Neoarius graeffei (lesser salmon catfish): 132866355
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Entry
132866355 CDS
T10798
Symbol
nup133
Name
(RefSeq) nuclear pore complex protein Nup133
KO
K14300
nuclear pore complex protein Nup133
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132866355 (nup133)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132866355 (nup133)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132866355 (nup133)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132866355 (nup133)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132866355 (nup133)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
TetR_C_18
Motif
Other DBs
NCBI-GeneID:
132866355
NCBI-ProteinID:
XP_060755074
LinkDB
All DBs
Position
18:58800690..58886303
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AA seq
1139 aa
AA seq
DB search
MFTPRGASGSGRRHTARTGGRKSINTPSGLLFSPRRASLTPGRATPTRVQSCATVDSDHF
DVQTFGSSLPVKVMEALTTAEAGEQISVKVEESGWAWMVCGERVIIWKICQTAVAKLSVC
KDLQLSPSDYAYSAELISISSSSPLESASVQSVCVLAVSPDGLARFWPSLSHEGTYTETH
ADLGGHPCNYVTAVRGGSFIVSSYRGQLLRMGMEPSGKLYQRPVQQGHGMLSGIGRRVSS
LFGLRSPPADTAVHSVLWVPDSGCLYALSTCGLNKWEVGDTTEVQVLSWNACPSLSDSIA
DAIWGSESNYAEMKVGVNVAYLDMQLSHAGLVVLAAAWHPADTPCLAYFCLVTIPDTTLP
VSEELSVEVTKYNPPFQSEDELHKTRLVLPRVKSPAAYLYNEELVYSCTTGAGRSGLPEE
KLTFNASGDRIRGGGVCADLPVFFSQINGLVAVVPRESASILPETMEDSLCTSLAGPGPE
GTSLETPPKMDTVAQEDKTKLLKQAFLEFCRNRVMEAQKMTDELFPEDGEGGTRGELDTL
VTQIDLDLVDDYPASDPRWAESVPDENAGFTLTSLILLHQLEDKMKAHHCFMDFLLQTGL
LDQLTTTTVRSSPMATRLVLCEHAEKLSAAVALKNHHSKQPELVNTAIIATLRKNGMSMP
SSLTPADVFFREVSQISSIFESLLDEEEKCLKENPVTSVKWAEVVLNVNNIVKDMLQAAA
QYRETKASLYRASENASPEPEYIPWTASGGVGGVRTVIARQHDVILHSVYPHADSGLRNA
LSEQLVALLDSLLSGYVAQLTSLRRPGQQERYDALEMEYTQRRSELLTPLLELGQYQWVA
ALAEKYCDFDILVQMCEQTDNQARLQHYMTKFADQNFADFLFRWYMEKGKRGKLLSQPIA
QHQQLASFLQAHEHLSWLHHIHVQDFQSAHHTLYSQANTETRYFSKKKTLLALSKLTALA
SDMPEPLQRKQVNDIVEQERFLLHQETLPKQLLEDKQQNPDTMPLLTAHNLINLYICDEN
RGADEYDFKKALDLLEYIDKEDAVDITALKCAILSKALKKDWKENWSASDGSDDPLEAAR
DSIFVKILQKLIQEGIPLQEYLPDVKELLQVDELDFLKSKPFFEFLLRANYEHFIQSQI
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtttactccccgcggagcctcaggctcgggacgccgacacacagcgaggaccggcggc
aggaaaagcatcaacacgccgtcaggactgctgttctccccgcgcagagcttccctcact
ccgggccgagcgactcccacccgggtgcagagctgtgccacggtggactctgaccatttc
gatgtgcagacgttcgggtcgtctctgcctgtcaaggtgatggaggctctgaccacggca
gaagcaggtgagcagatctcggtgaaggtggaggaatcgggttgggcgtggatggtgtgt
ggagagcgggtgatcatatggaagatctgtcagactgcagtagcgaagctgtctgtgtgt
aaggacctgcagttatcccctagtgattatgcctacagcgctgaactcatctccatcagc
tcatcctctccgctggagtcggcgtcggtgcagtcggtgtgtgtgctggccgtgtctccg
gatggtttggcccggttctggcccagcctgtcccacgaggggacgtacacagagacgcac
gctgacctgggaggacacccgtgtaactacgtgactgcagtcaggggaggcagcttcatc
gtgtcctcgtaccgcgggcagctgctgcggatgggcatggagccttctggaaagctctat
cagcggccagtgcagcagggacacgggatgctctccgggatcggccgccgcgtctccagt
ctgttcggcctccgcagccctccagccgacacggccgtgcacagtgtattgtgggtgccg
gactcgggatgcctctacgctctcagtacgtgcggcttgaataagtgggaggtcggggac
accacggaggttcaggtgctgagctggaacgcctgcccgagcctctccgacagcatcgct
gacgctatctggggttcggagagcaactacgctgagatgaaggtgggagtaaacgtggcg
tatctggacatgcagctcagtcacgccggtttggtggtgttggctgcagcgtggcatcct
gctgatactccgtgtttggcgtatttctgtttggtcacgatcccagacaccacactgcct
gtgtcagaggagctctctgtagaggtcacgaagtacaacccaccgtttcagagcgaggat
gagctccataagacgcggttggttttgccgcgggtgaagagtcctgcagcgtatctctat
aatgaggagctggtgtactcgtgcaccaccggtgctgggcgcagtggacttccagaggaa
aagctcacctttaatgcctctggtgaccgtatccgtggtggcggcgtgtgtgccgacttg
cccgttttcttttcccagattaacggcctggttgccgtggtacccagagagagcgcctcc
atcttgccagagaccatggaggattctctgtgtacttcactggccggacctgggcctgag
gggacgtcactggagacaccacccaaaatggacacagtagcacaagaggacaaaacaaag
ctgctgaaacaagccttcctcgagttctgtcgtaatcgtgtaatggaggcccagaagatg
acggacgagctcttccctgaagacggagagggcgggacacgaggggagctggacacactg
gtgactcagatcgacctggacctggtggatgattatcctgcgtcggatcctcgctgggcg
gagtccgtacctgacgagaacgcgggcttcactctgacctcgctgatcttgctgcaccag
ctggaggacaaaatgaaagctcaccactgcttcatggacttcctgctgcagaccgggctc
ctggaccagctcaccacgacgacggtgcgctcgtctcccatggcgacgcggctggtgcta
tgcgaacacgcggagaagctgtcggcggccgtcgcgctgaagaaccaccacagcaagcag
ccggagctggtgaacaccgccatcatcgccacgctgaggaaaaacggcatgagcatgccg
tccagcctcacgcctgctgacgtcttcttcagagaggtgtctcagatctcctcgatcttc
gagtctctgctggatgaggaggagaagtgtctgaaggagaatcctgtgacctcggtgaag
tgggctgaagtcgtgctcaacgtcaacaacatcgtcaaggacatgctccaagcagcagcg
cagtacagagagactaaagcgtccctctacagagcatcagaaaacgcctctccagagccg
gagtacatcccgtggacggcctcaggtggagtgggcggagttcgtacagtcatcgcccgg
cagcatgacgtgatcctgcacagtgtgtatcctcacgctgactcaggactccgtaacgct
ctcagcgagcagctggtggcgctgttggactcgctgctcagcggctacgtggcccagctc
acctcactacgtcgccccgggcaacaggagcgctacgacgccctggagatggagtacacg
cagcgtcgttctgaactgctcacgcccctgctggaactgggtcagtatcagtgggtggcg
gctctggctgaaaagtactgcgattttgacatcctggtgcagatgtgcgagcagacggac
aaccaggctcgcctgcagcactacatgactaaattcgctgaccagaactttgctgacttc
ctgttccgctggtacatggagaaggggaagcgagggaagctgctgtctcagcccatcgct
cagcatcagcagctcgccagcttcctgcaggcccacgaacacctgagctggctgcaccac
atccacgtgcaggacttccagagtgcccaccacaccctgtacagccaggccaacacggag
acgcgctacttcagcaagaagaaaactctactcgcgctgagcaaactcacggctctggcc
tcagacatgcccgagccgctgcagcgcaaacaggtcaacgatattgtggagcaggagcgc
ttcctccttcatcaggagactcttcccaaacagctgctggaggacaagcagcagaaccca
gacaccatgcctctactgactgctcacaaccttattaatctgtatatatgtgatgaaaac
cgtggcgctgatgagtacgacttcaagaaagccctcgacctgctggagtacatagacaag
gaagacgctgtagatattacagctctgaagtgtgcaattctcagcaaagccttgaagaaa
gactggaaagagaactggtcagcctcagacggcagcgatgatcctctggaggcggcgaga
gacagcatctttgtgaaaattctccagaaactcattcaagaaggcattcccctgcaagag
tacctgcccgatgtgaaggagttgctgcaggtagacgagttggactttctcaaatcgaaa
cccttcttcgagttcttactgagagccaactacgagcacttcatccagtctcagatctga
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