYPLETRVRDAVGIFSHAAATMFREQ
GRIPDGTVSCSGQAEKSDVPPSALRRYMMGVNLEGRDLSFMDDGYQVNPKLVVIVLNTER
EWEKMGRWENHSLILKFPVWPRYNSFGDAEADENHLSIVTLEEKPFVIVDDVDILTGTCN
RNSVPCRKHIKDNTTGGSYLKQCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGKKINNV
WNGMVGEVVYKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEP
FSASVWVMMFVMLLIVTAIAVFLFEFISPLGFNRNLAQGKDPHGPSFTIGKAIWLLWGLV
FNNSVPVQNPRGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDRKFQS
PYSFSPPFRFGTVPNGSTERNIRKNYPDMHQYMVKYHQSGVQDALISLKTGKLDAFIYDA
AVLNYMAGRDDGCKLVTIGSGYVFATTGYGIALQKGSYWKRFVDLAILGIIGDGEMEELE
AQWLTGICHNEKNEVMSSQLDVDNMAGVFYMLAAAMALSLFTFCWEHLFYWRLRYCFTGL
CSGRPGLLFTISRGIWSCIHGVHIEMKKLPELDFSPQANMLHLLKSAKEITTLGVTSPKQ
PISSILPPTSGLLEFMTGGKGNNLAPKDAIYNNTNTMLSNRHKEPLNNTLLPGQCALSLA
DAQPGVPGSGGTGGGGSGGGDSGVPASKSRALWKKSVETLRQNQGPTKNSPPSSASVFES
HATMKSQRYLPEDLPARSDVSDCSGRMDLQKQHKVKDTLRKRNRLPRDLSDVELSALPSQ
AREQSNHNAQIYSQNSQSSQIYTIDSVDQEHGLHYPDIFNEHRDNKHRPSSSSEQQPILQ
LNSNLFPQAHEPDVMQNATTAAKEKKYNTYGKPGGVGLGPAVTTPAQDHRQTHCRSCLSK
FSSYSGLYTMRPPQYRCDACLHSANLYDISEDQFLHPNVGAIRGGSVDRSFCAFLPHPNA
SFMAYLPQSDQEGEGLISHYQNEGIYIHRQHSYENLPQKNSSRRVSLQDSTPHTNLHTST
MVPDKLPKSQSAQLNHTLASVGVSGLGIGRRSKSMYPGHPTENPFLQTLRDDQRLAHGRS
ATDIYKQLVPLTLSPVVDSKGLGIGVATPDLFYPEHVMPYVALSPVGTFPAPRAMSAGGT
RRVYKRMPSIESDV
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgcagtacgcctggcattcatggcctgggctctgctgggctggtctcaggca
gccaagagtgcaccctcactgagtgtggcggtgatcttgggtgagactcgtggtgtctct
gagcaggcattacgcccagcaccaggtatcggagcaccactggacatcagtgtgcttgct
gtgcaggtgaaccacacggacccaggcagcatgctcacccacctgtgccagcttatggga
cgccagcgattgcatggccttgtgtacggcgacggaaccgaccaggaagctatcgcccag
atgctggactttgtctcttcccagactgccatgcctatcctgggtgtccatggaggtgca
gccatgaccatggctgagaaggatgccagctcatcttttttccagttcagcgcttcactc
catcaagaagccctgctcatgctggctgtcatggaggaatatgactggcacgtgttctcc
gtggtaacgaccaggttccccggccaccaggagtttgtaacgacaatccgcgtgactgtg
gagcacagtttcgtccgctgggacctgcagagcgtggtgacgctagacggcgttggtgag
cctgaggacagagcacatgtgcagctcaagcgtatccagtcgcctgtcattctgctctac
tgctccaaggacgaggccgagctggtgatggtcgaggcccgatcactcgggttggtgggc
gctggcttcgtgtggatcgttcccagtcttacatctggcaacccagagcgtacacctgaa
acctttcccccaggaatgatttccatagcgtatgacgagtgggactatccactggaaacc
cgtgtgagggacgcggtggggattttcagtcacgctgcagccaccatgtttcgagagcaa
ggccgcataccagatggaacggtcagctgctcaggtcaagcagagaagtcagacgttcct
ccaagtgcattacgcaggtatatgatgggtgtaaatctggagggcagagatctgtcattc
atggacgatggttatcaggtgaacccgaagctggtggttattgtcctcaacacagagaga
gaatgggagaagatgggccgctgggagaaccattcactgatattgaaatttcccgtgtgg
cctcggtacaactcctttggagacgcagaagcagatgaaaatcacctgagcatcgtgacg
ttagaggagaagccgtttgttatcgtggacgacgtggacattctgacggggacatgcaat
cgtaactctgtcccctgcaggaaacacatcaaagataacactacaggtggatcgtatcta
aagcagtgctgtaagggcttttgtattgatatcctaaagaagatcgccaggaacgtaaag
ttcacatacgacctttacctggtgactaatggcaaacacggcaagaaaatcaacaacgtg
tggaacggcatggtgggcgaggtggtttataagaaggcagtgatggctgttggttcactg
accataaatgaggagaggtcagaggtcattgacttctccgtaccgttcgtggagacgggg
atcagtgtcatggtttcccgcagtaacggaaccgtatcgccctcggccttcctggagcca
ttcagtgcgtcggtgtgggtgatgatgttcgtcatgttactcatcgtcaccgcaatcgcc
gtcttcctgtttgagttcatcagtcccctgggcttcaacagaaacctcgcgcagggcaaa
gaccctcatggtccttctttcaccatcggcaaagccatctggctcctgtggggtctcgta
ttcaataactctgtaccagtacagaaccctagaggcacgaccagtaagttcattgtgtcc
gtgtgggccttctttgccgtgatcttcctggccagttacactgcgaacctggctgccttc
atgatccaggaggagtttgtggaccaggtcactgggctcagtgacagaaaattccagagc
ccatattccttctcaccgccatttcggttcggtacagtcccaaatggcagcactgagagg
aacatcaggaagaactacccagacatgcaccagtacatggtcaaataccaccagtctggc
gtccaggatgcattgatcagcctcaaaacgggcaagctggatgcattcatctacgacgca
gctgtattgaactacatggcagggcgagatgacggctgtaaactggtgaccatcggcagc
ggctatgtcttcgccaccactggttacggtatcgccctccagaaaggatcctactggaag
cggtttgtggaccttgccattctagggatcattggagatggtgagatggaagagctggag
gctcagtggctcacgggtatctgccataatgagaaaaatgaagtgatgagcagtcagctg
gatgtggacaacatggctggtgtgttctacatgctggcagctgccatggcactctctctc
ttcaccttctgctgggagcacctgttctactggcgactgcgctactgcttcactggactg
tgctcgggacgacctggacttctctttaccataagcagaggtatctggagttgtattcat
ggcgttcacattgagatgaagaagcttcctgagttggatttcagtcctcaggccaacatg
ttgcacctgctgaaatcggccaaagagattaccactctgggggtaacatcaccgaaacag
cccatctccagcatcctccctccaacatctggactgctagaatttatgactggtggcaaa
ggcaataaccttgctccaaaagacgcaatctacaacaataccaacaccatgctttcaaat
cgccacaaagagcctctaaacaacacccttttgcctggtcagtgtgcccttagcctagct
gatgcccagcctggtgtgccaggtagtggaggcacgggaggtggtggtagtggtggtggt
gattcaggagtaccagcttccaagtcccgtgctctctggaagaagtcagtcgaaactctg
cgacagaaccaaggacctaccaaaaattctccaccttcctctgcatcagtctttgagtca
catgcaactatgaaaagccagaggtatttgcctgaagacctgcctgcacgctcagatgtg
tctgactgctctggccgcatggacctacagaagcagcacaaggtcaaagacacactccgg
aagcgtaaccgcctgccacgggacctaagtgacgtggaactctctgctttgcccagtcaa
gccagagaacagagcaatcacaatgctcagatctattcccagaatagtcagagcagccag
atctacaccattgactctgtagatcaggagcatggactacactacccagacatattcaat
gagcacagagacaacaagcatcgcccttcatcttcttcagagcaacagccaatacttcag
cttaacagcaacctgtttcctcaggctcatgagccagacgtcatgcagaatgccacaact
gctgccaaggagaagaagtacaatacttacggaaaacctggcggggtaggactgggtcca
gcagtgaccactcctgcccaggaccacagacaaacccactgccgtagttgtctgtcaaag
ttctccagctattctgggctttataccatgcgacctcctcaatatcgctgtgatgcctgt
ctgcactctgccaacctgtatgacatcagtgaggatcagttcctgcaccctaacgtaggt
gccattcgaggcgggagtgtagacaggagcttctgtgcatttctaccacatcccaatgct
tccttcatggcctaccttccccagagtgaccaagaaggtgaagggctcattagccactat
cagaacgagggtatttacatccatcgacagcactcttatgagaacctgcctcaaaagaat
tcttcacgacgtgtgagccttcaggacagcactcctcacactaacctgcacacatccacc
atggtcccggataagcttccaaagagccagtcagcacagctcaatcacacgcttgcttca
gtaggtgttagcgggcttggcattggtcggcgcagcaaatcgatgtacccaggccatccg
acggagaaccctttcctgcagacgctccgcgatgaccagcgcctggctcacggtcgcagc
gccacggacatttacaaacagctggtaccacttacattaagtccagttgtcgacagcaag
gggctcggcataggggtggcaacacctgacctcttttaccccgagcatgtgatgccttat
gtagccctttccccagttggcacattccctgccccaagagcaatgagtgctggtggtaca
cgacgcgtctacaagagaatgcccagtatcgaatccgatgtctga
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