Neoarius graeffei (lesser salmon catfish): 132866736
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Entry
132866736 CDS
T10798
Symbol
msx1b
Name
(RefSeq) homeobox protein MSH-B
KO
K09341
homeobox protein MSX
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132866736 (msx1b)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
132866736 (msx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
132866736
NCBI-ProteinID:
XP_060755503
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All DBs
Position
18:complement(38585644..38588142)
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AA seq
271 aa
AA seq
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MTSPQGPVDSEASPRDRTDSEGEESRGRDATGSAEDKTKASRHPFSVESLISKKSTCSRS
AYSPSPPAPFPEHLGHYSSQRTYFPQKSPGSGETFPHHHVSVSDCMNDESEDSSDKEQST
WLKSPTFSSPQRAASPPSTCHLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAE
FSSSLSLTETQVKIWFQNRRAKAKRLHEAELEKLKLAAKPALPAALAALPFSLAAHAPPA
AVYGAATSALPRPSLAVPALFGSPYGMYYLS
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgacttctcctcagggaccggttgactctgaagcctcgccccgggacaggacggactcc
gagggcgaggagagcagaggcagggacgcgacggggagcgcagaggacaagaccaaagcg
agccgccaccctttcagtgtcgagtccctcatctccaagaagagcacctgcagcaggagc
gcgtactctccttcacccccagcgcctttcccggaacatctgggacactactcttctcag
aggacttacttcccacagaaaagtccaggttcaggagaaactttcccccatcaccatgtg
tctgtatcggactgcatgaacgacgagagcgaagactcgagtgataaggagcagagcact
tggctcaagagcccaactttctcatcaccacagagagctgcaagtcctccgtcgacgtgc
cacctgcgcaagcacaagaccaaccggaagcctcggaccccgttcactacggcgcagctg
cttgctctagagcggaagttccgccagaagcagtacctgtcgatcgccgagcgcgccgag
ttctccagctctctgagcctcaccgagacgcaggtgaagatctggttccagaacagacgc
gccaaggccaagcggctgcacgaagccgagctggagaagctgaagctggctgctaaaccc
gctctgcccgccgctctggccgctctgcccttctctcttgccgcgcacgcgcctccggca
gctgtgtacggcgccgccacgtccgcgctcccgcgcccgagcctcgccgtgcccgcgctc
ttcggctcgccttatggaatgtattacttatcataa
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