Neoarius graeffei (lesser salmon catfish): 132866349
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Entry
132866349 CDS
T10798
Symbol
xpo1a
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03008
Ribosome biogenesis in eukaryotes
ngra03013
Nucleocytoplasmic transport
ngra03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132866349 (xpo1a)
03008 Ribosome biogenesis in eukaryotes
132866349 (xpo1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
132866349 (xpo1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132866349 (xpo1a)
03009 Ribosome biogenesis [BR:
ngra03009
]
132866349 (xpo1a)
03016 Transfer RNA biogenesis [BR:
ngra03016
]
132866349 (xpo1a)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132866349 (xpo1a)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132866349 (xpo1a)
Ribosome biogenesis [BR:
ngra03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
132866349 (xpo1a)
Pre-60S particles
132866349 (xpo1a)
Transfer RNA biogenesis [BR:
ngra03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
132866349 (xpo1a)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
132866349 (xpo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
BspA_v
Motif
Other DBs
NCBI-GeneID:
132866349
NCBI-ProteinID:
XP_060755065
LinkDB
All DBs
Position
18:complement(58269985..58343897)
Genome browser
AA seq
1151 aa
AA seq
DB search
MPADMTMLADHTARQLLDFTQKLDINLLDNVVNSMYYDVGSQQRLAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPSVV
EKEGVYLAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVSLFTLTMMQLKQMLPL
NTNIRMAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRHLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNV
YKCLSENISSAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LEAVLIDYQRNVPAAREPEVLSTMATIVNKLAAHITAEIPKIFDAVFECTLNMINKDFEE
FPEHRTNFFYLLQAVNSHCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTM
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISI
TLNTGTPVNNQVYVQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKKEKGRGYWFTYLHPSETPFFSATTNLNHLVPSLGFCTVFRSLPVRIRAICSWRSERR
RCVKLRRRNTNSRCPCQESSIPTNSRRKCATEFPMRWDGFSDPAKNRTVNMCVCVRASIQ
TLQSDEDGRGV
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagatatgaccatgttagcggaccatacagcacggcagctgctggacttcact
cagaagctggacatcaacctgctcgacaacgtggtcaactccatgtactacgatgtcggc
tctcagcaacggctggcacaggaagtcctgactaacttgaaggatcacccagatgcatgg
accagagtggacaccatcttggagttctctcagaacatgaagaccaaatactacgccctt
cagattctagagaccgtcattaaaacgcgctggaaaattctcccgagaaaccagtgtgaa
ggaattaagaaatatgtcgtagggctgattatcaagacgtcctcagatccttctgtggtc
gagaaagagggagtttacctggccaagctgaatatgatcttggtgcagatcctgaagcag
gagtggccgaagcactggcccacgttcatcagcgacattgtgggagcgagtcggacgagc
gagagcctctgccagaacaacatgatcatcctgaagctgctcagcgaggaagtgttcgat
ttctccagtggacaaatgactcaggtcaaagccaagcacctgaaagacagtatgtgcaac
gagttctcccagatttttcagctttgccagtttgtcatggaaaattcccagaatgctcca
ctggtccacgctacactggagaccctcctgcgcttcctgaactggattccactgggatac
atttttgagaccaaactcatcagcaccctggtttacaagtttctgaacgttccgatgttt
cgaaacgtgactctgaagtgtctgacggaaatcgctggagtcagcgtcaaccagtacgag
gagcagtttgtcagcctcttcactctaaccatgatgcagctcaaacagatgctgcctctg
aacacgaacatccgtatggcgtactcgaacgggaaagatgacgagcagaacttcatccaa
aacctcagcttgttcctgtgcaccttcctcaaagagcacgggcagctgattgagaagagg
cccaacctgcgggaaacgctcatggaggctctccactatatgctgcttgtgtccgaggtg
gaggagacggagatcttcaagatctgtctggagtactggaaccacctggcggcggagctg
tacagagagagtccgttcagcacctccacctcaccgctgctatctggcagccagcacttt
gatgtgcccccacgcagacatctctatctgcctgtactctccaaggtgcgtctcctgatg
gtgagccgcatggccaaaccagaggaggtgctcgtggtggagaacgatcagggtgaggtg
gtgagggagttcatgaaggacacagactccatcaacctctacaagaacatgagagagact
cttgtctacctgacccatttggactatgcggatacggagaggatcatgaccgagaagctc
cataaccaggtgaacgggacggagtggtcctggaggaacctgaacacgctgtgctgggcc
atcggctcaatcagcggagccatgcacgaggaggacgagaaacggttccttgtcacggtc
attaaggacctgctggggctgtgtgagcagaagagagggaaagacaacaaggccattatc
gcctccaacatcatgtacattgtcgggcagtacccacggttcctccgtgcccactggaag
ttcctcaagacggtcgtcaacaagctcttcgagttcatgcacgagacgcatgacggtgtg
caggacatggcgtgcgacacgttcatcaagattgcgcagaagtgcaggaggcattttgtt
caggtgcaggttggggaggtcatgcccttcatcgacgagatcctgaataacatcaacacc
atcatctgcgatctgcagccgcagcaggtgcatacgttctacgaggctgtaggctatatg
attggtgctcagacagatcaagcagtgcaggagcacctgatagagaagtacatgctgctc
ccgaaccaggtgtgggatagcatcatccagcaggccaccaagaacgtagacatcctgaag
gacccggagacggtgcgtcagctcggcagcatcctgaagaccaacgtgagggcgtgtaag
gctgtcggacacccgtttgtggtgcagctaggacgcatctatctagacatgctcaacgta
tacaagtgtctgagtgagaacatctcgtccgctatccagaccaacggtgagatggtgacg
aagcagcctctaatcaggagcatgcgcacggtgaagagagaaactctgaagctcatctct
ggctgggtcagccgttccaacgatccccagatggtcggggagaacttcgttccccctctg
cttgaagccgtgctgatcgactatcagcggaacgtccctgctgctcgagaacccgaagtg
cttagcaccatggcaacaatcgtcaacaagctcgcagcccatattacggccgaaatcccg
aagattttcgacgctgtatttgagtgcaccttaaacatgatcaacaaggactttgaggag
ttcccagagcacaggacaaacttcttctacctgctgcaggcggtgaactcgcactgcttc
cctgcttttctgtccatcccaccagcgcagttcaagctggtcctggactccatcatctgg
gcctttaagcacaccatgaggaacgtagctgacacaggtctgcagattctgtacacgatg
ctgcagaacgtggcccaggaggaagctgcagctcagagcttctatcagacgtacttctgc
gacatcctgcagcacatcttctccgtcgtcacggatacgtcccacacagcaggtttgacg
atgcacgcctccattctggcctacatgtttaacctagttgaagaggggaaaatcagcata
accctgaacacgggcacccccgtcaacaaccaggtgtatgtacaggaatatgtggccaac
ctgctgaaaaccgccttcccacacctacaagatgcccaggtgaaagtatttgtaactggt
ctattcagcttgaatcaggatattcctgccttcaaagagcaccttcgggacttcctggtg
cagataaagaaggaaaaggggcggggttactggtttacctatctccatccatccgaaaca
ccgtttttctcagcaaccacaaatcttaaccacttggtacccagcttggggttctgtacc
gttttcaggagtttgccggtgaggatacgagcgatctgttcctggaggagcgagagacgt
cgctgcgtcaagctcaggaggagaaacacaaactccagatgtccgtgccaggaatcctca
atccccacgaactcccggaggaaatgtgcgactgagtttcccatgaggtgggacggcttt
tcggacccagcaaagaaccgaaccgtgaacatgtgcgtgtgtgtgcgtgcgtccatacaa
acgttgcagtcggatgaagatggaagaggagtgtaa
DBGET
integrated database retrieval system