Neoarius graeffei (lesser salmon catfish): 132866087
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Entry
132866087 CDS
T10798
Symbol
tfdp1b
Name
(RefSeq) transcription factor Dp-1b
KO
K04683
transcription factor Dp-1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03083
Polycomb repressive complex
ngra04110
Cell cycle
ngra04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132866087 (tfdp1b)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
132866087 (tfdp1b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
132866087 (tfdp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132866087 (tfdp1b)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132866087 (tfdp1b)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
132866087 (tfdp1b)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
132866087 (tfdp1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
132866087
NCBI-ProteinID:
XP_060754648
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Position
18:complement(30335063..30441268)
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AA seq
404 aa
AA seq
DB search
MMARDCGLKETSGELKVFTTQNVSPGAGAVVSLVSVHPSVTGVKQIMPKALGAPGINVLS
HVVIGTPQRPTAPAGAALLSSPRTPSAQFLTPQTQVRESSPWSSGRSSRRGDKNGKGLRH
FSMKVCEKVQKKGVTSYNEVADELVTELSSGDNISPNESHVYDQKNIRRRVYDALNVLMA
MNIISKDKKEIKWIGFPTNSAQECKDLEAERQRRLERIKQKHSQLQELILQQIAFKRLVQ
RNREAEQKNHRPPPNTVIHLPFIIVNTSKKTIIDCSISNDKFEYLFNFDNMFEIHDDIEV
LKRMGMAFGLESGKCTPENLKIARTFIPKALESYVTEMAQGVSRLPSEGYSHTNSDHRAV
ATVASSSNSSYHGSSRDTPASFLEDEDEDEDEDDEDFDEDDDED
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaagagattgtggcctgaaagaaaccagtggagagctgaaggtttttaccact
cagaacgtgagtcctggagcaggtgctgtggtgtctcttgtgagtgtccatccttctgtt
accggcgtgaagcagataatgcctaaagcactcggtgcccctggcattaatgtgctttcg
catgtggtgattggcactcctcagaggcccacagctcctgctggtgctgctctgttaagc
agtcccagaactcccagtgctcagttcctcacgccacagacacaagtgcgagagtcttca
ccctggtctagtggacgcagcagtagaagaggggacaagaatgggaaaggcttgagacac
ttctccatgaaggtgtgcgagaaagttcagaagaaaggagtaacctcctataatgaggtc
gcagacgagctggtgacggagctgagttctggagacaacatctctcccaatgaatctcat
gtgtatgaccagaagaacattcggaggcgggtatatgatgcactaaatgtcctaatggcg
atgaacatcatctccaaagacaagaaggaaatcaaatggatcggcttcccaaccaattct
gctcaggagtgtaaggacctggaggccgagcgccagaggcgacttgaaagaatcaagcag
aaacactctcagcttcaagaacttatactccagcaaatagccttcaagcgcctggtgcaa
aggaatcgtgaggcagagcagaagaaccacagacctcctcccaacacagtcatccacctc
cccttcatcatagtgaacaccagcaagaagaccatcatcgactgcagcatttcaaatgac
aagtttgagtacctgtttaactttgacaacatgtttgagatccatgacgacatcgaagta
ctaaaacgcatgggcatggcgtttgggctcgagtcgggcaaatgcacaccagaaaatctg
aagatagcccggaccttcatacctaaagctttggaatcctatgtaacagaaatggcacag
ggggtctcgagactgcccagtgaaggctattctcatacaaacagtgatcacagagctgtt
gcgactgtggcctccagttccaacagctcataccacggcagctctcgtgacactccggca
tccttcctggaagacgaggatgaggacgaagatgaggacgatgaggactttgatgaagac
gatgatgaagactaa
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