Neoarius graeffei (lesser salmon catfish): 132866156
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Entry
132866156 CDS
T10798
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132866156 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngra03041
]
132866156 (u2af1)
Spliceosome [BR:
ngra03041
]
Complex A
U2 snRNP components
U2 related factors
132866156 (u2af1)
Complex B
132866156 (u2af1)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
132866156
NCBI-ProteinID:
XP_060754738
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All DBs
Position
18:complement(36722948..36764628)
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AA seq
228 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ
TADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVMDLNNRWFNSQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKRHRSRSRSRDRRSRSRDRGRRDRERRRSRDRERSGRF
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacctagcgtccatttttggtacagagaaagacaaggtcaattgctccttc
tactttaagatcggagcatgtcgacatggagatcgctgctccaggctccataataaacca
actttcagccagaccattttgatccaaaacatctaccgtaaccctcagaacagcgctcag
acagctgacgcctctcgctgtgctgtgagcgatgtggaaatgcaggagcattatgatgag
tttttcgaggaagtcttcacagaaatggaggagaagtatggcgaagtggaggagatgaac
gtgtgtgataatctgggtgaccaccttgttggcaatgtttatgtgaagttccggcgtgag
gaggatgctgagaaagctgtgatggacctgaataaccgctggttcaacagccagcccatc
catgctgaactctcgcccgttactgacttcagagaagcctgctgcaggcagtatgaaatg
ggggagtgcactcgaggtggattctgtaacttcatgcatctaaagccgatctctcgcgaa
ctgaggagggaactatacgggcgccgtagaaaaaggcaccgctctcgttctcgctcccgt
gaccgtcgctctcgctcccgggaccgtggccgtcgcgaccgggagaggaggagatcaagg
gatcgtgaacgctccggaaggttttga
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