KEGG   Neoarius graeffei (lesser salmon catfish): 132866349
Entry
132866349         CDS       T10798                                 
Symbol
xpo1a
Name
(RefSeq) exportin-1 isoform X1
  KO
K14290  exportin-1
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03008  Ribosome biogenesis in eukaryotes
ngra03013  Nucleocytoplasmic transport
ngra03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    132866349 (xpo1a)
   03008 Ribosome biogenesis in eukaryotes
    132866349 (xpo1a)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    132866349 (xpo1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ngra03019]
    132866349 (xpo1a)
   03009 Ribosome biogenesis [BR:ngra03009]
    132866349 (xpo1a)
   03016 Transfer RNA biogenesis [BR:ngra03016]
    132866349 (xpo1a)
   03036 Chromosome and associated proteins [BR:ngra03036]
    132866349 (xpo1a)
Messenger RNA biogenesis [BR:ngra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     132866349 (xpo1a)
Ribosome biogenesis [BR:ngra03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    132866349 (xpo1a)
  Pre-60S particles
    132866349 (xpo1a)
Transfer RNA biogenesis [BR:ngra03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    132866349 (xpo1a)
Chromosome and associated proteins [BR:ngra03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     132866349 (xpo1a)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd BspA_v
Other DBs
NCBI-GeneID: 132866349
NCBI-ProteinID: XP_060755065
LinkDB
Position
18:complement(58269985..58343897)
AA seq 1151 aa
MPADMTMLADHTARQLLDFTQKLDINLLDNVVNSMYYDVGSQQRLAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPSVV
EKEGVYLAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVSLFTLTMMQLKQMLPL
NTNIRMAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRHLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNV
YKCLSENISSAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LEAVLIDYQRNVPAAREPEVLSTMATIVNKLAAHITAEIPKIFDAVFECTLNMINKDFEE
FPEHRTNFFYLLQAVNSHCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTM
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISI
TLNTGTPVNNQVYVQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKKEKGRGYWFTYLHPSETPFFSATTNLNHLVPSLGFCTVFRSLPVRIRAICSWRSERR
RCVKLRRRNTNSRCPCQESSIPTNSRRKCATEFPMRWDGFSDPAKNRTVNMCVCVRASIQ
TLQSDEDGRGV
NT seq 3456 nt   +upstreamnt  +downstreamnt
atgccagcagatatgaccatgttagcggaccatacagcacggcagctgctggacttcact
cagaagctggacatcaacctgctcgacaacgtggtcaactccatgtactacgatgtcggc
tctcagcaacggctggcacaggaagtcctgactaacttgaaggatcacccagatgcatgg
accagagtggacaccatcttggagttctctcagaacatgaagaccaaatactacgccctt
cagattctagagaccgtcattaaaacgcgctggaaaattctcccgagaaaccagtgtgaa
ggaattaagaaatatgtcgtagggctgattatcaagacgtcctcagatccttctgtggtc
gagaaagagggagtttacctggccaagctgaatatgatcttggtgcagatcctgaagcag
gagtggccgaagcactggcccacgttcatcagcgacattgtgggagcgagtcggacgagc
gagagcctctgccagaacaacatgatcatcctgaagctgctcagcgaggaagtgttcgat
ttctccagtggacaaatgactcaggtcaaagccaagcacctgaaagacagtatgtgcaac
gagttctcccagatttttcagctttgccagtttgtcatggaaaattcccagaatgctcca
ctggtccacgctacactggagaccctcctgcgcttcctgaactggattccactgggatac
atttttgagaccaaactcatcagcaccctggtttacaagtttctgaacgttccgatgttt
cgaaacgtgactctgaagtgtctgacggaaatcgctggagtcagcgtcaaccagtacgag
gagcagtttgtcagcctcttcactctaaccatgatgcagctcaaacagatgctgcctctg
aacacgaacatccgtatggcgtactcgaacgggaaagatgacgagcagaacttcatccaa
aacctcagcttgttcctgtgcaccttcctcaaagagcacgggcagctgattgagaagagg
cccaacctgcgggaaacgctcatggaggctctccactatatgctgcttgtgtccgaggtg
gaggagacggagatcttcaagatctgtctggagtactggaaccacctggcggcggagctg
tacagagagagtccgttcagcacctccacctcaccgctgctatctggcagccagcacttt
gatgtgcccccacgcagacatctctatctgcctgtactctccaaggtgcgtctcctgatg
gtgagccgcatggccaaaccagaggaggtgctcgtggtggagaacgatcagggtgaggtg
gtgagggagttcatgaaggacacagactccatcaacctctacaagaacatgagagagact
cttgtctacctgacccatttggactatgcggatacggagaggatcatgaccgagaagctc
cataaccaggtgaacgggacggagtggtcctggaggaacctgaacacgctgtgctgggcc
atcggctcaatcagcggagccatgcacgaggaggacgagaaacggttccttgtcacggtc
attaaggacctgctggggctgtgtgagcagaagagagggaaagacaacaaggccattatc
gcctccaacatcatgtacattgtcgggcagtacccacggttcctccgtgcccactggaag
ttcctcaagacggtcgtcaacaagctcttcgagttcatgcacgagacgcatgacggtgtg
caggacatggcgtgcgacacgttcatcaagattgcgcagaagtgcaggaggcattttgtt
caggtgcaggttggggaggtcatgcccttcatcgacgagatcctgaataacatcaacacc
atcatctgcgatctgcagccgcagcaggtgcatacgttctacgaggctgtaggctatatg
attggtgctcagacagatcaagcagtgcaggagcacctgatagagaagtacatgctgctc
ccgaaccaggtgtgggatagcatcatccagcaggccaccaagaacgtagacatcctgaag
gacccggagacggtgcgtcagctcggcagcatcctgaagaccaacgtgagggcgtgtaag
gctgtcggacacccgtttgtggtgcagctaggacgcatctatctagacatgctcaacgta
tacaagtgtctgagtgagaacatctcgtccgctatccagaccaacggtgagatggtgacg
aagcagcctctaatcaggagcatgcgcacggtgaagagagaaactctgaagctcatctct
ggctgggtcagccgttccaacgatccccagatggtcggggagaacttcgttccccctctg
cttgaagccgtgctgatcgactatcagcggaacgtccctgctgctcgagaacccgaagtg
cttagcaccatggcaacaatcgtcaacaagctcgcagcccatattacggccgaaatcccg
aagattttcgacgctgtatttgagtgcaccttaaacatgatcaacaaggactttgaggag
ttcccagagcacaggacaaacttcttctacctgctgcaggcggtgaactcgcactgcttc
cctgcttttctgtccatcccaccagcgcagttcaagctggtcctggactccatcatctgg
gcctttaagcacaccatgaggaacgtagctgacacaggtctgcagattctgtacacgatg
ctgcagaacgtggcccaggaggaagctgcagctcagagcttctatcagacgtacttctgc
gacatcctgcagcacatcttctccgtcgtcacggatacgtcccacacagcaggtttgacg
atgcacgcctccattctggcctacatgtttaacctagttgaagaggggaaaatcagcata
accctgaacacgggcacccccgtcaacaaccaggtgtatgtacaggaatatgtggccaac
ctgctgaaaaccgccttcccacacctacaagatgcccaggtgaaagtatttgtaactggt
ctattcagcttgaatcaggatattcctgccttcaaagagcaccttcgggacttcctggtg
cagataaagaaggaaaaggggcggggttactggtttacctatctccatccatccgaaaca
ccgtttttctcagcaaccacaaatcttaaccacttggtacccagcttggggttctgtacc
gttttcaggagtttgccggtgaggatacgagcgatctgttcctggaggagcgagagacgt
cgctgcgtcaagctcaggaggagaaacacaaactccagatgtccgtgccaggaatcctca
atccccacgaactcccggaggaaatgtgcgactgagtttcccatgaggtgggacggcttt
tcggacccagcaaagaaccgaaccgtgaacatgtgcgtgtgtgtgcgtgcgtccatacaa
acgttgcagtcggatgaagatggaagaggagtgtaa

DBGET integrated database retrieval system