Neoarius graeffei (lesser salmon catfish): 132866994
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Entry
132866994 CDS
T10798
Symbol
stag1b
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
132866994 (stag1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngra03036
]
132866994 (stag1b)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
132866994 (stag1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
132866994
NCBI-ProteinID:
XP_060755640
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All DBs
Position
19:12864996..12931829
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AA seq
1260 aa
AA seq
DB search
MINSEFPILQDSSNESGQGDTVSLSLSVSELEDTGEGKGKKKRGRPGRPPQAASKKARKS
PVDKGGRRPNGMAQQNGDGGDPTTLFEVVKLGKSAMQSVVDDWIESYKQDRDMALLDLIN
FFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTIAGPQWKKFRYNFCEFI
GVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSI
NQDNTQRQYEAERNKVAGKRATDKLELLLEKRKELQENQDEIENMMNSIFKGIFVHRYRD
AIAEIRAICIEEIGVWMKLYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQTLYTNRG
LFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEDALSNEDCENVYHLVYS
AHRPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRNSPNGNLIRMLVLFFLESELHEHAA
YLVDSLWDSSQELLKDWDCMIELLLEEPVQGEEVLGDRHESALIELMVCTIRQAAEAHPP
VGRGTGKRVLTAKEKKTQIDDKNKLTEHFIIALPMLLSKYQADAEKVANLLQIPQYFDLE
VYSSGRMEKHLDALLKQIKLVVEKHTETEVLEACSKTYSILCSEEYTIMNRVDIARSQLI
DELSDRFNHSVEDLLQEGDEADDDDIYSVLSSLKKLTAFHNAHDLTKWDLFKNCYRLLKM
GIEQGSMPEQIAVQALQCSHYSILWQLVRITEGSPSKDDLLALRRVVKSFLAVCQQCLSN
VNTPVKEQAFMLLCDLLMIFSHQLTTGSREALQPLVFNPDNTLQSELLSFVLDHVFIDQD
DENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMPAAADIFKHYMKYYNDYGD
IIKETLSKTRQTDKIQCAKTLILSLQQLFNELVQDQGPNLDRTSSHVSGIKELARRFALT
FGLDQIKTREAVATLHKDGIDFAFKFPNPKGADYPPPNLAFLEVLCEFSSKLLRQDKKTV
HSYLEKFMTEYMMERREDVWLPLIAYRNSLLTGGDEDRMSVTTGSTTSRASTVRSKRGRP
PLHKKRTDAAADESIDSSWVMRNDTIQTPGGLQTPQLTSTVLRENPRQAAEHVPDQDSSE
PGSEPDYIHNPQMQMSWLDQQKMEEVNRKERGGMNYMKARSGGVRQQVRGLMEDDAEPIF
EDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSTAIIEDDSGFGMQMF
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgattaactcggagttccccattttacaggattcgtctaatgagtcaggacagggagac
acggtgagtctgagtctgagcgtcagtgagctggaggacactggagagggaaaagggaag
aagaagagaggacggccaggaagacccccgcaagcagccagtaagaaagctcgtaagtct
ccagtagacaaggggggcaggaggccgaatggcatggcacagcagaacggagacggcgga
gaccccactacactgtttgaggtggtcaaactgggcaagagcgccatgcagtccgttgtt
gatgactggatcgagtcatacaaacaggaccgagatatggctcttctggatctgatcaac
ttcttcatacagtgctctgggtgtaaaggtactgtaagaattgagatgttcagaaatatg
cagaatgcagaaattatcagaaagatgacagaagagtttgatgaggatagtggtgattac
ccgctcaccatcgctgggcctcagtggaagaagttccgctataacttctgcgagttcatt
ggtgttctgatccgtcaatgtcagtacagtattatctatgatgagtacatgatggacacc
gtcatctcgctcctcactggcctgtccgactcgcaggtccgagccttcagacacacctcc
accctcgcagcgatgaagctgatgacggcactggtgaacgtggctctgaacctcagcatc
aaccaggacaacacgcagagacagtacgaggccgagcggaacaaagtcgctgggaaaaga
gccaccgacaagctggagctgctgctggagaagaggaaggagttgcaagagaaccaagat
gagattgagaacatgatgaactccatcttcaaaggaattttcgttcatcgctacagagat
gcgattgctgagatcagagctatctgcattgaagagatcggcgtgtggatgaagctgtac
agcgacgcctttctcaatgacagctatcttaagtatgtgggctggacattgcacgaccgg
caaggagaagtccgactcaagtgtctcaaagcacttcagacgctctacacaaacagagga
cttttccccaaactggaactcttcactaatcgctttaaggaccgtattgtctcaatgact
ctagataaagagtacgatgtagccgtggaggcgattcgcctcgtcactctgatcctgcat
ggcagtgaggatgctctctctaatgaagactgtgagaacgtctatcacctggtctactct
gcccatcgacctgtcgctgtggctgcaggagagttccttcacaggaagctgttcagtcga
catgacccgcaggcggaggaggctctcgctaaacgccgtggcaggaacagccctaatggc
aacctcatcagaatgctggtgctcttcttcctcgagagtgagcttcatgagcatgcagca
tatctggtggacagtttgtgggacagctctcaggaactgctaaaggactgggactgtatg
attgagctgctgctggaggaacctgtacagggagaggaagtgctgggagacagacatgag
agcgctctgattgagttaatggtgtgcaccatcagacaagcggctgaggctcacccccct
gtgggccggggaacagggaagagggttctcactgctaaagaaaagaaaactcagattgat
gataagaacaaactgaccgagcacttcatcattgcattgcccatgctgctgtcaaagtat
caggcagatgctgaaaaagtggctaacctcctgcagatccctcagtactttgacctggag
gtgtacagctccggccgaatggaaaagcatctagatgcccttctgaagcagatcaagctg
gtggtggagaagcatacggagacagaagttttggaggcatgcagtaagacgtacagcatc
ctgtgcagtgaggaatacaccatcatgaaccgtgtggacatcgcccggagccagctcatt
gacgagctctccgaccgcttcaaccactctgtggaggacctgctgcaggagggagatgaa
gctgatgatgatgacatctacagtgttctctcatccctgaagaaactcactgctttccat
aatgctcacgacctaacgaagtgggacttgtttaaaaactgctaccggttgctgaagatg
gggatagagcagggctcgatgccagagcagattgcagtgcaggctcttcagtgttctcat
tactccatcctttggcagctggtgcgcatcactgagggttctccatccaaggatgacctt
ctcgctctcagaagagtggtgaagtccttcttggccgtgtgtcagcagtgtctgtcaaat
gtgaacactcctgtgaaagaacaggcgttcatgctgctgtgtgacctgctgatgatcttc
agtcaccagctgaccacgggaagcagagaggccctgcagccactggtgtttaatcctgac
aacacgctacagagtgagctgctcagcttcgtgctcgatcatgtctttatcgaccaggac
gatgaaaaccagagcatggagggtgatgaggaagatgaagcaaataaaattgaggcttta
cacaagaggaggaatctgctcgctgccttcagtaagctgatcatttatgatatagtggac
atgcccgcggcagcagacatctttaaacactatatgaagtactataatgattatggtgat
atcatcaaggagaccctgagtaagaccagacagacagataagatccagtgtgccaaaact
ctcatactcagtttgcagcagctctttaatgagcttgtgcaggatcaggggccaaatttg
gaccgaacttcttcccatgtgagtggcattaaagagctggctcgccgttttgctctgact
ttcggactggaccaaatcaaaactagagaggctgtggcgactttgcacaaggatggaatc
gattttgcattcaagtttccgaaccctaaaggagcagactatcctccacccaacctggct
ttcttggaagtgttgtgcgagttctcctcaaaactcctccgtcaggataaaaagactgtc
cactcgtacctggagaagttcatgacggagtatatgatggagcggagggaggatgtgtgg
ttgccactgatcgcctacaggaactctctgctaacgggaggtgatgaggaccgcatgtct
gtgacgacgggcagcacgacgagccgagccagcaccgtacgcagcaagaggggccgaccg
ccactacataagaaacgtactgatgcagcagcagacgagagcatagatagctcatgggtg
atgcgtaatgacacaattcagactcctggaggtctgcagacaccgcagctcacctccaca
gtgctaagggagaacccacgccaagcagcagaacacgtccctgaccaggactcatctgag
cctggctctgaacctgactacattcacaatccacagatgcagatgtcatggctggaccag
cagaagatggaggaggtaaacaggaaagagagaggaggaatgaactacatgaaggcgcgg
agtggaggcgtacggcaacaagtgcggggcttaatggaggacgatgctgagcccatcttc
gaggatgtgatgatgtcatcgcgtggacaattggaggacatgaatgaggagtttgaggac
accatggtgatagatctgccgccatcgagaaacagacgtgagagagccgaactcagaccg
gacttttttgactctacagcaattatagaagatgattcaggatttggtatgcagatgttt
tga
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