Neoarius graeffei (lesser salmon catfish): 132866271
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Entry
132866271 CDS
T10798
Symbol
itga6b
Name
(RefSeq) integrin alpha-6b isoform X1
KO
K06485
integrin alpha 6
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04382
Cornified envelope formation
ngra04510
Focal adhesion
ngra04512
ECM-receptor interaction
ngra04514
Cell adhesion molecule (CAM) interaction
ngra04518
Integrin signaling
ngra04810
Regulation of actin cytoskeleton
ngra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132866271 (itga6b)
04514 Cell adhesion molecule (CAM) interaction
132866271 (itga6b)
04518 Integrin signaling
132866271 (itga6b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132866271 (itga6b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132866271 (itga6b)
04810 Regulation of actin cytoskeleton
132866271 (itga6b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
132866271 (itga6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132866271 (itga6b)
04515 Cell adhesion molecules [BR:
ngra04515
]
132866271 (itga6b)
04090 CD molecules [BR:
ngra04090
]
132866271 (itga6b)
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132866271 (itga6b)
Exosomal proteins of breast milk
132866271 (itga6b)
Cell adhesion molecules [BR:
ngra04515
]
Integrins
Integrin alpha subunits
132866271 (itga6b)
CD molecules [BR:
ngra04090
]
Proteins
132866271 (itga6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
FG-GAP_2
LYRIC
Motif
Other DBs
NCBI-GeneID:
132866271
NCBI-ProteinID:
XP_060754942
LinkDB
All DBs
Position
18:48627194..48710969
Genome browser
AA seq
1084 aa
AA seq
DB search
MARYRTVTLVLLCLMECGLISAFNLDTENVIRKTGEPDSFFGFSLALHRQLRPDDRRMLL
VGAPKARKLPNQKSEITGGLYKCDINSASSACQRVNFDNDENPNEESKDNQWMGVTVQSQ
GPGGKIVTCAHRYQKRAYTNTAQESRDITGRCYVLSEDLKINEDTGDEGGDWSFCEGRIK
GHERFGSCQQGLSATFTKDYHYLVFGAPGGFNWKGIVRLEQKNNTLMDMGYYDDGPFEVK
YSTPEGLDRVAIPANSYLGFSLDSGKMLTKKGQLTVVAGAPRANHSGAVVLLKKEFETTS
QMVSEYIIEGEGLASSFGYEVAVVDLNGDGWQDLVVGAPQYFEKDGDIGGAVYIYINQNG
DWDKASKTRINGPKNSMFGLAIANLGDINLDGFNDVAVGAPYDDEGAGSVYIYHGSSDGL
KKEPAQVLKGRDQGIMTFGYSLAGNMDLDNNQYPDLAIGSLSNTVVVYRARPVVNIEKII
NITPKKIDLTKKNCEYGICLQVNACFKYTSTSKTYAPALKIKYTIQVEMKRKDQGLPPRA
KFVSPNPTDTDYENTGDIELRKPNEEECITKQLKLQDNLKDKLRGLPIMVNIELKQSGRR
KRQTGLAELSPILAANKPSNTEVNFVKEGCSNDLTCLSKLKLEYKFCSREQNKDSFKPLP
DLNGVPVISLVDQKEIALEVKVTNKNGDDAYESELTALFPHSLSYSAVRTKKAEKDIVCG
ANQNGSKADCPMGNPFKRNSEAIFYIILSTTGISLNTNEVEVTLELKTTSEQAPQIVTKK
ANVVIELMLSLSGVAKPSQLEFSGNVIGESAVKSETDIGSQIDYEFRVINLGKPLKSFGT
AYLNIEWPKNTAAGKWLLYLMKINTVGTAITSCKPDEVNTRNLFNDTSLSRTKREVKGES
TGNKGVLSPLLSDKRKSKVLTCDSGASCVKIKCPLEGLDSSAVIALRARLWNGTFIEDFA
DLNYVDIIVNASLSLDNAPQNVLLKNRNTQVRVTVFPERKAAQYGGLPWWIILVAILLGL
LLLGLLVFLLWKCGFFKRSKYNDSVPSYNAVRIKKEERARPPRKEQPASVEKKQWMTSWN
ESYS
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgctaccggacggttaccttggtcctcctgtgtttaatggaatgcgggttaatt
tccgccttcaacctggacaccgagaacgtgatcaggaaaaccggggagccggacagcttt
ttcgggttctcgctcgccctgcaccgacaacttcgtccggatgacagaagaatgctgctg
gttggtgctcccaaggcaaggaagctgcccaatcagaagtcagagataacaggaggctta
tacaaatgcgatatcaactccgccagctctgcctgccagcgagttaatttcgacaatgat
gagaacccgaatgaggagagcaaagataatcagtggatgggtgtcacagtgcagagtcaa
ggacccggtggcaagattgtgacatgtgcacatcgctaccagaagagagcctataccaac
acagcacaggagtcccgggacatcacgggccgctgctacgtgctcagcgaggacctgaaa
atcaacgaggacactggtgacgagggaggagactggagcttctgcgagggccgaatcaag
ggtcacgagcggttcggctcctgccagcaaggcctctcggccaccttcactaaggactac
cattacctagtgtttggtgcacctggaggcttcaactggaaaggcattgtacgcttggag
cagaagaacaacacactgatggacatgggttattatgacgatggaccatttgaggtcaaa
tacagcacgcctgaaggacttgacagagtggccattcctgctaacagctatttaggattc
tctcttgactctggtaagatgctgactaagaaaggtcagctgaccgtggtcgctggagcc
ccgagagccaatcacagtggagctgtggttctactgaagaaggaatttgaaacaacttca
cagatggtctctgagtatatcattgagggagaaggcctagcctcatcttttggctacgaa
gtcgcagtggtcgatttaaacggagatggatggcaggatcttgttgtcggagctcctcag
tactttgagaaggatggtgacatcggtggcgctgtctacatctacatcaatcagaatggt
gattgggacaaagccagcaaaactagaataaacggacccaaaaactctatgtttgggctg
gctattgcaaaccttggcgacattaacctggatggatttaatgacgtggctgttggggct
ccgtatgatgatgaaggagcaggaagtgtctacatctatcatgggtcaagcgacggcctc
aaaaaagaacctgctcaggtgctgaagggaagagaccaaggcattatgacgtttggttac
tccttagctggtaacatggatttagacaacaaccaatatccagacttggccattggctct
ctcagtaacactgtggtcgtgtacagagcacggccagtggtcaacatagaaaagattatc
aacatcactcccaagaagatagatctcacgaagaagaactgcgaatacggcatttgtctt
caggtgaacgcttgtttcaaatacacctccacctccaaaacttacgcccctgccctcaaa
atcaaatacactatccaggtggagatgaagaggaaggaccagggacttccacctcgtgcc
aagttcgtctcacccaaccccaccgacactgattatgagaacacaggcgacatagagctt
agaaagccgaatgaggaagagtgtatcacaaaacaactcaaacttcaggataacttaaag
gataagctgagaggcttgcccatcatggtgaacatagagctgaagcagtcaggacgcagg
aagagacaaaccggcctcgctgagctgagtcccatccttgctgccaacaaaccgagcaat
accgaggtgaattttgtgaaagagggctgcagcaatgacctgacgtgcctgagtaaattg
aagctggagtacaagttctgctctcgagagcaaaacaaagacagtttcaagccactgcca
gatcttaatggagtgccagtcatttcactcgttgaccagaaggagattgcgctggaggtc
aaggtgaccaataagaacggagatgacgcgtacgagtcagagctgaccgcattattcccc
cactccctctcttactctgcggttcgcaccaagaaagcagagaaggacatcgtctgcggg
gccaatcagaacgggtcaaaagccgattgtccaatgggaaatcctttcaaaagaaactcg
gaagccatattttacatcattctgagcactactgggatctcgttgaacacgaatgaggtc
gaagttacacttgagcttaaaacgacgagtgaacaggcaccacagatagtgacgaagaaa
gcaaatgttgtaattgagctgatgttgtcgctttctggggtagctaaaccgtctcagctg
gagttctccggaaacgtcatcggagagagcgctgtgaagtcggaaactgacatcggcagc
cagattgactatgaattcagggtgataaacttgggaaagcctctgaagtcgttcggcacg
gcatatctgaacatcgagtggcccaagaacacagctgcagggaaatggctgctgtacctg
atgaagatcaatactgtgggtacggctataaccagctgcaaaccagatgaggtcaacacg
cgcaacttatttaatgatacatcactgtccagaaccaagcgtgaagttaaaggtgaaagc
acaggaaacaaaggagttttatcaccccttctttctgacaagaggaagtctaaagtcttg
acctgtgacagtggtgcatcgtgtgtgaaaatcaagtgtcctcttgagggattggacagc
agcgccgtcattgcactgagagcgcgtctgtggaatggcaccttcatagaggacttcgct
gacctgaattatgtcgacataattgtgaacgcatcactcagtctggacaatgccccccaa
aatgtgttgctgaaaaatagaaatacacaggtacgagtgactgtattcccagaacgtaaa
gcagcacaatatggaggtttaccctggtggatcatcctggtggctatattactgggcctg
ctcctgctgggcttactggtcttcctgctctggaagtgtggatttttcaaacgttccaaa
tacaacgacagcgtgccaagttacaatgccgtgaggattaagaaggaagagcgtgcacgt
ccacccaggaaagagcagccggcctcggtggaaaagaaacagtggatgacttcttggaac
gagagctactcctag
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