Neoarius graeffei (lesser salmon catfish): 132866275
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Entry
132866275 CDS
T10798
Symbol
rims1b
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132866275 (rims1b)
Membrane trafficking [BR:
ngra04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
132866275 (rims1b)
Small GTPases and associated proteins
Rab associated proteins
132866275 (rims1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
Motif
Other DBs
NCBI-GeneID:
132866275
NCBI-ProteinID:
XP_060754946
LinkDB
All DBs
Position
18:complement(49130708..49307779)
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AA seq
1527 aa
AA seq
DB search
MAASVGPQGGPRASVPASMPDIPDLSHLTEEERKIILAVMARQKEEEEKEQAMLKTLHQQ
FESYKEQVRRIGAENKRQQATHKDDAPTCGICRKTKFADGCGHLCSYCQTKFCARCGGRV
SLRSNNVMWVCNLCRKQQEILTKSGEWFSSGPRGRPLSIAGPEADRDGKLRSRSQAIPGA
NLASANNAQPATDRTKGADMPASRARSEPPREKKRPVSLHEQNGKIIVRGERRVGPGRQP
SQASEDRAPGEKRESRRLEKGHSQEYDHPGDTAHPDQRRRKEEEERERERQRREEEYQNR
YCSDPNLARYPVKPQKEEQEMRMHAKVSKMRQERHHSDMAINEVGLAQDGCETPGSRLSR
RAAGSENRKALLENHRAYSVDRTVGGSAGGGPVHLQKQGHSGSHLSPRNSQDLRDGQDWG
LKGYLEPGSAALLHKTKREKAAESFRKDSSLSSDQSECLRPPPPRAYRPKRGLNKRQMSI
SSSEEEGGSTPEYTSCEDVEIESISEKGDWDCHPLDPTVWHHPVTWQPSKEGDHLIGRIT
LSKRSAVPREAGSLLGLKVVGGKITETGRLGAFITKVKKGSLADVVGHLRAGDEVLQWNG
KALPGATKKEVYNIILESQSAPQVEIVVSRPIGDRPRHPEKTHPPLESTGSSSIDESHKV
DRPSISVMSPTSPGMLRDLPQDLPGQLSVKLWYDKVGHQLIVNVLQAIDLPSRPDGRPRN
PYVKMYFLPDRSDKSKRRTKTVKKSLEPRWNQTFLYSHVHRRDFRERMLEITVWDQPRAQ
EEESEFLGEILIELETALLDDQPHWYKLQTHDVSSLPLPQPSPYLPRRHIHTDSPSKKLQ
RSHRIIETDYDDAITVVSSAAERNSRERERCSTLTVPERQAAIQHRSRSVSPHREDQSRG
RSRHTHVPMQRSLDEIRQKRHHSQSPTHYYNPQQEHRSGDSDYDYSEDSEVLEMHRSIRG
GSAECLHTNSSTLPACLKSKSTRRLEGGGVSPRSPAPQRVLRFTDEVSISDLQPSLDRVR
SASTTCLRPESSFRSPDRERLSGSLDKPVCTKTNKKSIDNDRIQPTSILRGSRWRRDGPI
RPFGHSSQDRAHLHGGHNSPTESPLSVRRGRQLPQLPAKSSSIEQALAVEERARQVSQMR
VPSYRPGSSASSAHEQDMDLKNKRDMYKRSCDNMSARSSDSDVSDVSAVSRASSASRLSS
ASYMSVQSERPHGRISRQVRASAGRSMLKSTSVSGEINTPERTDGSQSDTALGTVGSSSS
KKRRASLNARFVAIVGNRRSRSTSQISQTEASNKKSKGGGTIQRSQETGMAVELQHNMSR
QPSRESNNGSMASYNSEGSPIFPAVRVDTQFSDFLDGLGPAQLVGRQTLATPAIGDIQIG
MVNKKGKLEVEVIRARGLIQKPGSKSLPAPYVKVYLLENGAYVAKKKTKIARKTLDPLYQ
QTLQFEESPQGKVLQVIVWGDYGRMDHKSFMGVAQILLEELDLASNVIGWYKLFPPSSLV
DPTLASLTRRASQSSLDSSSGPGGVRS
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctcggtagggccccagggtggcccgcgggcctccgttccggcttctatgccc
gacataccagacttgagccatctcacagaggaggagaggaaaatcatcctggcggtgatg
gcgcgccagaaagaggaagaggagaaggagcaagccatgttgaagacgcttcatcagcaa
ttcgagagctataaggagcaggtaaggcggatcggggcagagaacaaacggcaacaggcc
acccacaaggatgatgccccgacctgcgggatctgccgcaagaccaagtttgctgatgga
tgcgggcacctctgctcctactgccagaccaagttttgtgcccgctgtggtggaagagtg
tctctacgctccaacaatgtgatgtgggtatgcaacctatgcaggaagcagcaggagatc
cttactaaatctggagaatggttctcatcagggccaagaggcaggcctctgagcatcgcc
ggccctgaggctgaccgagacgggaagctgcgttccaggtcgcaggctatacctggagct
aacctagctagtgctaacaacgctcagccagccactgaccggaccaaaggagcagacatg
ccagcatcacgagctcggagcgaacctccacgagagaagaagaggccagtgtccctgcat
gaacagaatggcaagatcattgtcagaggtgagaggagagtgggaccaggcaggcagcct
agtcaggcttcagaagatcgtgctcccggagaaaagcgagagagcaggcgtctggaaaaa
ggccattcgcaagaatatgaccaccctggtgacactgcccaccctgaccagaggcggaga
aaagaagaagaggaacgagagcgggaaaggcagcgacgggaagaggaataccaaaatcgc
tactgtagtgatcccaacttggcccgctatcctgtcaaacctcagaaagaagaacaagag
atgcgtatgcatgccaaagtgtccaaaatgcgacaagaacgtcaccacagtgacatggcc
atcaatgaagtaggcctcgctcaagatggttgtgagaccccaggcagccggctaagcagg
agggcggcaggcagtgaaaatcgcaaggcactactggaaaaccaccgggcatactctgtg
gacaggaccgtggggggtagtgctggtggggggcctgtacacctccaaaaacagggtcac
agtggttctcacttgagccccaggaactcccaagacctcagggatggacaggattggggc
ctcaaaggctacttggagcctggctcagcagcattactacataagaccaagcgtgagaaa
gctgccgaaagcttccggaaagattcttctctcagttcggaccagtcagagtgtctccga
ccacctcctcctcgtgcttacaggcccaaacgaggcctcaacaagaggcagatgtccatt
agcagttcagaggaggagggagggtccacacccgagtacaccagctgtgaagatgtggag
attgagagcatcagtgaaaaaggtgactgggattgccatcctctagaccccactgtatgg
catcatcctgttacatggcagccttcaaaagagggggatcatttgatcggccgcatcact
ctgagcaagcgctcagccgtgcctcgagaagctggctctctgctcgggctgaaggtggtt
ggtgggaaaattacagagaccgggagacttggagcgttcatcaccaaagtaaagaaagga
agtctcgcagacgttgtaggccatttacgagcaggtgatgaggtgttgcagtggaatgga
aaggcgttgcctggagcaaccaagaaagaagtgtacaacataattttagagtcgcagtcc
gcaccgcaagtggaaatagttgtttcaagaccaattggagacagaccaagacatccagag
aagacacatcctcctcttgaatctactggttccagttctatcgatgagtctcacaaggtg
gaccgtccctccatctccgtcatgtcccccaccagtccgggaatgttgagagatctgcct
caggacctaccaggccagctttcagtgaaattgtggtacgacaaagtgggccatcagctt
atcgtcaacgtattacaagccatagacctgccttctcgtccagacggccgaccacgcaac
ccttacgtcaaaatgtacttccttcctgatcggagtgacaagagcaagaggaggacgaag
acggtgaagaagagcttggaaccaaggtggaaccagacattcctttattcacatgttcac
cgtagggacttcagagagcgcatgctggagatcactgtatgggaccagccgagagcgcag
gaggaggagagcgagttccttggagagatcctgatcgagctcgaaacggctctgttggac
gatcagccgcactggtacaagctgcagacccatgatgtgtcgtctctccctctaccccaa
ccctccccgtacctcccccgcagacacatccacaccgacagccccagcaagaagctgcag
agatctcatcgcatcattgagactgattatgatgatgctattacggtagtgtcttcagca
gcagagaggaactccagagagagggaaaggtgcagcacactgacggttcccgagaggcag
gcagccattcagcatcgctctcgctctgtctccccacaccgagaggaccagagtagagga
cgttcacgccacacacatgtccccatgcagaggagtcttgatgaaattcgccagaaacgg
catcattcccagtcacccactcactactataatccacagcaggagcatcgatctggagac
tcagactatgactactcagaggacagtgaggtcctggagatgcacagatcaatccggggt
ggaagcgctgagtgcctgcacacaaacagctccaccctccctgcatgcctaaagagcaaa
tcaacacggcgactagaagggggtggggtttcacctcgtagccccgccccacagcgtgtg
ctcagatttaccgatgaggtcagcattagtgaccttcagccttctttggacagagtgcga
agtgccagtacaacctgtttgaggcctgagagcagtttccgttcccctgacagagaaagg
ctgtcaggcagtttggacaagcctgtgtgcacaaaaacgaacaagaaatccattgacaat
gacaggatccagcccacctctatcctgcggggcagcaggtggaggagagatggcccaatc
cggccttttgggcactccagccaggacagagcacatctgcatggtggacataactcccct
acagagtctcccttatcagtgcgcaggggtagacagctcccacaactccctgctaagagc
agcagtatcgagcaagctctggcagtagaagagcgagctcggcaggtgagtcagatgcgg
gttccatcgtatcggccaggttcgtctgccagctctgcccacgaacaagacatggatctg
aagaacaagagagatatgtataagaggagctgtgataacatgtcagcgaggtcatcggac
agtgacgtaagtgacgtgtcagccgtctcgcgagccagcagtgcctctcgtctcagcagc
gccagctacatgtctgtccaatcagagaggccacacggacggatcagtcggcaggttcgg
gcctcggcgggccgcagcatgttaaagagcacgagtgtgagcggtgaaatcaacacaccg
gagcgtacagacggcagccagtcggacacagcgctcggcacggtgggcagcagcagcagc
aagaagcgtcgtgccagcctcaatgcccgctttgtagccattgtggggaacaggcgtagc
cgcagcacctcccagatcagccagacagaggcgtccaataaaaagtcaaagggaggtggg
acaatacagcggagccaggagacaggcatggccgtcgagctgcagcacaatatgagtcga
cagccgagtcgcgagtccaacaacggcagcatggccagctacaactccgagggaagtccc
atcttcccagccgtgagggtggacactcagttcagtgacttcctagatggactgggtcct
gcccagctcgtgggccgacaaactctggccactcctgctatcggagacatccagattggc
atggtgaacaagaagggaaagctggaggtggaggtgatccgagcccgtggcctcatccag
aaaccaggatccaagtctcttccggctccgtacgtaaaggtgtacctactggaaaacggg
gcatatgtggccaaaaagaaaacgaaaattgcacggaaaacgctggacccactgtaccag
caaaccctgcagtttgaagagagcccacaagggaaagtgttacaggtcattgtctgggga
gattatggacgaatggaccacaaatctttcatgggagtagcacaaatcctattggaggag
ctggacctggccagcaacgtgattggctggtacaaactgtttccaccctcctctttagta
gaccccacgctagcgtcgctgactaggcgagcttcccagtcatctctggacagttcttca
ggacctggtggggttcgatcctag
DBGET
integrated database retrieval system
