Neoarius graeffei (lesser salmon catfish): 132867092
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Entry
132867092 CDS
T10798
Symbol
pan3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132867092 (pan3)
mRNA degradation factors
3'-5' decay
Pan complex
132867092 (pan3)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132867092
NCBI-ProteinID:
XP_060755799
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Position
19:complement(20188293..20249989)
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AA seq
819 aa
AA seq
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MNSGLPVSAAPLGGVGIPGVKVKFCRYYAKDKTCFYGEDCQFLHEDPSAAGAVHGGGGAV
APPAAVAAGGGGGGGSGSPVTLALAGGAVSTAAGAVAGYPLAANAVATCPSGAPAVVAKK
SDALGPAGAPLDGQLLSIAGMDGGALSDANLTNSYFSSSFIGVNGFGSPAESKYSMMQRM
TSSSSSPSLLNDGAKNFSHSTHDPVSSPTSSLFSDFGALSITQRRKAPNPAATEFIPKGA
PRMSTMSQVAVPTFPSPLFPHPGLSSSAAAGLAPGMSLSAGSSPLHSPKITPHTSPAPRR
RSHTPNPANYMVPTTASEQGGAAHIIQKETVGGTTYFYTDNTPAPMAGMVFPTYHIYPQT
APHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQSENPGVPTEVDSYHSLFPLEP
LLPPNRLQKTSNFSYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMMLVDMWKKIQHSN
AVTLREVFTTKAFGDHSLVFSYDFHAGAETMYSRHFNDPTADSFFTKRKWGPHEPPPPRQ
HAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPSKILITGKTRLRVNCVGVFDVLTF
DNSQTNHLALMPQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELVSINYSSDLKNL
ILYLLTEQSRLRSVNDVMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLG
TINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGTPWVDLSHIVSCLNKLDAGVPE
KISLVSRDEKSVLVVTYSDLKRCFDNTFQELLAAANGSL
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtggactcccggtctcggctgctccgctcggcggtgtcggaataccgggcgtc
aaggtgaaattctgccgctattacgcgaaagacaagacttgcttttatggcgaggattgc
cagttcttgcacgaggatccgtccgcggctggtgctgtgcacggtggaggaggagcagta
gcaccgccagcagcagtagcagcaggaggaggcggaggaggaggcagcggcagcccggtg
actttagccctcgccggcggggcagtgagcacagcggcgggggctgtagcagggtatccg
cttgctgcgaacgctgtagcgacgtgtccgagcggagctccggccgttgtcgccaaaaag
agtgatgctctcgggcctgcaggagcgcctctggacggccagttgttgagcatcgctggg
atggacggtggggcgctcagtgatgcgaatctgaccaactcctatttcagcagcagcttt
attggagtcaatgggtttggaagcccagcagaatccaaatactcaatgatgcagaggatg
accagcagcagcagctccccgagtctccttaatgatggtgccaagaatttcagccacagc
actcatgatcctgtaagttcccccacttcctccctgtttagcgactttggtgctttgagt
ataacgcagaggagaaaggctcctaaccccgctgccacagagttcatccctaaaggagca
ccacgcatgtccacgatgtctcaggtggccgtaccgacatttccctcaccgctgttccct
catcctggtctgagcagctcagccgcagcaggactcgctccaggtatgtctttgtctgct
gggtcgtctcctctccactcgcccaaaatcactccccacacctcacctgccccccggcgc
cgtagccatacccctaacccagccaattacatggtgcccaccacggcgtcggagcaagga
ggcgctgcccacatcatccaaaaggagactgtaggcggaaccacgtacttttacactgac
aacacgcctgctcccatggctggaatggtatttccaacgtaccatatctacccacaaaca
gcacctcatgtggcgtacatgcagcccaaagccaacgctccatccttctttatggctgac
gagctcagacaggagttaattaacaggcatttgataacgatggcccagattgatcagtct
gagaacccaggagtcccgactgaggtggacagctaccatagccttttccccctggagcct
cttctgccccccaaccgcctccagaaaaccagcaacttcagttacatcacttcctgttac
aaagcagtcaacagcaaagatgacctgccttactgcctcaggaggatacatggcttcagg
ctggtgaacaccaagtgcatgatgctggttgacatgtggaagaagatccagcactccaat
gctgtcactctccgagaagtctttaccaccaaggcttttggagatcactcattggtgttc
tcttacgacttccatgctggggctgagaccatgtatagcaggcacttcaacgacccaact
gctgactcttttttcaccaagaggaagtggggtccgcatgagcctccgcctcctcggcaa
catgccggtctgctgcccgagtctctgatctgggcatacatcgtgcagctgagctcggcc
ctgcgtaccatccacactgctggcctggcatgcagagtcatggaccccagcaagatcctc
atcactggaaagactcggttacgggttaactgtgtaggagtgtttgatgtcttaacattt
gacaatagtcagaccaaccatttggccctcatgccccagtaccagcaagcagatctgatc
tctctggggaaggtggtgttggcactggcctgcaactctctggctggcattcagagagag
aacctccagaaagccatggagctcgtgtccatcaactactcatccgacctcaagaacctc
atcctgtacctgcttacggagcagagtcgcctgcgcagcgtcaatgacgtcatgcccatg
atcggagccaggttttacactcagctggacgcttcacagatgaggaatgatgtcattgag
gaggatctggccaaggaagtgcagaacggccgcttgttccgccttctggccaaactggga
accatcaatgagagaccagaattccagaaggatccgacgtggtcggagacaggggatcgc
tacctgctgaaactcttcagagatcacctgttccaccaggtgactgaagcaggcacgccc
tgggtcgacctgagccacattgtgtcttgtcttaataaactggatgccggagtgcccgag
aagatcagcctggtgtctcgggatgagaagagcgtgctggtggtgacctattcggaccta
aagcgctgctttgacaacaccttccaggaactgctggctgctgccaacggctcgctgtag
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