KEGG   Neoarius graeffei (lesser salmon catfish): 132866746
Entry
132866746         CDS       T10798                                 
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b isoform X1
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:ngra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ngra03000]
    132866746 (sox1b)
Transcription factors [BR:ngra03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    132866746 (sox1b)
SSDB
Motif
Pfam: HMG_box SOXp HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 132866746
NCBI-ProteinID: XP_060755510
LinkDB
Position
18:complement(44151676..44152713)
AA seq 342 aa
MYSMMMETDLHSPAPQTNTSAGPNAAGKLNQERVKRPMNAFMVWSRGQRRKMAQENPKMH
NSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYSL
AGGLLTSSTSGGGVTLGMSTAQRLESPAGHGGGGAGAASYAHVNGWANGAYTAAAAAAMM
QEAQLAYGQHASAGAAHHHGHHPHHHGHHHPHHQHAASAQSVHRYDMSALQYSPMSNSPS
YVSASPSTYAAMSYTQHQSSVSAAAGSVGTLGSLVKPEPSASPPLGAASRAPCPGDLREM
ISMYLPAAEAGDAAVQSRLHALPQHYQSTAAAINGTVPLTHI
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgtatagcatgatgatggagacggacttgcattccccggcaccccaaacaaacacgagt
gcggggccaaacgctgcagggaaactgaaccaggagcgcgtcaagcgccccatgaatgcg
ttcatggtgtggtcccgtgggcagcgacggaagatggcacaggagaaccccaaaatgcac
aactcggagatcagcaagaggcttggggccgagtggaaggtcatgtcggaggcagagaag
cggcctttcattgatgaggcgaagcgcctgcgcgctatgcacatgaaggagcatccggat
tacaagtaccggccgcgcagaaagaccaaaactctgcttaaaaaggacaaatactctctg
gccggcgggctgcttacaagttctaccagcggtggcggggtgactctgggtatgagcacg
gcgcagaggttggagagtccggcgggtcacggcggcggaggcgcaggcgcggcgagttac
gcgcacgtgaacggctgggcaaacggtgcgtatacagcagccgcggctgcagccatgatg
caggaggcgcagttagcctacgggcagcacgcaagcgctggggccgctcaccatcacgga
caccacccgcatcaccacggacaccaccacccgcaccatcagcacgccgcaagcgcgcag
tccgtgcaccgctacgacatgagcgcgctgcagtacagccccatgtcgaactctccgagc
tacgtaagcgcctcgccgtccacctacgccgccatgtcgtacacgcagcaccagagctcc
gtctcagcggctgcaggaagcgtcggcacgctcggatcgctcgtgaagcccgagccgagc
gcaagccctccgcttggcgccgcgtcccgcgcgccctgtcccggtgacctgcgcgagatg
atcagcatgtacttaccggcggcggaagctggagacgcggctgttcagagcagactgcac
gcgctgccgcaacactatcagagcactgcagctgccattaacggaaccgtcccactgacg
cacatttaa

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